Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28825

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
6,392,122	-		QEN71_RS28820	0.85	+1.6
6,392,122	-		QEN71_RS28820	0.85	+1.3
6,392,122	-		QEN71_RS28820	0.85	+1.6
6,392,230	+				+2.5
6,392,231	-				+3.0
6,392,336	-				+1.1
6,392,409	-				-0.5
6,392,422	-				+0.4
6,392,422	-				-0.1
6,392,425	-				-0.2
6,392,425	-				+0.9
6,392,573	+				-0.2
6,392,573	+				+1.2
6,392,573	+				+0.3
6,392,573	+				-0.5
6,392,573	+				-0.2
6,392,611	+				+1.0
6,392,611	+				-0.5
6,392,612	-				-0.0
6,392,653	+				+0.3
6,392,653	+				-0.6
6,392,653	+				+0.9
6,392,653	+				-1.3
6,392,653	+				-2.0
6,392,653	+				-0.0
6,392,654	-				-2.0
6,392,654	-				+0.3
6,392,654	-				-0.2
6,392,654	-				+0.0
6,392,654	-				-1.0
6,392,654	-				+1.0
6,392,711	+				+0.3
6,392,712	-				-0.2
6,392,712	-				+0.3
6,392,712	-				-0.2
6,392,712	-				-0.6
6,392,712	-				+0.2
6,392,712	-				-0.3
6,392,737	+				-0.1
6,392,738	-				-0.5
6,392,832	+				-0.5
6,392,832	+				-1.0
6,392,939	+				-1.5
6,392,939	+				-0.3
6,392,939	+				-0.9
6,392,940	-				+0.5
6,392,940	-				+0.5
6,392,948	+				+0.1
6,392,948	+				+0.1
6,392,949	-				+1.1
6,392,949	-				+1.2
6,392,949	-				+0.9
6,393,010	+				+0.7
6,393,010	+				+0.7
6,393,010	+				+0.1
6,393,010	+				+1.8
6,393,010	+				+1.2
6,393,011	-				+0.6
6,393,011	-				+0.7
6,393,011	-				+0.1
6,393,017	+				+0.7
6,393,017	+				+0.3
6,393,017	+				-0.1
6,393,017	+				-0.4
6,393,017	+				+0.8
6,393,017	+				-0.2
6,393,017	+				+0.5
6,393,017	+				+0.5
6,393,017	+				-0.5
6,393,017	+				-0.7
6,393,017	+				-0.1
6,393,017	+				-0.4
6,393,017	+				+0.5
6,393,017	+				-0.9
6,393,017	+				+1.3
6,393,017	+				+0.6
6,393,018	-				+1.6
6,393,018	-				+0.9
6,393,018	-				+0.7
6,393,018	-				+0.8
6,393,018	-				+0.4
6,393,018	-				+0.5
6,393,018	-				+1.5
6,393,018	-				+2.6
6,393,019	+				-0.3
6,393,019	+				+0.4
6,393,019	+				-1.3
6,393,019	+				-0.7
6,393,019	+				+1.5
6,393,019	+				-0.9
6,393,019	+				+0.1
6,393,019	+				+0.4
6,393,019	+				-1.6
6,393,019	+				-0.9
6,393,019	+				+0.1
6,393,019	+				-0.6
6,393,019	+				-0.8
6,393,019	+				-0.8
6,393,019	+				+0.2
6,393,019	+				-0.2
6,393,020	-				+1.1
6,393,020	-				+0.7
6,393,020	-				+2.0
6,393,020	-				+0.8
6,393,020	-				+1.5
6,393,020	-				+1.4
6,393,020	-				+0.7
6,393,020	-				+1.4
6,393,020	-				+1.0
6,393,020	-				+0.7
6,393,020	-				+1.8
6,393,020	-				+0.8
6,393,020	-				+1.1
6,393,020	-				+2.0
6,393,020	-				+1.0
6,393,122	+		QEN71_RS28825	0.17	-1.0
6,393,122	+		QEN71_RS28825	0.17	+0.7
6,393,123	-		QEN71_RS28825	0.18	+1.2
6,393,123	-		QEN71_RS28825	0.18	+1.9
6,393,123	-		QEN71_RS28825	0.18	+2.0
6,393,286	+		QEN71_RS28825	0.50	+0.9
6,393,286	+		QEN71_RS28825	0.50	+0.5
6,393,286	+		QEN71_RS28825	0.50	+0.2
6,393,286	+		QEN71_RS28825	0.50	+1.5
6,393,286	+		QEN71_RS28825	0.50	+0.6
6,393,286	+		QEN71_RS28825	0.50	-0.4
6,393,286	+		QEN71_RS28825	0.50	+1.8
6,393,286	+		QEN71_RS28825	0.50	+0.9
6,393,286	+		QEN71_RS28825	0.50	+0.8
6,393,286	+		QEN71_RS28825	0.50	+1.1
6,393,286	+		QEN71_RS28825	0.50	+1.2
6,393,287	-		QEN71_RS28825	0.50	+1.9
6,393,287	-		QEN71_RS28825	0.50	+1.6
6,393,287	-		QEN71_RS28825	0.50	+1.4
6,393,287	-		QEN71_RS28825	0.50	+0.1
6,393,287	-		QEN71_RS28825	0.50	+1.1
