Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS27835

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
6,193,343	+		QEN71_RS27820	0.73	+0.7
6,193,343	+		QEN71_RS27820	0.73	-1.1
6,193,343	+		QEN71_RS27820	0.73	-0.0
6,193,343	+		QEN71_RS27820	0.73	+0.2
6,193,344	-		QEN71_RS27820	0.73	+0.2
6,193,344	-		QEN71_RS27820	0.73	-1.2
6,193,344	-		QEN71_RS27820	0.73	-0.2
6,193,352	+		QEN71_RS27820	0.75	-2.9
6,193,352	+		QEN71_RS27820	0.75	-0.3
6,193,352	+		QEN71_RS27820	0.75	-0.6
6,193,352	+		QEN71_RS27820	0.75	-0.8
6,193,353	-		QEN71_RS27820	0.76	-1.5
6,193,353	-		QEN71_RS27820	0.76	+0.5
6,193,353	-		QEN71_RS27820	0.76	+0.4
6,193,353	-		QEN71_RS27820	0.76	-0.7
6,193,412	+				+1.4
6,193,412	+				+0.5
6,193,413	-				-0.5
6,193,836	+		QEN71_RS27825	0.75	-2.1
6,193,836	+		QEN71_RS27825	0.75	-2.6
6,193,836	+		QEN71_RS27825	0.75	-4.2
6,193,836	+		QEN71_RS27825	0.75	-1.6
6,193,836	+		QEN71_RS27825	0.75	-3.8
6,193,837	-		QEN71_RS27825	0.76	-4.1
6,193,837	-		QEN71_RS27825	0.76	-0.9
6,193,837	-		QEN71_RS27825	0.76	-3.9
6,193,837	-		QEN71_RS27825	0.76	-3.8
6,193,837	-		QEN71_RS27825	0.76	-3.1
6,193,837	-		QEN71_RS27825	0.76	-2.7
6,193,837	-		QEN71_RS27825	0.76	-2.1
6,193,915	+				-3.3
6,193,915	+				-3.4
6,193,915	+				-0.9
6,193,916	-				-3.0
6,193,916	-				-2.8
6,193,916	-				-3.2
6,193,931	+				-2.4
6,193,931	+				-4.4
6,193,931	+				-2.6
6,193,931	+				-2.5
6,193,931	+				-0.5
6,193,931	+				-2.3
6,193,931	+				-4.1
6,193,931	+				-5.0
6,193,931	+				-4.7
6,193,931	+				-3.0
6,193,931	+				-2.3
6,193,931	+				-3.5
6,193,931	+				-2.1
6,193,931	+				-2.5
6,193,931	+				-4.7
6,193,931	+				-2.3
6,193,932	-				-0.2
6,193,932	-				+0.5
6,193,932	-				-2.2
6,193,932	-				+0.7
6,193,932	-				-0.6
6,193,932	-				+0.7
6,193,932	-				-0.8
6,193,932	-				-0.2
6,193,932	-				+1.5
6,193,932	-				-0.8
6,193,932	-				-1.6
6,193,932	-				-0.7
6,193,932	-				-0.5
6,193,932	-				-0.4
6,193,932	-				-1.1
6,193,932	-				+0.1
6,194,171	+		QEN71_RS27830	0.60	-3.9
6,194,171	+		QEN71_RS27830	0.60	-1.2
6,194,171	+		QEN71_RS27830	0.60	-0.9
6,194,172	-		QEN71_RS27830	0.60	-3.2
6,194,172	-		QEN71_RS27830	0.60	-3.8
6,194,337	+				-3.7
6,194,337	+				-0.5
6,194,337	+				-2.9
6,194,337	+				-4.1
6,194,337	+				-1.7
6,194,337	+				-0.7
6,194,337	+				-2.4
6,194,337	+				-1.5
6,194,337	+				-4.4
6,194,337	+				-2.7
6,194,337	+				-3.5
6,194,337	+				-2.8
6,194,337	+				-2.1
6,194,338	-				-1.0
6,194,338	-				-1.3
