Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS27420 and QEN71_RS27425 overlap by 4 nucleotides QEN71_RS27425 and QEN71_RS27430 overlap by 4 nucleotides QEN71_RS27430 and QEN71_RS27435 overlap by 4 nucleotides
QEN71_RS27420: QEN71_RS27420 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase, at 6,111,110 to 6,112,648
_RS27420
QEN71_RS27425: QEN71_RS27425 - penicillin-binding protein 2, at 6,112,645 to 6,114,519
_RS27425
QEN71_RS27430: QEN71_RS27430 - cell division protein FtsL, at 6,114,516 to 6,114,866
_RS27430
QEN71_RS27435: QEN71_RS27435 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 6,114,863 to 6,115,804
_RS27435
Position (kb)
6112
6113
6114
6115 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 6112.651 kb on - strand at 6112.651 kb on - strand at 6112.655 kb on - strand at 6112.655 kb on - strand at 6112.655 kb on - strand at 6112.655 kb on - strand at 6112.840 kb on - strand, within QEN71_RS27425 at 6112.840 kb on - strand, within QEN71_RS27425 at 6112.992 kb on - strand, within QEN71_RS27425 at 6113.013 kb on - strand, within QEN71_RS27425 at 6113.013 kb on - strand, within QEN71_RS27425 at 6113.013 kb on - strand, within QEN71_RS27425 at 6113.218 kb on - strand, within QEN71_RS27425 at 6113.218 kb on - strand, within QEN71_RS27425 at 6113.218 kb on - strand, within QEN71_RS27425 at 6113.218 kb on - strand, within QEN71_RS27425 at 6113.218 kb on - strand, within QEN71_RS27425 at 6113.218 kb on - strand, within QEN71_RS27425 at 6113.220 kb on - strand, within QEN71_RS27425 at 6113.220 kb on - strand, within QEN71_RS27425 at 6113.259 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.376 kb on - strand, within QEN71_RS27425 at 6113.530 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.542 kb on - strand, within QEN71_RS27425 at 6113.617 kb on - strand, within QEN71_RS27425 at 6113.617 kb on - strand, within QEN71_RS27425 at 6113.617 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.679 kb on - strand, within QEN71_RS27425 at 6113.688 kb on - strand, within QEN71_RS27425 at 6113.796 kb on - strand, within QEN71_RS27425 at 6113.796 kb on - strand, within QEN71_RS27425 at 6113.796 kb on - strand, within QEN71_RS27425 at 6113.796 kb on - strand, within QEN71_RS27425 at 6113.796 kb on - strand, within QEN71_RS27425 at 6113.796 kb on - strand, within QEN71_RS27425 at 6113.796 kb on - strand, within QEN71_RS27425 at 6114.030 kb on - strand, within QEN71_RS27425 at 6114.030 kb on - strand, within QEN71_RS27425 at 6114.037 kb on - strand, within QEN71_RS27425 at 6114.045 kb on - strand, within QEN71_RS27425 at 6114.045 kb on - strand, within QEN71_RS27425 at 6114.045 kb on - strand, within QEN71_RS27425 at 6114.045 kb on - strand, within QEN71_RS27425
