Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28035

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
6,234,351	+		QEN71_RS28030	0.36	-0.2
6,234,372	+		QEN71_RS28030	0.38	-0.1
6,234,372	+		QEN71_RS28030	0.38	+0.1
6,234,372	+		QEN71_RS28030	0.38	-0.0
6,234,373	-		QEN71_RS28030	0.38	+0.6
6,234,373	-		QEN71_RS28030	0.38	+0.1
6,234,373	-		QEN71_RS28030	0.38	-0.7
6,234,386	+		QEN71_RS28030	0.39	-0.0
6,234,386	+		QEN71_RS28030	0.39	-0.0
6,234,387	-		QEN71_RS28030	0.39	-0.8
6,234,387	-		QEN71_RS28030	0.39	+0.7
6,234,387	-		QEN71_RS28030	0.39	+0.5
6,234,459	+		QEN71_RS28030	0.45	-0.6
6,234,460	-		QEN71_RS28030	0.45	+0.7
6,234,460	-		QEN71_RS28030	0.45	+0.2
6,234,627	+		QEN71_RS28030	0.59	-0.7
6,234,628	-		QEN71_RS28030	0.59	-0.2
6,234,739	+		QEN71_RS28030	0.69	+0.0
6,234,739	+		QEN71_RS28030	0.69	-1.1
6,234,739	+		QEN71_RS28030	0.69	+0.2
6,234,740	-		QEN71_RS28030	0.69	-1.3
6,234,740	-		QEN71_RS28030	0.69	-0.7
6,234,853	+		QEN71_RS28030	0.78	-0.1
6,234,853	+		QEN71_RS28030	0.78	-0.2
6,234,854	-		QEN71_RS28030	0.78	-0.1
6,234,897	+		QEN71_RS28030	0.82	-0.5
6,234,897	+		QEN71_RS28030	0.82	+1.9
6,234,897	+		QEN71_RS28030	0.82	-0.4
6,234,897	+		QEN71_RS28030	0.82	+0.9
6,234,898	-		QEN71_RS28030	0.82	+0.3
6,234,898	-		QEN71_RS28030	0.82	+0.2
6,234,898	-		QEN71_RS28030	0.82	-0.4
6,234,898	-		QEN71_RS28030	0.82	+0.5
6,234,898	-		QEN71_RS28030	0.82	-0.4
6,234,898	-		QEN71_RS28030	0.82	+0.1
6,235,020	+				-0.2
6,235,021	-				+0.5
6,235,021	-				-1.4
6,235,124	+				+0.1
6,235,124	+				+0.5
6,235,124	+				-1.3
6,235,124	+				-0.2
6,235,124	+				+0.1
6,235,124	+				-0.2
6,235,125	-				+0.5
6,235,125	-				+0.3
6,235,125	-				-0.1
6,235,125	-				-0.1
6,235,125	-				-0.9
6,235,139	+				+1.7
6,235,139	+				+0.9
6,235,139	+				-0.2
6,235,139	+				-1.4
6,235,140	-				-0.1
6,235,168	+				-0.6
6,235,168	+				-0.4
6,235,168	+				+0.1
6,235,168	+				-0.3
6,235,168	+				-0.3
6,235,168	+				-1.1
6,235,168	+				-0.7
6,235,168	+				+0.4
6,235,168	+				+0.2
6,235,168	+				-0.6
6,235,168	+				-2.2
6,235,169	-				-0.9
6,235,169	-				-0.2
6,235,169	-				+0.1
6,235,169	-				-0.5
6,235,169	-				+0.4
6,235,169	-				-0.7
6,235,169	-				+0.7
6,235,332	+		QEN71_RS28035	0.13	-1.2
6,235,332	+		QEN71_RS28035	0.13	-3.9
6,235,333	-		QEN71_RS28035	0.13	-1.7
6,235,800	+		QEN71_RS28035	0.56	-0.5
6,235,800	+		QEN71_RS28035	0.56	-3.7
6,235,800	+		QEN71_RS28035	0.56	-3.1
6,235,800	+		QEN71_RS28035	0.56	-1.2
6,235,801	-		QEN71_RS28035	0.56	-2.1
6,235,801	-		QEN71_RS28035	0.56	-3.7
6,235,801	-		QEN71_RS28035	0.56	-4.0
6,235,801	-		QEN71_RS28035	0.56	-3.5
6,235,801	-		QEN71_RS28035	0.56	-3.7
6,235,920	+		QEN71_RS28035	0.67	-0.0
6,235,920	+		QEN71_RS28035	0.67	+0.1
6,235,920	+		QEN71_RS28035	0.67	-2.4
6,235,920	+		QEN71_RS28035	0.67	-4.3
6,235,920	+		QEN71_RS28035	0.67	-1.2
6,235,920	+		QEN71_RS28035	0.67	-4.6
6,235,920	+		QEN71_RS28035	0.67	-5.0
6,235,920	+		QEN71_RS28035	0.67	-2.7
6,235,920	+		QEN71_RS28035	0.67	-3.3
6,235,921	-		QEN71_RS28035	0.67	-3.3
6,235,921	-		QEN71_RS28035	0.67	-3.2
6,235,921	-		QEN71_RS28035	0.67	-2.6
6,235,921	-		QEN71_RS28035	0.67	-2.8
