Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS29480

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
6,542,173	+		QEN71_RS29475	0.25	-1.3
6,542,173	+		QEN71_RS29475	0.25	-0.6
6,542,174	-		QEN71_RS29475	0.25	-3.0
6,542,174	-		QEN71_RS29475	0.25	-3.0
6,542,174	-		QEN71_RS29475	0.25	-3.0
6,542,174	-		QEN71_RS29475	0.25	+0.0
6,542,174	-		QEN71_RS29475	0.25	-3.8
6,542,174	-		QEN71_RS29475	0.25	-2.0
6,542,182	+		QEN71_RS29475	0.26	-0.5
6,542,182	+		QEN71_RS29475	0.26	-2.3
6,542,182	+		QEN71_RS29475	0.26	-1.8
6,542,182	+		QEN71_RS29475	0.26	-2.8
6,542,183	-		QEN71_RS29475	0.26	-1.8
6,542,183	-		QEN71_RS29475	0.26	-2.1
6,542,183	-		QEN71_RS29475	0.26	-2.9
6,542,183	-		QEN71_RS29475	0.26	-2.5
6,542,245	+		QEN71_RS29475	0.31	-1.0
6,542,245	+		QEN71_RS29475	0.31	-4.5
6,542,245	+		QEN71_RS29475	0.31	-2.9
6,542,245	+		QEN71_RS29475	0.31	-2.7
6,542,245	+		QEN71_RS29475	0.31	-1.7
6,542,245	+		QEN71_RS29475	0.31	-2.4
6,542,245	+		QEN71_RS29475	0.31	-2.9
6,542,245	+		QEN71_RS29475	0.31	-2.2
6,542,246	-		QEN71_RS29475	0.31	-1.4
6,542,246	-		QEN71_RS29475	0.31	-3.1
6,542,246	-		QEN71_RS29475	0.31	-1.9
6,542,246	-		QEN71_RS29475	0.31	+0.2
6,542,246	-		QEN71_RS29475	0.31	-2.2
6,542,246	-		QEN71_RS29475	0.31	-3.6
6,542,246	-		QEN71_RS29475	0.31	-1.8
6,542,246	-		QEN71_RS29475	0.31	-1.5
6,542,246	-		QEN71_RS29475	0.31	-1.2
6,542,246	-		QEN71_RS29475	0.31	-1.0
6,542,246	-		QEN71_RS29475	0.31	+0.0
6,542,246	-		QEN71_RS29475	0.31	-2.8
6,542,246	-		QEN71_RS29475	0.31	-1.4
6,542,246	-		QEN71_RS29475	0.31	-2.5
6,542,246	-		QEN71_RS29475	0.31	+0.2
6,542,285	+		QEN71_RS29475	0.35	+0.3
6,542,285	+		QEN71_RS29475	0.35	-4.0
6,542,285	+		QEN71_RS29475	0.35	-2.0
6,542,285	+		QEN71_RS29475	0.35	+0.5
6,542,285	+		QEN71_RS29475	0.35	-1.5
6,542,285	+		QEN71_RS29475	0.35	-3.0
6,542,286	-		QEN71_RS29475	0.35	-0.1
6,542,286	-		QEN71_RS29475	0.35	-2.3
6,542,341	+		QEN71_RS29475	0.40	+0.0
6,542,341	+		QEN71_RS29475	0.40	-2.0
6,542,341	+		QEN71_RS29475	0.40	-1.2
6,542,341	+		QEN71_RS29475	0.40	-1.3
6,542,341	+		QEN71_RS29475	0.40	-3.8
6,542,341	+		QEN71_RS29475	0.40	-0.9
6,542,341	+		QEN71_RS29475	0.40	-2.5
6,542,342	-		QEN71_RS29475	0.40	-3.0
6,542,342	-		QEN71_RS29475	0.40	-2.8
6,542,342	-		QEN71_RS29475	0.40	-3.6
