Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31200 and QEN71_RS31205 are separated by 50 nucleotides QEN71_RS31205 and QEN71_RS31210 are separated by 70 nucleotides
QEN71_RS31200: QEN71_RS31200 - M81 family metallopeptidase, at 351,775 to 353,307
_RS31200
QEN71_RS31205: QEN71_RS31205 - NUDIX hydrolase, at 353,358 to 353,873
_RS31205
QEN71_RS31210: QEN71_RS31210 - hypothetical protein, at 353,944 to 354,780
_RS31210
Position (kb) 353
354 Strain fitness (log2 ratio) -2
-1
0
1
2 at 352.420 kb on + strand, within QEN71_RS31200 at 352.421 kb on - strand, within QEN71_RS31200 at 352.421 kb on - strand, within QEN71_RS31200 at 352.525 kb on + strand, within QEN71_RS31200 at 352.531 kb on + strand, within QEN71_RS31200 at 352.532 kb on - strand, within QEN71_RS31200 at 352.568 kb on + strand, within QEN71_RS31200 at 352.568 kb on + strand, within QEN71_RS31200 at 352.569 kb on - strand, within QEN71_RS31200 at 352.569 kb on - strand, within QEN71_RS31200 at 352.569 kb on - strand, within QEN71_RS31200 at 352.569 kb on - strand, within QEN71_RS31200 at 352.570 kb on + strand, within QEN71_RS31200 at 352.570 kb on + strand, within QEN71_RS31200 at 352.570 kb on + strand, within QEN71_RS31200 at 352.570 kb on + strand, within QEN71_RS31200 at 352.570 kb on + strand, within QEN71_RS31200 at 352.570 kb on + strand, within QEN71_RS31200 at 352.570 kb on + strand, within QEN71_RS31200 at 352.571 kb on - strand, within QEN71_RS31200 at 352.571 kb on - strand, within QEN71_RS31200 at 352.571 kb on - strand, within QEN71_RS31200 at 352.571 kb on - strand, within QEN71_RS31200 at 353.499 kb on + strand, within QEN71_RS31205 at 353.499 kb on + strand, within QEN71_RS31205 at 353.499 kb on + strand, within QEN71_RS31205 at 353.500 kb on - strand, within QEN71_RS31205 at 353.667 kb on + strand, within QEN71_RS31205 at 353.668 kb on - strand, within QEN71_RS31205 at 353.668 kb on - strand, within QEN71_RS31205 at 353.668 kb on - strand, within QEN71_RS31205 at 353.668 kb on - strand, within QEN71_RS31205 at 354.005 kb on + strand at 354.317 kb on + strand, within QEN71_RS31210 at 354.317 kb on + strand, within QEN71_RS31210 at 354.318 kb on - strand, within QEN71_RS31210 at 354.341 kb on + strand, within QEN71_RS31210 at 354.341 kb on + strand, within QEN71_RS31210 at 354.342 kb on - strand, within QEN71_RS31210 at 354.342 kb on - strand, within QEN71_RS31210 at 354.522 kb on + strand, within QEN71_RS31210 at 354.635 kb on + strand, within QEN71_RS31210 at 354.635 kb on + strand, within QEN71_RS31210 at 354.636 kb on - strand, within QEN71_RS31210 at 354.636 kb on - strand, within QEN71_RS31210 at 354.767 kb on + strand at 354.767 kb on + strand at 354.768 kb on - strand at 354.768 kb on - strand at 354.799 kb on - strand at 354.799 kb on - strand at 354.799 kb on - strand at 354.853 kb on + strand at 354.854 kb on - strand at 354.854 kb on - strand at 354.854 kb on - strand at 354.857 kb on - strand at 354.870 kb on + strand at 354.871 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 352,420 + QEN71_RS31200 0.42 +1.0 352,421 - QEN71_RS31200 0.42 +0.2 352,421 - QEN71_RS31200 0.42 +0.0 352,525 + QEN71_RS31200 0.49 -1.4 352,531 + QEN71_RS31200 0.49 -0.2 352,532 - QEN71_RS31200 0.49 -1.3 352,568 + QEN71_RS31200 0.52 +1.0 352,568 + QEN71_RS31200 0.52 +0.7 352,569 - QEN71_RS31200 0.52 -0.2 352,569 - QEN71_RS31200 0.52 -0.5 352,569 - QEN71_RS31200 0.52 -1.3 352,569 - QEN71_RS31200 0.52 -0.5 352,570 + QEN71_RS31200 0.52 -0.2 352,570 + QEN71_RS31200 0.52 +0.7 352,570 + QEN71_RS31200 0.52 -0.3 352,570 + QEN71_RS31200 0.52 -1.8 352,570 + QEN71_RS31200 0.52 -0.7 352,570 + QEN71_RS31200 0.52 -0.9 352,570 + QEN71_RS31200 0.52 +1.0 352,571 - QEN71_RS31200 0.52 -0.6 352,571 - QEN71_RS31200 0.52 +0.1 352,571 - QEN71_RS31200 0.52 +0.6 352,571 - QEN71_RS31200 0.52 -0.3 353,499 + QEN71_RS31205 0.27 -1.3 353,499 + QEN71_RS31205 0.27 +1.0 353,499 + QEN71_RS31205 0.27 -0.1 353,500 - QEN71_RS31205 0.28 +1.5 353,667 + QEN71_RS31205 0.60 -0.5 353,668 - QEN71_RS31205 0.60 +0.8 353,668 - QEN71_RS31205 0.60 -0.8 353,668 - QEN71_RS31205 0.60 +0.3 353,668 - QEN71_RS31205 0.60 -0.3 354,005 + -0.0 354,317 + QEN71_RS31210 0.45 +0.6 354,317 + QEN71_RS31210 0.45 -0.0 354,318 - QEN71_RS31210 0.45 -0.9 354,341 + QEN71_RS31210 0.47 +0.6 354,341 + QEN71_RS31210 0.47 +0.4 354,342 - QEN71_RS31210 0.48 +0.2 354,342 - QEN71_RS31210 0.48 -0.1 354,522 + QEN71_RS31210 0.69 +1.2 354,635 + QEN71_RS31210 0.83 -0.2 354,635 + QEN71_RS31210 0.83 -0.7 354,636 - QEN71_RS31210 0.83 +0.6 354,636 - QEN71_RS31210 0.83 -0.2 354,767 + -0.2 354,767 + +0.4 354,768 - +1.0 354,768 - -0.4 354,799 - -0.1 354,799 - -0.0 354,799 - -0.0 354,853 + -0.4 354,854 - -0.7 354,854 - +0.3 354,854 - +0.2 354,857 - -0.4 354,870 + +2.1 354,871 - +1.1
Or see this region's nucleotide sequence