Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS42385 and QEN71_RS42390 are separated by 438 nucleotides QEN71_RS42390 and QEN71_RS42395 are separated by 71 nucleotides
QEN71_RS42385: QEN71_RS42385 - hypothetical protein, at 555,369 to 555,977
_RS42385
QEN71_RS42390: QEN71_RS42390 - nitrogenase iron protein, at 556,416 to 557,297
_RS42390
QEN71_RS42395: QEN71_RS42395 - nitrogenase molybdenum-iron protein alpha chain, at 557,369 to 558,832
_RS42395
Position (kb) 556
557
558 Strain fitness (log2 ratio) -2
-1
0
1 at 555.556 kb on + strand, within QEN71_RS42385 at 555.586 kb on + strand, within QEN71_RS42385 at 555.586 kb on + strand, within QEN71_RS42385 at 555.604 kb on + strand, within QEN71_RS42385 at 555.655 kb on + strand, within QEN71_RS42385 at 555.655 kb on + strand, within QEN71_RS42385 at 555.709 kb on + strand, within QEN71_RS42385 at 555.710 kb on - strand, within QEN71_RS42385 at 555.723 kb on + strand, within QEN71_RS42385 at 555.724 kb on - strand, within QEN71_RS42385 at 555.882 kb on - strand, within QEN71_RS42385 at 557.106 kb on + strand, within QEN71_RS42390 at 557.603 kb on - strand, within QEN71_RS42395 at 557.643 kb on - strand, within QEN71_RS42395 at 557.669 kb on + strand, within QEN71_RS42395 at 557.669 kb on + strand, within QEN71_RS42395 at 557.693 kb on - strand, within QEN71_RS42395 at 557.813 kb on - strand, within QEN71_RS42395 at 557.813 kb on - strand, within QEN71_RS42395 at 557.813 kb on - strand, within QEN71_RS42395 at 558.041 kb on + strand, within QEN71_RS42395 at 558.041 kb on + strand, within QEN71_RS42395 at 558.042 kb on - strand, within QEN71_RS42395 at 558.221 kb on + strand, within QEN71_RS42395 at 558.222 kb on - strand, within QEN71_RS42395 at 558.248 kb on + strand, within QEN71_RS42395 at 558.248 kb on + strand, within QEN71_RS42395
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 555,556 + QEN71_RS42385 0.31 +0.8 555,586 + QEN71_RS42385 0.36 -0.6 555,586 + QEN71_RS42385 0.36 -1.5 555,604 + QEN71_RS42385 0.39 -0.0 555,655 + QEN71_RS42385 0.47 +0.2 555,655 + QEN71_RS42385 0.47 +0.6 555,709 + QEN71_RS42385 0.56 -1.9 555,710 - QEN71_RS42385 0.56 -0.3 555,723 + QEN71_RS42385 0.58 -0.5 555,724 - QEN71_RS42385 0.58 +1.1 555,882 - QEN71_RS42385 0.84 -0.2 557,106 + QEN71_RS42390 0.78 -1.7 557,603 - QEN71_RS42395 0.16 +1.0 557,643 - QEN71_RS42395 0.19 -0.0 557,669 + QEN71_RS42395 0.20 +0.0 557,669 + QEN71_RS42395 0.20 -0.6 557,693 - QEN71_RS42395 0.22 -0.6 557,813 - QEN71_RS42395 0.30 -1.4 557,813 - QEN71_RS42395 0.30 -0.2 557,813 - QEN71_RS42395 0.30 -0.3 558,041 + QEN71_RS42395 0.46 +0.2 558,041 + QEN71_RS42395 0.46 +0.8 558,042 - QEN71_RS42395 0.46 -1.8 558,221 + QEN71_RS42395 0.58 -0.2 558,222 - QEN71_RS42395 0.58 +0.6 558,248 + QEN71_RS42395 0.60 +0.1 558,248 + QEN71_RS42395 0.60 -1.3
Or see this region's nucleotide sequence