Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS32510 and QEN71_RS32515 are separated by 228 nucleotides QEN71_RS32515 and QEN71_RS32520 are separated by 53 nucleotides
QEN71_RS32510: QEN71_RS32510 - 2-dehydro-3-deoxyglucarate aldolase, at 631,243 to 632,028
_RS32510
QEN71_RS32515: QEN71_RS32515 - aldehyde dehydrogenase (NADP(+)), at 632,257 to 633,840
_RS32515
QEN71_RS32520: QEN71_RS32520 - FadR/GntR family transcriptional regulator, at 633,894 to 634,655
_RS32520
Position (kb) 632
633
634 Strain fitness (log2 ratio) -2
-1
0
1 at 631.341 kb on - strand, within QEN71_RS32510 at 631.466 kb on + strand, within QEN71_RS32510 at 631.466 kb on + strand, within QEN71_RS32510 at 631.467 kb on - strand, within QEN71_RS32510 at 631.467 kb on - strand, within QEN71_RS32510 at 631.467 kb on - strand, within QEN71_RS32510 at 631.467 kb on - strand, within QEN71_RS32510 at 631.604 kb on + strand, within QEN71_RS32510 at 631.604 kb on + strand, within QEN71_RS32510 at 631.604 kb on + strand, within QEN71_RS32510 at 631.604 kb on + strand, within QEN71_RS32510 at 631.604 kb on + strand, within QEN71_RS32510 at 631.605 kb on - strand, within QEN71_RS32510 at 631.605 kb on - strand, within QEN71_RS32510 at 631.605 kb on - strand, within QEN71_RS32510 at 631.605 kb on - strand, within QEN71_RS32510 at 632.009 kb on + strand at 632.009 kb on + strand at 632.010 kb on - strand at 632.010 kb on - strand at 632.081 kb on + strand at 632.081 kb on + strand at 632.081 kb on + strand at 632.081 kb on + strand at 632.082 kb on - strand at 632.082 kb on - strand at 632.082 kb on - strand at 632.144 kb on + strand at 632.166 kb on + strand at 632.167 kb on - strand at 632.377 kb on - strand at 632.432 kb on - strand, within QEN71_RS32515 at 632.977 kb on - strand, within QEN71_RS32515 at 633.742 kb on + strand at 633.742 kb on + strand at 633.742 kb on + strand at 634.007 kb on + strand, within QEN71_RS32520 at 634.007 kb on + strand, within QEN71_RS32520 at 634.008 kb on - strand, within QEN71_RS32520 at 634.008 kb on - strand, within QEN71_RS32520 at 634.008 kb on - strand, within QEN71_RS32520 at 634.060 kb on + strand, within QEN71_RS32520 at 634.060 kb on + strand, within QEN71_RS32520 at 634.060 kb on + strand, within QEN71_RS32520 at 634.061 kb on - strand, within QEN71_RS32520 at 634.061 kb on - strand, within QEN71_RS32520 at 634.154 kb on - strand, within QEN71_RS32520 at 634.232 kb on + strand, within QEN71_RS32520 at 634.233 kb on - strand, within QEN71_RS32520 at 634.583 kb on - strand at 634.679 kb on + strand at 634.679 kb on + strand at 634.680 kb on - strand at 634.680 kb on - strand at 634.681 kb on + strand at 634.681 kb on + strand at 634.729 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 631,341 - QEN71_RS32510 0.12 -0.6 631,466 + QEN71_RS32510 0.28 -1.3 631,466 + QEN71_RS32510 0.28 -0.4 631,467 - QEN71_RS32510 0.28 +0.1 631,467 - QEN71_RS32510 0.28 -0.5 631,467 - QEN71_RS32510 0.28 +0.5 631,467 - QEN71_RS32510 0.28 -1.0 631,604 + QEN71_RS32510 0.46 +0.6 631,604 + QEN71_RS32510 0.46 -0.5 631,604 + QEN71_RS32510 0.46 +0.0 631,604 + QEN71_RS32510 0.46 -0.4 631,604 + QEN71_RS32510 0.46 -0.3 631,605 - QEN71_RS32510 0.46 -1.0 631,605 - QEN71_RS32510 0.46 -0.4 631,605 - QEN71_RS32510 0.46 +0.7 631,605 - QEN71_RS32510 0.46 +0.2 632,009 + +0.6 632,009 + -0.8 632,010 - +1.3 632,010 - +1.0 632,081 + -0.8 632,081 + -0.4 632,081 + -1.2 632,081 + -1.8 632,082 - +0.3 632,082 - -0.1 632,082 - -0.5 632,144 + -0.0 632,166 + +0.5 632,167 - -1.3 632,377 - +0.2 632,432 - QEN71_RS32515 0.11 -1.6 632,977 - QEN71_RS32515 0.45 -1.0 633,742 + -0.7 633,742 + -1.0 633,742 + +0.8 634,007 + QEN71_RS32520 0.15 -0.4 634,007 + QEN71_RS32520 0.15 -1.4 634,008 - QEN71_RS32520 0.15 +0.6 634,008 - QEN71_RS32520 0.15 -0.3 634,008 - QEN71_RS32520 0.15 -0.2 634,060 + QEN71_RS32520 0.22 +0.5 634,060 + QEN71_RS32520 0.22 +0.4 634,060 + QEN71_RS32520 0.22 -0.7 634,061 - QEN71_RS32520 0.22 +0.4 634,061 - QEN71_RS32520 0.22 -0.6 634,154 - QEN71_RS32520 0.34 -0.0 634,232 + QEN71_RS32520 0.44 -1.3 634,233 - QEN71_RS32520 0.44 +0.9 634,583 - +1.2 634,679 + -0.9 634,679 + -0.2 634,680 - -1.8 634,680 - -0.4 634,681 + -1.1 634,681 + -1.4 634,729 + +0.0
Or see this region's nucleotide sequence