6,194,338	-				-1.0
6,194,338	-				-0.9
6,194,338	-				-1.1
6,194,338	-				+0.1
6,194,403	+				-2.4
6,194,403	+				-0.9
6,194,404	-				-0.7
6,194,404	-				-3.4
6,194,404	-				-0.9
6,194,748	+		QEN71_RS27835	0.53	-3.0
6,194,748	+		QEN71_RS27835	0.53	+0.1
6,194,748	+		QEN71_RS27835	0.53	-2.4
6,194,748	+		QEN71_RS27835	0.53	-1.2
6,194,748	+		QEN71_RS27835	0.53	-2.6
6,194,748	+		QEN71_RS27835	0.53	-2.5
6,194,748	+		QEN71_RS27835	0.53	-1.2
6,194,748	+		QEN71_RS27835	0.53	-2.3
6,194,748	+		QEN71_RS27835	0.53	-2.3
6,194,748	+		QEN71_RS27835	0.53	-0.7
6,194,748	+		QEN71_RS27835	0.53	-3.3
6,194,749	-		QEN71_RS27835	0.53	-4.4
6,194,749	-		QEN71_RS27835	0.53	-0.2
6,194,749	-		QEN71_RS27835	0.53	-2.9
6,194,749	-		QEN71_RS27835	0.53	-3.0
6,194,749	-		QEN71_RS27835	0.53	-1.1
6,194,749	-		QEN71_RS27835	0.53	-2.6
6,194,749	-		QEN71_RS27835	0.53	-4.1
6,194,749	-		QEN71_RS27835	0.53	-2.5
6,194,749	-		QEN71_RS27835	0.53	-1.2
6,194,749	-		QEN71_RS27835	0.53	-2.3
6,194,752	+		QEN71_RS27835	0.54	-1.5
6,194,752	+		QEN71_RS27835	0.54	-3.9
6,194,752	+		QEN71_RS27835	0.54	-5.2
6,194,752	+		QEN71_RS27835	0.54	-3.1
6,194,951	+		QEN71_RS27835	0.79	-2.3
6,194,951	+		QEN71_RS27835	0.79	-1.5
6,194,951	+		QEN71_RS27835	0.79	-3.0
6,194,951	+		QEN71_RS27835	0.79	-2.1
6,194,951	+		QEN71_RS27835	0.79	-4.1
6,194,951	+		QEN71_RS27835	0.79	-2.5
6,194,952	-		QEN71_RS27835	0.80	-2.5
6,194,952	-		QEN71_RS27835	0.80	-1.2
6,194,952	-		QEN71_RS27835	0.80	-2.3
6,194,953	+		QEN71_RS27835	0.80	-3.3
6,194,953	+		QEN71_RS27835	0.80	-0.9
6,194,954	-		QEN71_RS27835	0.80	+1.1
6,194,954	-		QEN71_RS27835	0.80	-2.5
6,194,954	-		QEN71_RS27835	0.80	-2.9
6,194,954	-		QEN71_RS27835	0.80	-2.8
6,194,954	-		QEN71_RS27835	0.80	-1.3
6,194,991	+		QEN71_RS27835	0.85	-2.9
6,194,991	+		QEN71_RS27835	0.85	-3.2
6,194,992	-		QEN71_RS27835	0.85	-4.7
6,194,992	-		QEN71_RS27835	0.85	-1.3
6,195,097	+				-4.5
6,195,097	+				-2.0
6,195,097	+				-0.7
6,195,097	+				-2.2
6,195,097	+				-0.7
6,195,097	+				-2.1
6,195,098	-				-2.7
6,195,098	-				-2.2
6,195,101	+				-0.5
6,195,101	+				-1.1
6,195,101	+				-3.2
6,195,102	-				-1.6
6,195,102	-				-2.2
6,195,102	-				+0.1
6,195,102	-				+0.6
6,195,102	-				-0.1
6,195,102	-				-1.2
6,195,102	-				-1.1
6,195,118	+				-4.5
6,195,118	+				-0.3
6,195,118	+				-2.7
6,195,118	+				-2.8
6,195,118	+				-2.0
6,195,118	+				-2.1
6,195,118	+				-0.2
6,195,118	+				-1.0
6,195,119	-				+0.4
6,195,119	-				+1.3
