Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS29975 and QEN71_RS29980 are separated by 7 nucleotides QEN71_RS29980 and QEN71_RS29985 are separated by 186 nucleotides
QEN71_RS29975: QEN71_RS29975 - NAD(P)-dependent oxidoreductase, at 70,974 to 71,879
_RS29975
QEN71_RS29980: QEN71_RS29980 - Gfo/Idh/MocA family oxidoreductase, at 71,887 to 72,924
_RS29980
QEN71_RS29985: QEN71_RS29985 - ABC transporter substrate-binding protein, at 73,111 to 74,430
_RS29985
Position (kb) 71
72
73 Strain fitness (log2 ratio) -1
0
1 at 71.320 kb on - strand, within QEN71_RS29975 at 71.320 kb on - strand, within QEN71_RS29975 at 71.320 kb on - strand, within QEN71_RS29975 at 71.382 kb on + strand, within QEN71_RS29975 at 71.383 kb on - strand, within QEN71_RS29975 at 71.424 kb on + strand, within QEN71_RS29975 at 71.551 kb on - strand, within QEN71_RS29975 at 71.611 kb on - strand, within QEN71_RS29975 at 71.877 kb on + strand at 71.877 kb on + strand at 71.878 kb on - strand at 72.450 kb on - strand, within QEN71_RS29980 at 72.464 kb on + strand, within QEN71_RS29980 at 72.762 kb on - strand, within QEN71_RS29980 at 72.918 kb on + strand at 73.090 kb on - strand at 73.577 kb on - strand, within QEN71_RS29985 at 73.631 kb on - strand, within QEN71_RS29985 at 73.729 kb on + strand, within QEN71_RS29985 at 73.730 kb on - strand, within QEN71_RS29985 at 73.730 kb on - strand, within QEN71_RS29985 at 73.736 kb on - strand, within QEN71_RS29985
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 71,320 - QEN71_RS29975 0.38 -0.2 71,320 - QEN71_RS29975 0.38 +1.5 71,320 - QEN71_RS29975 0.38 -0.1 71,382 + QEN71_RS29975 0.45 -1.1 71,383 - QEN71_RS29975 0.45 -0.7 71,424 + QEN71_RS29975 0.50 -0.7 71,551 - QEN71_RS29975 0.64 +0.5 71,611 - QEN71_RS29975 0.70 -1.5 71,877 + -0.6 71,877 + +0.3 71,878 - -0.7 72,450 - QEN71_RS29980 0.54 -0.2 72,464 + QEN71_RS29980 0.56 +0.1 72,762 - QEN71_RS29980 0.84 +0.3 72,918 + -0.1 73,090 - +0.2 73,577 - QEN71_RS29985 0.35 -1.0 73,631 - QEN71_RS29985 0.39 +0.3 73,729 + QEN71_RS29985 0.47 -1.1 73,730 - QEN71_RS29985 0.47 -1.1 73,730 - QEN71_RS29985 0.47 -0.1 73,736 - QEN71_RS29985 0.47 +0.5
Or see this region's nucleotide sequence