6,542,372	+		QEN71_RS29475	0.43	-4.3
6,542,372	+		QEN71_RS29475	0.43	-2.9
6,542,372	+		QEN71_RS29475	0.43	-0.8
6,542,372	+		QEN71_RS29475	0.43	-2.1
6,542,373	-		QEN71_RS29475	0.43	-0.5
6,542,392	+		QEN71_RS29475	0.44	-2.0
6,542,393	-		QEN71_RS29475	0.45	-1.0
6,542,393	-		QEN71_RS29475	0.45	-2.2
6,542,393	-		QEN71_RS29475	0.45	-1.8
6,542,393	-		QEN71_RS29475	0.45	-0.7
6,542,638	+		QEN71_RS29475	0.66	-2.6
6,542,638	+		QEN71_RS29475	0.66	-1.3
6,542,638	+		QEN71_RS29475	0.66	-1.5
6,542,639	-		QEN71_RS29475	0.67	-2.8
6,542,644	+		QEN71_RS29475	0.67	-2.9
6,542,644	+		QEN71_RS29475	0.67	-1.4
6,542,644	+		QEN71_RS29475	0.67	-0.4
6,542,644	+		QEN71_RS29475	0.67	-3.7
6,542,644	+		QEN71_RS29475	0.67	-3.5
6,542,644	+		QEN71_RS29475	0.67	-0.3
6,542,645	-		QEN71_RS29475	0.67	-1.8
6,542,645	-		QEN71_RS29475	0.67	-2.7
6,542,659	+		QEN71_RS29475	0.68	-2.6
6,542,660	-		QEN71_RS29475	0.68	-1.6
6,542,929	+				-2.4
6,542,929	+				-2.3
6,542,929	+				-3.0
6,542,929	+				+0.5
6,542,929	+				-3.4
6,542,929	+				-2.4
6,542,929	+				-3.7
6,542,929	+				-2.0
6,542,929	+				-0.8
6,542,929	+				-1.4
6,542,929	+				-1.1
6,542,929	+				-2.6
6,542,929	+				-0.3
6,542,930	-				-2.4
6,542,930	-				-2.7
6,542,930	-				-2.3
6,542,930	-				-3.2
6,542,930	-				-3.6
6,542,930	-				-2.5
6,542,930	-				-1.7
6,542,930	-				-2.2
6,542,939	+				-1.0
6,542,939	+				-1.2
6,542,939	+				-2.7
6,542,939	+				-2.6
6,542,940	-				-1.0
6,543,091	+				+0.6
6,543,091	+				-0.6
6,543,091	+				-1.5
6,543,092	-				-0.4
6,543,092	-				-0.4
6,543,092	-				-0.7
6,543,092	-				-0.3
6,543,111	-				+1.0
6,543,111	-				-0.3
6,543,178	+				-2.2
6,543,179	-				+0.2
6,543,268	+		QEN71_RS29480	0.11	-1.9
6,543,268	+		QEN71_RS29480	0.11	-1.6
6,543,268	+		QEN71_RS29480	0.11	-0.5
6,543,268	+		QEN71_RS29480	0.11	-1.3
6,543,268	+		QEN71_RS29480	0.11	-0.4
6,543,269	-		QEN71_RS29480	0.11	-2.5
6,543,269	-		QEN71_RS29480	0.11	-3.1
6,543,269	-		QEN71_RS29480	0.11	-1.9
6,543,269	-		QEN71_RS29480	0.11	-0.6
6,543,269	-		QEN71_RS29480	0.11	-2.2
6,543,269	-		QEN71_RS29480	0.11	-2.3
6,543,269	-		QEN71_RS29480	0.11	-1.5
6,543,269	-		QEN71_RS29480	0.11	-1.5
6,543,289	+		QEN71_RS29480	0.12	+1.3
6,543,435	+		QEN71_RS29480	0.24	+0.5
6,543,436	-		QEN71_RS29480	0.25	-1.1
6,543,436	-		QEN71_RS29480	0.25	-1.7