6,195,119	-				+0.0
6,195,119	-				-1.1
6,195,119	-				-2.6
6,195,119	-				-1.1
6,195,119	-				+0.6
6,195,119	-				-0.3
6,195,119	-				-0.7
6,195,119	-				+2.4
6,195,119	-				-1.1
6,195,119	-				+0.2
6,195,119	-				-1.2
6,195,119	-				-0.3
6,195,131	+				-0.9
6,195,132	-				-0.5
6,195,132	-				+0.1
6,195,132	-				+0.2
6,195,171	+				-3.1
6,195,171	+				-1.6
6,195,171	+				-2.5
6,195,171	+				-3.0
6,195,172	-				-1.3
6,195,205	+				-0.6
6,195,205	+				-1.9
6,195,205	+				-1.3
6,195,205	+				-1.8
6,195,205	+				+0.1
6,195,205	+				-1.3
6,195,206	-				-0.2
6,195,206	-				-0.1
6,195,206	-				+0.2
6,195,307	+				-1.5
6,195,307	+				-0.5
6,195,308	-				-2.1
6,195,308	-				-3.3
6,195,490	+		QEN71_RS27840	0.34	-1.1
6,195,490	+		QEN71_RS27840	0.34	-3.5
6,195,490	+		QEN71_RS27840	0.34	-3.1
6,195,490	+		QEN71_RS27840	0.34	-0.2
6,195,490	+		QEN71_RS27840	0.34	-3.9
6,195,490	+		QEN71_RS27840	0.34	-1.7
6,195,490	+		QEN71_RS27840	0.34	-2.1
6,195,490	+		QEN71_RS27840	0.34	-3.4
6,195,490	+		QEN71_RS27840	0.34	-1.9
6,195,490	+		QEN71_RS27840	0.34	-3.6
6,195,490	+		QEN71_RS27840	0.34	-1.8
6,195,491	-		QEN71_RS27840	0.34	-3.7
6,195,491	-		QEN71_RS27840	0.34	-2.6
6,195,491	-		QEN71_RS27840	0.34	+0.1
6,195,491	-		QEN71_RS27840	0.34	-3.9
6,195,491	-		QEN71_RS27840	0.34	-0.7
6,195,491	-		QEN71_RS27840	0.34	-2.7
6,195,491	-		QEN71_RS27840	0.34	-1.9
6,195,511	+		QEN71_RS27840	0.36	+0.3
6,195,511	+		QEN71_RS27840	0.36	-1.5
6,195,512	-		QEN71_RS27840	0.37	-2.5
6,195,512	-		QEN71_RS27840	0.37	-0.5
6,195,512	-		QEN71_RS27840	0.37	-1.6
6,195,614	+		QEN71_RS27840	0.50	+0.1
6,195,614	+		QEN71_RS27840	0.50	-1.6
6,195,614	+		QEN71_RS27840	0.50	-3.1
6,195,614	+		QEN71_RS27840	0.50	-3.1
6,195,614	+		QEN71_RS27840	0.50	-1.6
6,195,615	-		QEN71_RS27840	0.50	-3.9
6,195,615	-		QEN71_RS27840	0.50	-2.0
6,195,615	-		QEN71_RS27840	0.50	-2.1
6,195,615	-		QEN71_RS27840	0.50	-2.6
6,195,615	-		QEN71_RS27840	0.50	-3.0
6,195,615	-		QEN71_RS27840	0.50	-1.8
6,195,615	-		QEN71_RS27840	0.50	-3.0
6,195,615	-		QEN71_RS27840	0.50	-2.3
6,195,632	+		QEN71_RS27840	0.52	-2.7
6,195,632	+		QEN71_RS27840	0.52	-1.5
6,195,632	+		QEN71_RS27840	0.52	+0.1
6,195,633	-		QEN71_RS27840	0.53	-1.2
6,195,688	+		QEN71_RS27840	0.60	-2.5
6,195,688	+		QEN71_RS27840	0.60	-5.3
6,195,688	+		QEN71_RS27840	0.60	-4.1
6,195,689	-		QEN71_RS27840	0.60	-2.4
6,195,689	-		QEN71_RS27840	0.60	-3.1
6,195,689	-		QEN71_RS27840	0.60	-1.9
6,195,689	-		QEN71_RS27840	0.60	-2.3
