Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS35930 and QEN71_RS35935 are separated by 31 nucleotides QEN71_RS35935 and QEN71_RS35940 are separated by 303 nucleotides
QEN71_RS35930: QEN71_RS35930 - LysR family transcriptional regulator, at 1,442,179 to 1,443,123
_RS35930
QEN71_RS35935: QEN71_RS35935 - ureidoglycolate lyase, at 1,443,155 to 1,443,715
_RS35935
QEN71_RS35940: QEN71_RS35940 - DUF3455 domain-containing protein, at 1,444,019 to 1,444,477
_RS35940
Position (kb)
1444
1445 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1443.146 kb on + strand at 1443.147 kb on - strand at 1443.241 kb on + strand, within QEN71_RS35935 at 1443.602 kb on + strand, within QEN71_RS35935 at 1443.602 kb on + strand, within QEN71_RS35935 at 1443.602 kb on + strand, within QEN71_RS35935 at 1443.602 kb on + strand, within QEN71_RS35935 at 1443.603 kb on - strand, within QEN71_RS35935 at 1443.761 kb on + strand at 1443.763 kb on + strand at 1443.763 kb on + strand at 1443.764 kb on - strand at 1443.832 kb on + strand at 1443.833 kb on - strand at 1443.999 kb on + strand at 1444.119 kb on + strand, within QEN71_RS35940 at 1444.119 kb on + strand, within QEN71_RS35940 at 1444.119 kb on + strand, within QEN71_RS35940 at 1444.119 kb on + strand, within QEN71_RS35940 at 1444.119 kb on + strand, within QEN71_RS35940 at 1444.120 kb on - strand, within QEN71_RS35940 at 1444.120 kb on - strand, within QEN71_RS35940 at 1444.121 kb on + strand, within QEN71_RS35940 at 1444.121 kb on + strand, within QEN71_RS35940 at 1444.121 kb on + strand, within QEN71_RS35940 at 1444.121 kb on + strand, within QEN71_RS35940 at 1444.121 kb on + strand, within QEN71_RS35940 at 1444.122 kb on - strand, within QEN71_RS35940 at 1444.122 kb on - strand, within QEN71_RS35940 at 1444.187 kb on + strand, within QEN71_RS35940 at 1444.320 kb on + strand, within QEN71_RS35940 at 1444.321 kb on - strand, within QEN71_RS35940 at 1444.448 kb on + strand at 1444.465 kb on - strand at 1444.486 kb on + strand at 1444.489 kb on - strand at 1444.742 kb on + strand at 1444.795 kb on + strand at 1444.796 kb on - strand at 1444.796 kb on - strand at 1444.796 kb on - strand at 1444.844 kb on + strand at 1444.989 kb on - strand at 1445.008 kb on - strand at 1445.274 kb on + strand at 1445.360 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 1,443,146 + -0.8 1,443,147 - +0.1 1,443,241 + QEN71_RS35935 0.15 -1.1 1,443,602 + QEN71_RS35935 0.80 +1.1 1,443,602 + QEN71_RS35935 0.80 +0.1 1,443,602 + QEN71_RS35935 0.80 -0.2 1,443,602 + QEN71_RS35935 0.80 -0.2 1,443,603 - QEN71_RS35935 0.80 +1.2 1,443,761 + +1.8 1,443,763 + -1.0 1,443,763 + +0.6 1,443,764 - -1.2 1,443,832 + -0.5 1,443,833 - -0.6 1,443,999 + +1.7 1,444,119 + QEN71_RS35940 0.22 +1.6 1,444,119 + QEN71_RS35940 0.22 -0.2 1,444,119 + QEN71_RS35940 0.22 -0.9 1,444,119 + QEN71_RS35940 0.22 +0.3 1,444,119 + QEN71_RS35940 0.22 -0.2 1,444,120 - QEN71_RS35940 0.22 -0.7 1,444,120 - QEN71_RS35940 0.22 -2.1 1,444,121 + QEN71_RS35940 0.22 -2.4 1,444,121 + QEN71_RS35940 0.22 -1.5 1,444,121 + QEN71_RS35940 0.22 -0.2 1,444,121 + QEN71_RS35940 0.22 -0.2 1,444,121 + QEN71_RS35940 0.22 -0.7 1,444,122 - QEN71_RS35940 0.22 -1.2 1,444,122 - QEN71_RS35940 0.22 -0.1 1,444,187 + QEN71_RS35940 0.37 -2.8 1,444,320 + QEN71_RS35940 0.66 +0.8 1,444,321 - QEN71_RS35940 0.66 -0.1 1,444,448 + -0.4 1,444,465 - -0.5 1,444,486 + +0.4 1,444,489 - +0.2 1,444,742 + +0.3 1,444,795 + -0.5 1,444,796 - +0.3 1,444,796 - -1.0 1,444,796 - -0.2 1,444,844 + -0.5 1,444,989 - +0.7 1,445,008 - +0.9 1,445,274 + +0.0 1,445,360 - -0.2
Or see this region's nucleotide sequence