6,543,605	+		QEN71_RS29480	0.39	-2.1
6,543,606	-		QEN71_RS29480	0.39	-4.1
6,543,606	-		QEN71_RS29480	0.39	-1.7
6,543,606	-		QEN71_RS29480	0.39	+0.0
6,543,606	-		QEN71_RS29480	0.39	-2.2
6,543,606	-		QEN71_RS29480	0.39	-1.2
6,543,606	-		QEN71_RS29480	0.39	-3.1
6,543,606	-		QEN71_RS29480	0.39	-1.9
6,543,606	-		QEN71_RS29480	0.39	-2.7
6,543,606	-		QEN71_RS29480	0.39	-3.2
6,543,606	-		QEN71_RS29480	0.39	-3.4
6,543,606	-		QEN71_RS29480	0.39	+0.0
6,543,685	+		QEN71_RS29480	0.45	-3.6
6,543,685	+		QEN71_RS29480	0.45	+0.9
6,543,685	+		QEN71_RS29480	0.45	-3.2
6,543,685	+		QEN71_RS29480	0.45	-1.0
6,543,686	-		QEN71_RS29480	0.45	-2.2
6,543,715	+		QEN71_RS29480	0.48	-3.3
6,543,715	+		QEN71_RS29480	0.48	-2.0
6,543,716	-		QEN71_RS29480	0.48	-1.4
6,543,716	-		QEN71_RS29480	0.48	-1.7
6,543,716	-		QEN71_RS29480	0.48	-1.9
6,543,716	-		QEN71_RS29480	0.48	-2.3
6,543,745	+		QEN71_RS29480	0.50	-2.0
6,543,745	+		QEN71_RS29480	0.50	-2.9
6,543,746	-		QEN71_RS29480	0.50	-2.5
6,543,781	+		QEN71_RS29480	0.53	-0.3
6,543,782	-		QEN71_RS29480	0.53	-3.2
6,543,782	-		QEN71_RS29480	0.53	-1.4
6,543,832	+		QEN71_RS29480	0.57	-0.8
6,543,832	+		QEN71_RS29480	0.57	-4.0
6,543,832	+		QEN71_RS29480	0.57	-0.3
6,543,832	+		QEN71_RS29480	0.57	-1.5
6,543,832	+		QEN71_RS29480	0.57	-0.3
6,543,832	+		QEN71_RS29480	0.57	-2.3
6,543,832	+		QEN71_RS29480	0.57	-1.9
6,543,832	+		QEN71_RS29480	0.57	+0.0
6,543,832	+		QEN71_RS29480	0.57	-2.0
6,543,832	+		QEN71_RS29480	0.57	-1.8
6,543,832	+		QEN71_RS29480	0.57	-2.1
6,543,832	+		QEN71_RS29480	0.57	-1.3
6,543,832	+		QEN71_RS29480	0.57	-1.8
6,543,833	-		QEN71_RS29480	0.58	-3.6
6,543,833	-		QEN71_RS29480	0.58	-0.5
6,543,833	-		QEN71_RS29480	0.58	-0.8
6,543,833	-		QEN71_RS29480	0.58	-1.3
6,543,833	-		QEN71_RS29480	0.58	-1.3
6,543,833	-		QEN71_RS29480	0.58	-2.2
6,543,833	-		QEN71_RS29480	0.58	-1.8
6,543,833	-		QEN71_RS29480	0.58	-1.8
6,543,833	-		QEN71_RS29480	0.58	-2.5
6,543,833	-		QEN71_RS29480	0.58	-2.2
6,543,833	-		QEN71_RS29480	0.58	-1.3
6,543,972	+		QEN71_RS29480	0.69	-2.7
6,543,972	+		QEN71_RS29480	0.69	-0.9
6,543,972	+		QEN71_RS29480	0.69	-2.7
6,543,972	+		QEN71_RS29480	0.69	-2.5
6,543,972	+		QEN71_RS29480	0.69	-2.3
6,543,973	-		QEN71_RS29480	0.69	-2.2
6,543,973	-		QEN71_RS29480	0.69	-0.3
6,543,973	-		QEN71_RS29480	0.69	-1.9