6,195,709	+		QEN71_RS27840	0.63	-3.4
6,195,709	+		QEN71_RS27840	0.63	-5.0
6,195,709	+		QEN71_RS27840	0.63	-0.1
6,195,709	+		QEN71_RS27840	0.63	-3.5
6,195,710	-		QEN71_RS27840	0.63	-2.1
6,195,710	-		QEN71_RS27840	0.63	-1.6
6,195,710	-		QEN71_RS27840	0.63	-5.2
6,195,927	-				-2.1
6,195,945	+				-0.7
6,195,945	+				-2.0
6,195,945	+				-2.2
6,195,945	+				-0.9
6,195,945	+				-0.7
6,195,945	+				-1.2
6,195,945	+				+0.1
6,195,945	+				-3.8
6,195,946	-				-2.4
6,195,946	-				+0.1
6,195,946	-				-1.1
6,195,946	-				-2.8
6,195,989	+				-2.7
6,195,989	+				-0.5
6,195,989	+				-0.8
6,195,989	+				-1.2
6,195,989	+				-1.5
6,195,989	+				-4.7
6,195,989	+				-3.0
6,195,989	+				-2.2
6,195,989	+				-3.8
6,195,989	+				-2.5
6,195,989	+				-2.0
6,195,989	+				-0.2
6,195,989	+				-2.1
6,195,989	+				-0.5
6,195,989	+				+0.1
6,195,990	-				-2.7
6,195,990	-				-3.6
6,195,990	-				-1.8
6,195,990	-				-2.9
6,195,990	-				-1.3
6,195,990	-				-1.7
6,195,990	-				-0.2
6,195,990	-				-1.6
6,195,990	-				-4.0
6,195,990	-				-0.9
6,196,045	+				-0.5
6,196,046	-				-0.2
6,196,070	+				-1.3
6,196,070	+				-1.5
6,196,070	+				-1.1
6,196,071	-				-0.7
6,196,071	-				+0.5
6,196,075	+				+0.5
6,196,075	+				-2.5
6,196,075	+				+0.3
6,196,076	-				-0.6
6,196,076	-				-1.9
6,196,076	-				-0.8
6,196,076	-				+0.2
6,196,076	-				-0.5
6,196,076	-				+1.0
6,196,076	-				+0.8
6,196,076	-				+0.2
6,196,076	-				+1.2
6,196,076	-				+0.9
6,196,076	-				+0.9
6,196,078	+				-3.9
6,196,078	+				-1.3
6,196,078	+				-1.9
6,196,078	+				-0.9
6,196,078	+				-4.2
6,196,078	+				-1.1
6,196,078	+				-1.7
6,196,078	+				-1.8
6,196,078	+				-0.2
6,196,078	+				-3.5
6,196,078	+				-3.1
6,196,078	+				-3.1
6,196,078	+				-2.3
6,196,078	+				-1.8
6,196,078	+				-2.0
6,196,078	+				-0.7
6,196,078	+				-0.5
6,196,078	+				-3.2
6,196,078	+				+0.1
6,196,078	+				+0.1
6,196,078	+				-1.3
6,196,078	+				-2.3
6,196,079	-				+0.1
6,196,079	-				-1.3
6,196,079	-				+0.6
6,196,079	-				+0.8
6,196,079	-				-1.7
6,196,079	-				-0.2
6,196,079	-				-0.3
6,196,079	-				-0.1
6,196,079	-				-0.2
6,196,079	-				+0.2
6,196,079	-				-0.1
6,196,079	-				+2.1
6,196,079	-				+1.1
6,196,079	-				+0.3
6,196,079	-				-0.8
6,196,079	-				-0.3
6,196,079	-				+0.1
6,196,079	-				+0.4
6,196,079	-				+0.6
6,196,079	-				-0.9
6,196,079	-				+1.7
6,196,079	-				-1.1
6,196,079	-				+0.9
6,196,079	-				-0.2
6,196,079	-				+0.2
6,196,079	-				-1.0
6,196,079	-				-0.2