Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28005

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
6,223,848	+				-0.0
6,223,849	-				+0.2
6,223,849	-				-0.9
6,223,849	-				+2.1
6,223,871	+				-0.3
6,223,872	-				+1.5
6,223,872	-				+0.5
6,223,872	-				+0.8
6,223,936	+				-1.4
6,223,936	+				-0.2
6,223,936	+				+0.4
6,223,936	+				+0.2
6,223,936	+				+0.1
6,223,936	+				+0.8
6,223,936	+				+0.1
6,223,936	+				+0.9
6,223,936	+				-0.7
6,223,937	-				+1.0
6,223,937	-				-0.6
6,223,937	-				+0.1
6,223,977	-				-3.6
6,224,007	-				+0.4
6,224,007	-				+0.3
6,224,039	+		QEN71_RS28000	0.11	-1.5
6,224,039	+		QEN71_RS28000	0.11	+0.1
6,224,040	-		QEN71_RS28000	0.11	-0.2
6,224,040	-		QEN71_RS28000	0.11	-1.2
6,224,040	-		QEN71_RS28000	0.11	+0.1
6,224,040	-		QEN71_RS28000	0.11	+0.3
6,224,040	-		QEN71_RS28000	0.11	-0.3
6,224,040	-		QEN71_RS28000	0.11	+1.7
6,224,040	-		QEN71_RS28000	0.11	-0.4
6,224,374	-		QEN71_RS28000	0.63	+0.5
6,224,402	+		QEN71_RS28000	0.67	+1.4
6,224,495	+		QEN71_RS28000	0.82	-0.3
6,224,495	+		QEN71_RS28000	0.82	+0.3
6,224,495	+		QEN71_RS28000	0.82	-1.8
6,224,496	-		QEN71_RS28000	0.82	+0.3
6,224,496	-		QEN71_RS28000	0.82	-1.1
6,224,496	-		QEN71_RS28000	0.82	+0.2
6,224,496	-		QEN71_RS28000	0.82	-0.8
6,224,620	+				-0.6
6,224,620	+				-2.0
6,224,621	-				+1.1
6,224,621	-				+0.3
6,224,621	-				-0.0
6,224,621	-				-1.6
6,224,621	-				-0.6
6,224,621	-				+0.0
6,224,658	-				+1.0
6,224,721	+				-1.1
6,224,721	+				-1.2
6,224,721	+				-0.2
6,224,721	+				-0.9
6,224,722	-				-0.7
6,224,722	-				+0.8
6,224,722	-				+0.6
6,224,722	-				+0.6
6,224,722	-				+0.7
6,224,738	+				-0.7
6,224,739	-				+0.3
6,224,811	+				+0.9
6,224,811	+				+0.7
6,224,811	+				-2.1
6,224,811	+				-0.9
6,224,811	+				+0.3
6,224,811	+				+1.2
6,224,811	+				+0.6
6,224,811	+				+1.6
6,224,811	+				+0.0
6,224,811	+				-0.5
6,224,811	+				+0.8
6,224,811	+				+1.5
6,224,811	+				-0.4
6,224,811	+				-0.3
6,224,812	-				-0.1
6,224,812	-				+0.1
6,224,812	-				-0.5
6,224,812	-				+1.1
6,224,812	-				+0.1
6,224,812	-				-0.7
6,224,812	-				+0.3
6,224,812	-				-0.4
6,224,812	-				-0.2
6,224,812	-				-0.2
6,224,812	-				-0.2
6,224,812	-				+0.5
6,224,812	-				+0.8
6,224,812	-				-0.7
6,224,812	-				+0.5
6,224,812	-				+0.7
6,224,812	-				+0.5
6,224,813	+				+1.5
6,224,813	+				-0.0
6,224,813	+				+0.9
6,224,813	+				+0.1
6,224,813	+				-0.3
6,224,813	+				-0.5
6,224,813	+				-0.0
6,224,813	+				+0.5
6,224,814	-				-0.5
6,224,814	-				+1.0
6,224,814	-				+0.2
6,224,814	-				-0.4
6,224,814	-				-0.9
6,224,814	-				-0.1
6,224,814	-				-2.3
6,224,814	-				+0.1
6,224,814	-				-0.2
6,224,814	-				-0.5
6,224,814	-				-0.3
6,224,814	-				-1.7
6,224,814	-				+0.3
6,224,827	+				-0.1
6,224,828	-				+1.5
6,224,837	-				-0.6
6,224,866	+				-3.5
6,224,866	+				-2.9
6,224,867	-				-3.8
6,224,867	-				-0.7
6,224,867	-				-1.1
6,224,974	+				-1.2
6,224,974	+				+0.3
6,224,974	+				-2.1
6,224,974	+				-1.9
6,224,974	+				-1.8
6,224,974	+				-2.9
6,224,974	+				-4.0
6,224,974	+				-2.9
6,224,974	+				-1.7
6,224,974	+				-2.3
6,224,974	+				-0.9
6,224,975	-				-3.7
6,224,975	-				-2.1
6,224,975	-				-3.7