6,544,052	+		QEN71_RS29480	0.76	-3.2
6,544,052	+		QEN71_RS29480	0.76	-0.3
6,544,052	+		QEN71_RS29480	0.76	-2.4
6,544,052	+		QEN71_RS29480	0.76	-2.4
6,544,052	+		QEN71_RS29480	0.76	-2.7
6,544,052	+		QEN71_RS29480	0.76	-0.4
6,544,052	+		QEN71_RS29480	0.76	-1.8
6,544,052	+		QEN71_RS29480	0.76	-3.5
6,544,053	-		QEN71_RS29480	0.76	-3.0
6,544,053	-		QEN71_RS29480	0.76	-2.6
6,544,053	-		QEN71_RS29480	0.76	-3.0
6,544,053	-		QEN71_RS29480	0.76	-1.8
6,544,053	-		QEN71_RS29480	0.76	+0.7
6,544,053	-		QEN71_RS29480	0.76	-3.4
6,544,053	-		QEN71_RS29480	0.76	-1.2
6,544,053	-		QEN71_RS29480	0.76	-2.0
6,544,053	-		QEN71_RS29480	0.76	-1.6
6,544,053	-		QEN71_RS29480	0.76	+0.0
6,544,053	-		QEN71_RS29480	0.76	-1.8
6,544,237	+				-2.4
6,544,493	+				-0.1
6,544,493	+				-1.7
6,544,494	-				+0.4
6,544,494	-				+0.2
6,544,512	+				-1.1
6,544,512	+				-1.7
6,544,512	+				-1.6
6,544,513	-				+0.8
6,544,513	-				+0.7
6,544,513	-				+1.6
6,544,513	-				-0.0
6,544,513	-				+1.0
6,544,513	-				+0.5
6,544,643	+				-0.7
6,544,643	+				-2.1
6,544,643	+				-0.8
6,544,643	+				-0.6
6,544,643	+				-0.3
6,544,643	+				-1.3
6,544,643	+				-2.1
6,544,643	+				-1.5
6,544,643	+				-0.6
6,544,643	+				+1.0
6,544,643	+				-1.0
6,544,643	+				-0.5
6,544,643	+				-1.5
6,544,644	-				-0.0
6,544,644	-				+0.8
6,544,644	-				+1.2
6,544,644	-				+0.8
6,544,644	-				-1.6
6,544,644	-				+1.0
6,544,644	-				+1.3
6,544,644	-				+0.9
6,544,644	-				+0.7
6,544,644	-				-0.5
6,544,644	-				+0.9
6,544,644	-				+0.8
6,544,644	-				+0.7
6,544,644	-				+1.0
6,544,704	+				+0.5
6,544,782	+				-1.1
6,544,782	+				-0.3
6,544,782	+				-0.3
6,544,782	+				-0.8
6,544,783	-				-0.3
6,544,783	-				-0.4
6,544,783	-				-0.4
6,544,871	+				-0.2
6,544,871	+				+0.8
6,544,871	+				+0.6
6,544,871	+				-0.1
6,544,871	+				+0.5
6,544,871	+				-1.5
6,544,872	-				+0.6
6,544,872	-				+1.8
6,544,872	-				+1.2
6,544,908	+				+0.5
6,544,908	+				-0.1
6,544,908	+				+1.5
6,544,908	+				-0.1
6,544,908	+				-0.4
6,544,908	+				+0.5
6,544,909	-				+0.8
6,544,909	-				-0.6
6,544,909	-				-1.7
6,544,909	-				+0.3
6,544,909	-				-0.7
6,544,909	-				+0.4
6,544,909	-				+1.1
6,544,909	-				-0.3
6,544,909	-				+1.5
6,544,909	-				+1.9
6,544,909	-				-0.2
6,544,961	+				+0.3