6,235,921	-		QEN71_RS28035	0.67	-2.9
6,235,921	-		QEN71_RS28035	0.67	-3.2
6,235,921	-		QEN71_RS28035	0.67	-1.4
6,235,921	-		QEN71_RS28035	0.67	-5.0
6,235,921	-		QEN71_RS28035	0.67	-0.7
6,235,921	-		QEN71_RS28035	0.67	-0.9
6,235,921	-		QEN71_RS28035	0.67	-3.6
6,235,921	-		QEN71_RS28035	0.67	-3.9
6,235,921	-		QEN71_RS28035	0.67	-3.6
6,236,049	+		QEN71_RS28035	0.79	-2.5
6,236,049	+		QEN71_RS28035	0.79	-4.1
6,236,049	+		QEN71_RS28035	0.79	-3.2
6,236,049	+		QEN71_RS28035	0.79	-3.7
6,236,049	+		QEN71_RS28035	0.79	-0.9
6,236,049	+		QEN71_RS28035	0.79	-2.7
6,236,050	-		QEN71_RS28035	0.79	-3.2
6,236,050	-		QEN71_RS28035	0.79	-3.3
6,236,050	-		QEN71_RS28035	0.79	-2.5
6,236,050	-		QEN71_RS28035	0.79	-2.1
6,236,050	-		QEN71_RS28035	0.79	-3.5
6,236,050	-		QEN71_RS28035	0.79	-4.6
6,236,127	+		QEN71_RS28035	0.86	-4.4
6,236,128	-		QEN71_RS28035	0.86	-2.6
6,236,128	-		QEN71_RS28035	0.86	-0.2
6,236,128	-		QEN71_RS28035	0.86	-2.7
6,236,235	+				-3.9
6,236,236	-				-0.5
6,236,266	+				-1.5
6,236,290	+				-0.5
6,236,290	+				-2.3
6,236,290	+				-1.5
6,236,290	+				-3.3
6,236,290	+				-2.5
6,236,290	+				-3.3
6,236,290	+				-0.5
6,236,291	-				-0.1
6,236,291	-				+0.4
6,236,300	+				-4.0
6,236,300	+				-2.8
6,236,300	+				+0.1
6,236,300	+				-5.5
6,236,301	-				-1.2
6,236,301	-				-1.1
6,236,301	-				+0.0
6,236,301	-				+0.7
6,236,425	+		QEN71_RS28040	0.25	-1.1
6,236,425	+		QEN71_RS28040	0.25	-1.8
6,236,425	+		QEN71_RS28040	0.25	-2.4
6,236,425	+		QEN71_RS28040	0.25	-4.2
6,236,425	+		QEN71_RS28040	0.25	-0.7
6,236,426	-		QEN71_RS28040	0.25	-3.6
6,236,426	-		QEN71_RS28040	0.25	-1.7
6,236,426	-		QEN71_RS28040	0.25	-4.4
6,236,426	-		QEN71_RS28040	0.25	-2.5
6,236,426	-		QEN71_RS28040	0.25	-3.4
6,236,426	-		QEN71_RS28040	0.25	-2.5
6,236,426	-		QEN71_RS28040	0.25	-2.8
6,236,426	-		QEN71_RS28040	0.25	-1.6
6,236,426	-		QEN71_RS28040	0.25	+0.1
6,236,492	+		QEN71_RS28040	0.37	-2.6
6,236,492	+		QEN71_RS28040	0.37	-2.2
6,236,493	-		QEN71_RS28040	0.37	-2.0
6,236,527	+		QEN71_RS28040	0.43	-4.6
6,236,527	-		QEN71_RS28040	0.43	-1.1
6,236,528	-		QEN71_RS28040	0.43	-2.1
6,236,528	-		QEN71_RS28040	0.43	-1.1
6,236,528	-		QEN71_RS28040	0.43	-4.5
6,236,802	+				-4.3
6,236,802	+				-3.9
6,236,803	-				-1.5
6,236,843	+				-1.5
6,236,843	+				-0.9
6,236,843	+				-1.2
6,236,843	+				-1.5
6,236,843	+				-3.2
6,236,844	-				-3.0
6,236,844	-				-3.7
6,236,844	-				-1.9
6,236,844	-				-3.4
6,236,853	+				-0.7
6,236,853	+				-4.4
6,236,854	-				+0.1
6,236,854	-				-0.3
6,236,863	+				-4.0
6,236,863	+				-3.4
6,236,863	+				-0.7
6,236,863	+				-2.8
6,236,863	+				-2.5
6,236,863	+				-0.5
6,236,863	+				-1.6
6,236,864	-				-1.7
6,236,864	-				+1.0
6,236,864	-				+0.3
6,236,864	-				+0.1
6,236,864	-				-1.6
6,237,084	+				+0.7
6,237,085	-				+0.3
6,237,137	-				-0.1
6,237,137	-				+1.0
6,237,137	-				+1.5
6,237,137	-				+0.2
6,237,137	-				+0.2
6,237,200	+		QEN71_RS28045	0.14	+0.3
6,237,200	+		QEN71_RS28045	0.14	-1.0
6,237,200	+		QEN71_RS28045	0.14	-0.7
6,237,200	+		QEN71_RS28045	0.14	-0.1
6,237,201	-		QEN71_RS28045	0.14	-0.6
6,237,201	-		QEN71_RS28045	0.14	-0.6