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 6,112,651 - -1.8 6,112,651 - -1.4 6,112,655 - -1.0 6,112,655 - +0.3 6,112,655 - +1.8 6,112,655 - +0.3 6,112,840 - QEN71_RS27425 0.10 -2.7 6,112,840 - QEN71_RS27425 0.10 -2.1 6,112,992 - QEN71_RS27425 0.19 +0.3 6,113,013 - QEN71_RS27425 0.20 -1.3 6,113,013 - QEN71_RS27425 0.20 -4.2 6,113,013 - QEN71_RS27425 0.20 -1.6 6,113,218 - QEN71_RS27425 0.31 -2.8 6,113,218 - QEN71_RS27425 0.31 -2.1 6,113,218 - QEN71_RS27425 0.31 -2.6 6,113,218 - QEN71_RS27425 0.31 -2.4 6,113,218 - QEN71_RS27425 0.31 -4.4 6,113,218 - QEN71_RS27425 0.31 -2.6 6,113,220 - QEN71_RS27425 0.31 -1.6 6,113,220 - QEN71_RS27425 0.31 -0.2 6,113,259 - QEN71_RS27425 0.33 +0.6 6,113,376 - QEN71_RS27425 0.39 -1.2 6,113,376 - QEN71_RS27425 0.39 -3.9 6,113,376 - QEN71_RS27425 0.39 -2.9 6,113,376 - QEN71_RS27425 0.39 -2.2 6,113,376 - QEN71_RS27425 0.39 -1.1 6,113,376 - QEN71_RS27425 0.39 -3.1 6,113,376 - QEN71_RS27425 0.39 -3.2 6,113,376 - QEN71_RS27425 0.39 -4.1 6,113,376 - QEN71_RS27425 0.39 -4.1 6,113,376 - QEN71_RS27425 0.39 -2.0 6,113,376 - QEN71_RS27425 0.39 -2.6 6,113,376 - QEN71_RS27425 0.39 -0.3 6,113,376 - QEN71_RS27425 0.39 +0.1 6,113,376 - QEN71_RS27425 0.39 -2.0 6,113,530 - QEN71_RS27425 0.47 -2.2 6,113,542 - QEN71_RS27425 0.48 -1.8 6,113,542 - QEN71_RS27425 0.48 +1.3 6,113,542 - QEN71_RS27425 0.48 -1.6 6,113,542 - QEN71_RS27425 0.48 -2.1 6,113,542 - QEN71_RS27425 0.48 -0.2 6,113,542 - QEN71_RS27425 0.48 +0.3 6,113,542 - QEN71_RS27425 0.48 +0.3 6,113,542 - QEN71_RS27425 0.48 -4.5 6,113,542 - QEN71_RS27425 0.48 -1.0 6,113,542 - QEN71_RS27425 0.48 -1.1 6,113,617 - QEN71_RS27425 0.52 -2.1 6,113,617 - QEN71_RS27425 0.52 -1.7 6,113,617 - QEN71_RS27425 0.52 -3.7 6,113,679 - QEN71_RS27425 0.55 -3.3 6,113,679 - QEN71_RS27425 0.55 -3.3 6,113,679 - QEN71_RS27425 0.55 -0.6 6,113,679 - QEN71_RS27425 0.55 -2.2 6,113,679 - QEN71_RS27425 0.55 -2.5 6,113,679 - QEN71_RS27425 0.55 -1.9 6,113,679 - QEN71_RS27425 0.55 -0.7 6,113,679 - QEN71_RS27425 0.55 -3.4 6,113,679 - QEN71_RS27425 0.55 -2.2 6,113,679 - QEN71_RS27425 0.55 -3.2 6,113,679 - QEN71_RS27425 0.55 -0.5 6,113,688 - QEN71_RS27425 0.56 -0.9 6,113,796 - QEN71_RS27425 0.61 +0.4 6,113,796 - QEN71_RS27425 0.61 -3.9 6,113,796 - QEN71_RS27425 0.61 -1.2 6,113,796 - QEN71_RS27425 0.61 -3.9 6,113,796 - QEN71_RS27425 0.61 -1.4 6,113,796 - QEN71_RS27425 0.61 +1.4 6,113,796 - QEN71_RS27425 0.61 -1.8 6,114,030 - QEN71_RS27425 0.74 +0.8 6,114,030 - QEN71_RS27425 0.74 -4.7 6,114,037 - QEN71_RS27425 0.74 -1.2 6,114,045 - QEN71_RS27425 0.75 -1.2 6,114,045 - QEN71_RS27425 0.75 +1.0 6,114,045 - QEN71_RS27425 0.75 -0.4 6,114,045 - QEN71_RS27425 0.75 -0.2
Or see this region's nucleotide sequence