6,393,287	-		QEN71_RS28825	0.50	+2.4
6,393,287	-		QEN71_RS28825	0.50	+1.3
6,393,287	-		QEN71_RS28825	0.50	+0.7
6,393,287	-		QEN71_RS28825	0.50	+1.0
6,393,351	+		QEN71_RS28825	0.63	+0.8
6,393,351	+		QEN71_RS28825	0.63	+1.7
6,393,351	+		QEN71_RS28825	0.63	+0.6
6,393,351	+		QEN71_RS28825	0.63	+0.7
6,393,351	+		QEN71_RS28825	0.63	+0.2
6,393,351	+		QEN71_RS28825	0.63	+0.3
6,393,351	+		QEN71_RS28825	0.63	-0.1
6,393,352	-		QEN71_RS28825	0.63	+1.2
6,393,352	-		QEN71_RS28825	0.63	+0.6
6,393,352	-		QEN71_RS28825	0.63	+1.0
6,393,352	-		QEN71_RS28825	0.63	-0.1
6,393,598	+				+1.3
6,393,598	+				+0.0
6,393,598	+				+0.7
6,393,598	+				-0.4
6,393,599	-				+1.5
6,393,714	+		QEN71_RS28830	0.11	+1.4
6,393,714	+		QEN71_RS28830	0.11	+1.2
6,393,715	-		QEN71_RS28830	0.11	+1.3
6,393,715	-		QEN71_RS28830	0.11	+0.9
6,393,715	-		QEN71_RS28830	0.11	+1.2
6,393,715	-		QEN71_RS28830	0.11	+0.7
6,393,715	-		QEN71_RS28830	0.11	-0.1
6,393,715	-		QEN71_RS28830	0.11	-0.1
6,393,715	-		QEN71_RS28830	0.11	+1.5
6,393,867	+		QEN71_RS28830	0.26	+2.0
6,393,867	+		QEN71_RS28830	0.26	+1.0
6,393,867	+		QEN71_RS28830	0.26	+1.4
6,393,867	+		QEN71_RS28830	0.26	+1.0
6,393,868	-		QEN71_RS28830	0.27	+0.4
6,393,868	-		QEN71_RS28830	0.27	+0.2
6,393,868	-		QEN71_RS28830	0.27	+1.6
6,394,016	+		QEN71_RS28830	0.41	+1.0
6,394,095	+		QEN71_RS28830	0.49	+1.8
6,394,095	+		QEN71_RS28830	0.49	+0.5
6,394,096	-		QEN71_RS28830	0.49	+1.4
6,394,096	-		QEN71_RS28830	0.49	+1.2
6,394,096	-		QEN71_RS28830	0.49	+1.0
6,394,096	-		QEN71_RS28830	0.49	+0.9
6,394,137	+		QEN71_RS28830	0.53	+0.7
6,394,137	+		QEN71_RS28830	0.53	+2.2
6,394,137	+		QEN71_RS28830	0.53	+1.3
6,394,138	-		QEN71_RS28830	0.54	+2.0
6,394,138	-		QEN71_RS28830	0.54	+0.6
6,394,138	-		QEN71_RS28830	0.54	+0.6
6,394,138	-		QEN71_RS28830	0.54	+1.0
6,394,247	+		QEN71_RS28830	0.64	+0.5
6,394,247	+		QEN71_RS28830	0.64	+1.3
6,394,247	+		QEN71_RS28830	0.64	+1.0
6,394,247	+		QEN71_RS28830	0.64	+1.0
6,394,247	+		QEN71_RS28830	0.64	+0.4
6,394,247	+		QEN71_RS28830	0.64	-0.2
6,394,247	+		QEN71_RS28830	0.64	+1.2
6,394,247	+		QEN71_RS28830	0.64	+1.6
6,394,247	+		QEN71_RS28830	0.64	+2.0
6,394,247	+		QEN71_RS28830	0.64	+1.8
6,394,247	+		QEN71_RS28830	0.64	+2.3
6,394,247	+		QEN71_RS28830	0.64	+1.0
6,394,247	+		QEN71_RS28830	0.64	+0.6
6,394,247	+		QEN71_RS28830	0.64	+1.3
6,394,247	+		QEN71_RS28830	0.64	+1.3
6,394,247	+		QEN71_RS28830	0.64	+0.8
6,394,248	-		QEN71_RS28830	0.65	+0.8
6,394,248	-		QEN71_RS28830	0.65	+1.4
6,394,248	-		QEN71_RS28830	0.65	+1.0
6,394,248	-		QEN71_RS28830	0.65	+1.0
6,394,248	-		QEN71_RS28830	0.65	+0.9
6,394,248	-		QEN71_RS28830	0.65	+1.7
6,394,248	-		QEN71_RS28830	0.65	+1.2
6,394,248	-		QEN71_RS28830	0.65	+0.8
6,394,248	-		QEN71_RS28830	0.65	+0.4
6,394,248	-		QEN71_RS28830	0.65	+0.0
6,394,248	-		QEN71_RS28830	0.65	+0.8
6,394,248	-		QEN71_RS28830	0.65	+0.3
6,394,248	-		QEN71_RS28830	0.65	+1.1
6,394,248	-		QEN71_RS28830	0.65	+1.6
6,394,248	-		QEN71_RS28830	0.65	+1.1
6,394,248	-		QEN71_RS28830	0.65	+0.8
6,394,248	-		QEN71_RS28830	0.65	+1.7
6,394,248	-		QEN71_RS28830	0.65	+1.1
6,394,260	+		QEN71_RS28830	0.66	+2.2
6,394,260	+		QEN71_RS28830	0.66	+0.0
6,394,261	-		QEN71_RS28830	0.66	+1.4
6,394,536	+				+2.5
6,394,536	+				+1.0
6,394,536	+				+1.1
6,394,536	+				+1.8
6,394,537	-				+1.4