Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS32710 and QEN71_RS32715 overlap by 4 nucleotides QEN71_RS32715 and QEN71_RS32720 are separated by 292 nucleotides
QEN71_RS32710: QEN71_RS32710 - formylmethanofuran dehydrogenase subunit A, at 672,376 to 674,076
_RS32710
QEN71_RS32715: QEN71_RS32715 - formylmethanofuran dehydrogenase, at 674,073 to 675,482
_RS32715
QEN71_RS32720: QEN71_RS32720 - HisA/HisF-related TIM barrel protein, at 675,775 to 676,554
_RS32720
Position (kb) 674
675
676 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 673.539 kb on - strand, within QEN71_RS32710 at 673.706 kb on + strand, within QEN71_RS32710 at 673.706 kb on + strand, within QEN71_RS32710 at 673.998 kb on + strand at 674.000 kb on + strand at 674.000 kb on + strand at 674.000 kb on + strand at 674.000 kb on + strand at 674.001 kb on - strand at 674.001 kb on - strand at 674.001 kb on - strand at 674.171 kb on + strand at 674.171 kb on + strand at 674.172 kb on - strand at 674.207 kb on + strand at 674.933 kb on - strand, within QEN71_RS32715 at 675.112 kb on + strand, within QEN71_RS32715 at 675.266 kb on - strand, within QEN71_RS32715 at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.660 kb on + strand at 675.661 kb on - strand at 675.661 kb on - strand at 675.661 kb on - strand at 675.661 kb on - strand at 676.224 kb on + strand, within QEN71_RS32720 at 676.224 kb on + strand, within QEN71_RS32720 at 676.225 kb on - strand, within QEN71_RS32720 at 676.392 kb on - strand, within QEN71_RS32720 at 676.481 kb on + strand at 676.481 kb on + strand at 676.481 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 673,539 - QEN71_RS32710 0.68 -1.6 673,706 + QEN71_RS32710 0.78 +0.8 673,706 + QEN71_RS32710 0.78 +0.4 673,998 + +0.2 674,000 + -0.6 674,000 + -0.2 674,000 + -0.8 674,000 + +0.9 674,001 - +0.2 674,001 - -0.4 674,001 - +1.1 674,171 + -1.0 674,171 + +1.2 674,172 - +0.2 674,207 + -1.3 674,933 - QEN71_RS32715 0.61 +0.2 675,112 + QEN71_RS32715 0.74 -3.1 675,266 - QEN71_RS32715 0.85 -0.6 675,660 + +1.0 675,660 + -0.6 675,660 + -2.2 675,660 + -0.3 675,660 + +0.1 675,660 + -0.1 675,660 + -2.1 675,660 + +1.6 675,660 + -0.6 675,660 + -1.9 675,661 - +0.8 675,661 - +0.8 675,661 - -0.0 675,661 - +0.1 676,224 + QEN71_RS32720 0.58 -0.6 676,224 + QEN71_RS32720 0.58 -1.2 676,225 - QEN71_RS32720 0.58 -0.1 676,392 - QEN71_RS32720 0.79 -0.0 676,481 + -2.1 676,481 + +0.8 676,481 + +0.9
Or see this region's nucleotide sequence