6,224,975	-				-1.9
6,224,975	-				+0.1
6,224,975	-				-4.1
6,224,975	-				-3.9
6,224,975	-				-2.4
6,224,975	-				-3.7
6,224,975	-				-0.5
6,224,975	-				-0.7
6,224,975	-				-3.1
6,224,975	-				-2.1
6,224,975	-				-2.8
6,224,975	-				-2.8
6,224,975	-				-1.4
6,224,975	-				-2.2
6,224,977	+				-2.4
6,224,977	+				-3.0
6,224,978	-				-2.7
6,224,978	-				-0.7
6,224,978	-				-0.7
6,224,978	-				-2.1
6,224,978	-				-1.5
6,224,978	-				-3.5
6,224,978	-				-3.0
6,225,068	+		QEN71_RS28005	0.16	-3.4
6,225,068	+		QEN71_RS28005	0.16	-0.7
6,225,277	+		QEN71_RS28005	0.30	-0.2
6,225,368	+		QEN71_RS28005	0.36	-0.7
6,225,369	-		QEN71_RS28005	0.36	-5.2
6,225,496	+		QEN71_RS28005	0.45	-1.7
6,225,496	+		QEN71_RS28005	0.45	-2.5
6,225,497	-		QEN71_RS28005	0.45	-2.3
6,225,620	+		QEN71_RS28005	0.54	-1.7
6,225,621	-		QEN71_RS28005	0.54	-2.5
6,226,222	+				-1.1
6,226,222	+				-1.5
6,226,222	+				-0.9
6,226,222	+				-4.7
6,226,222	+				-1.8
6,226,223	-				-3.4
6,226,223	-				-0.2
6,226,223	-				-1.1
6,226,223	-				-3.9
6,226,223	-				-2.8
6,226,252	+				-1.8
6,226,252	+				-1.8
6,226,252	+				-2.9
6,226,253	-				-0.2
6,226,253	-				-0.9
6,226,253	-				-0.2
6,226,253	-				-1.1
6,226,311	+				-4.2
6,226,311	+				-2.9
6,226,311	+				-2.2
6,226,311	+				-1.1
6,226,312	-				-3.1
6,226,312	-				-1.6
6,226,312	-				-1.2
6,226,312	-				+0.5
6,226,312	-				-3.0
6,226,312	-				-3.2
6,226,312	-				-3.4
6,226,312	-				+0.5
6,226,312	-				-3.9
6,226,312	-				-0.1
6,226,312	-				-1.2
6,226,312	-				-2.6
6,226,317	+				-2.3
6,226,317	+				-2.4
6,226,317	+				-2.3
6,226,317	+				-2.0
6,226,317	+				-2.7
6,226,318	-				-0.7
6,226,318	-				-0.2
6,226,318	-				-2.9
6,226,318	-				-0.3
6,226,318	-				-3.7
6,226,318	-				-0.5
6,226,318	-				+0.0
6,226,385	+				-0.9
6,226,385	+				-2.8
6,226,385	+				-2.1
6,226,385	+				+1.1
6,226,385	+				-1.1
6,226,385	+				-3.5
6,226,385	+				-1.5
6,226,385	+				-1.2
6,226,386	-				-0.0
6,226,386	-				-1.8
6,226,386	-				-0.6
6,226,386	-				-0.7
6,226,386	-				-0.3
6,226,386	-				-0.2
6,226,386	-				+1.1
6,226,386	-				+0.1
6,226,386	-				-0.4
6,226,473	+				-1.7
6,226,473	+				-2.8
6,226,473	+				-0.8
6,226,474	-				-1.8
6,226,474	-				-0.4
6,226,474	-				+0.8
6,226,474	-				-0.5
6,226,474	-				-0.2
6,226,728	+				-0.7
6,226,728	+				-3.7
6,226,728	+				-2.9
6,226,728	+				-1.5
6,226,729	-				-3.4
6,226,729	-				-1.7
6,226,762	+				-1.7
6,226,763	-				-3.9
6,226,763	-				-0.9
6,226,763	-				-0.1
6,226,807	-				-4.3
6,226,807	-				-1.7
6,226,807	-				-0.9
6,226,807	-				-3.5
6,226,807	-				-4.1
6,226,807	-				-1.2
6,226,807	-				-3.3
6,226,807	-				-0.2
6,226,807	-				-4.0
6,226,858	+				-3.6
6,226,858	+				-0.9
6,226,859	-				-2.2
6,226,920	+		QEN71_RS28010	0.11	-0.2
6,226,920	+		QEN71_RS28010	0.11	-0.2
6,226,920	+		QEN71_RS28010	0.11	-1.9
6,227,022	+		QEN71_RS28010	0.13	-3.4
6,227,022	+		QEN71_RS28010	0.13	-3.9
6,227,022	+		QEN71_RS28010	0.13	-2.4
6,227,022	+		QEN71_RS28010	0.13	-2.8
6,227,023	-		QEN71_RS28010	0.13	-1.6
6,227,023	-		QEN71_RS28010	0.13	-2.0
6,227,145	+		QEN71_RS28010	0.16	-2.4
6,227,145	+		QEN71_RS28010	0.16	-2.8
6,227,145	+		QEN71_RS28010	0.16	-0.2