6,544,961	+				+0.3
6,544,962	-				+0.0
6,544,962	-				+0.8
6,544,962	-				+0.4
6,544,962	-				+0.7
6,544,967	+				-0.6
6,544,967	+				-0.3
6,544,967	+				+0.4
6,544,968	-				+0.6
6,544,968	-				+0.6
6,544,973	+				+0.1
6,544,973	+				-0.3
6,544,973	+				-1.5
6,544,973	+				+2.0
6,544,973	+				-0.3
6,544,973	+				-0.2
6,544,973	+				-0.0
6,544,973	+				+0.3
6,544,973	+				-0.0
6,544,973	+				-0.1
6,544,973	+				-0.4
6,544,973	+				-2.5
6,544,973	+				+0.0
6,544,973	+				-0.5
6,544,973	+				-0.6
6,544,973	+				+0.2
6,544,973	+				-0.7
6,544,973	+				+0.0
6,544,974	-				-0.2
6,544,974	-				+0.2
6,544,974	-				+0.2
6,544,974	-				+0.9
6,544,974	-				-0.0
6,544,974	-				+0.8
6,544,974	-				+0.7
6,544,974	-				+0.6
6,544,974	-				+0.7
6,544,974	-				+0.4
6,544,977	+				-0.7
6,544,977	+				-0.4
6,544,977	+				-0.0
6,544,977	+				-0.4
6,544,977	+				-0.9
6,544,977	+				-0.0
6,544,977	+				-2.3
6,544,977	+				-0.4
6,544,977	+				+0.3
6,544,977	+				+0.2
6,544,977	+				-2.9
6,544,977	+				+0.1
6,544,977	+				-0.4
6,544,977	+				+1.7
6,544,977	+				-0.6
6,544,978	-				+1.3
6,544,978	-				+0.0
6,544,978	-				+0.5
6,544,978	-				+1.3
6,544,978	-				+0.8
6,544,978	-				+0.6
6,544,978	-				-0.1
6,544,978	-				+0.0
6,544,978	-				+0.0
6,544,978	-				+0.4
6,544,978	-				-0.1
6,544,978	-				+0.9
6,544,978	-				-0.5
6,544,978	-				-0.0
6,544,978	-				+0.0
6,544,978	-				+0.6
6,544,978	-				-0.9
6,544,978	-				-1.9
6,544,978	-				+0.0
6,544,978	-				+0.2
6,544,979	+				+0.5
6,544,979	+				+0.5
6,544,979	+				-0.5
6,544,979	+				-0.2
6,544,979	+				+0.3
6,544,979	+				+0.0
6,544,980	-				+1.2
6,544,980	-				+0.5
6,544,980	-				+0.4
6,544,980	-				-0.8
6,544,980	-				-0.3
6,544,980	-				+0.1
6,544,980	-				-0.3
6,544,983	+				-1.0
6,544,983	+				-0.3
6,544,983	+				-0.6
6,544,983	+				+0.8
6,544,984	-				+0.1
6,544,984	-				+1.0
6,544,984	-				-1.0
6,544,984	-				-0.7
6,544,984	-				+0.2
6,544,984	-				+0.2
6,544,984	-				+1.0
6,544,984	-				+0.4
6,544,984	-				-0.2
6,544,984	-				+0.9
6,544,984	-				+0.5
6,544,986	+				+0.2
6,544,986	+				-0.1
6,544,986	+				-0.2
6,544,987	-				-0.8
6,544,987	-				+1.0
6,544,987	-				+0.5
6,544,987	-				+0.4
6,544,987	-				+0.2
6,545,031	-				+0.6
6,545,063	-				+0.1
6,545,107	-				-0.2