Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26590 and QEN71_RS26595 are separated by 117 nucleotides QEN71_RS26595 and QEN71_RS26600 are separated by 14 nucleotides QEN71_RS26600 and QEN71_RS26605 are separated by 78 nucleotides
QEN71_RS26590: QEN71_RS26590 - glycolate oxidase subunit GlcF, at 5,936,232 to 5,937,458
_RS26590
QEN71_RS26595: QEN71_RS26595 - YggS family pyridoxal phosphate-dependent enzyme, at 5,937,576 to 5,938,274
_RS26595
QEN71_RS26600: QEN71_RS26600 - pyrroline-5-carboxylate reductase, at 5,938,289 to 5,939,104
_RS26600
QEN71_RS26605: QEN71_RS26605 - 4-hydroxybenzoate octaprenyltransferase, at 5,939,183 to 5,940,046
_RS26605
Position (kb) 5938
5939
5940 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 5937.303 kb on + strand, within QEN71_RS26590 at 5937.304 kb on - strand, within QEN71_RS26590 at 5937.304 kb on - strand, within QEN71_RS26590 at 5937.380 kb on + strand at 5937.380 kb on + strand at 5937.380 kb on + strand at 5937.380 kb on + strand at 5937.381 kb on - strand at 5937.381 kb on - strand at 5937.480 kb on + strand at 5937.481 kb on - strand at 5937.481 kb on - strand at 5937.481 kb on - strand at 5937.535 kb on + strand at 5937.535 kb on + strand at 5937.536 kb on - strand at 5937.536 kb on - strand at 5937.536 kb on - strand at 5937.536 kb on - strand at 5937.536 kb on - strand at 5937.536 kb on - strand at 5937.536 kb on - strand at 5937.537 kb on + strand at 5937.537 kb on + strand at 5937.537 kb on + strand at 5937.537 kb on + strand at 5937.538 kb on - strand at 5937.538 kb on - strand at 5937.538 kb on - strand at 5937.747 kb on + strand, within QEN71_RS26595 at 5937.747 kb on + strand, within QEN71_RS26595 at 5937.747 kb on + strand, within QEN71_RS26595 at 5937.747 kb on + strand, within QEN71_RS26595 at 5937.748 kb on - strand, within QEN71_RS26595 at 5937.748 kb on - strand, within QEN71_RS26595 at 5937.926 kb on + strand, within QEN71_RS26595 at 5937.927 kb on - strand, within QEN71_RS26595 at 5938.263 kb on + strand at 5938.264 kb on - strand at 5938.264 kb on - strand at 5938.264 kb on - strand at 5938.564 kb on + strand, within QEN71_RS26600 at 5938.564 kb on + strand, within QEN71_RS26600 at 5938.814 kb on + strand, within QEN71_RS26600 at 5938.814 kb on + strand, within QEN71_RS26600 at 5938.815 kb on - strand, within QEN71_RS26600 at 5938.815 kb on - strand, within QEN71_RS26600 at 5938.815 kb on - strand, within QEN71_RS26600 at 5938.823 kb on + strand, within QEN71_RS26600 at 5938.823 kb on + strand, within QEN71_RS26600 at 5938.823 kb on + strand, within QEN71_RS26600 at 5938.823 kb on + strand, within QEN71_RS26600 at 5938.824 kb on - strand, within QEN71_RS26600 at 5938.824 kb on - strand, within QEN71_RS26600 at 5938.824 kb on - strand, within QEN71_RS26600 at 5938.824 kb on - strand, within QEN71_RS26600 at 5938.824 kb on - strand, within QEN71_RS26600 at 5938.824 kb on - strand, within QEN71_RS26600 at 5938.824 kb on - strand, within QEN71_RS26600 at 5939.105 kb on + strand at 5939.202 kb on + strand at 5939.202 kb on + strand at 5939.202 kb on + strand at 5939.203 kb on - strand at 5939.203 kb on - strand at 5939.203 kb on - strand at 5940.025 kb on - strand at 5940.074 kb on - strand at 5940.074 kb on - strand at 5940.079 kb on - strand at 5940.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,937,303 + QEN71_RS26590 0.87 -0.3 5,937,304 - QEN71_RS26590 0.87 -1.4 5,937,304 - QEN71_RS26590 0.87 +0.0 5,937,380 + -1.2 5,937,380 + -0.0 5,937,380 + +0.1 5,937,380 + +0.1 5,937,381 - -1.1 5,937,381 - -0.3 5,937,480 + -0.3 5,937,481 - +0.6 5,937,481 - +0.3 5,937,481 - -0.9 5,937,535 + -0.5 5,937,535 + +0.1 5,937,536 - -1.1 5,937,536 - +0.3 5,937,536 - -0.4 5,937,536 - -0.2 5,937,536 - -0.4 5,937,536 - +0.6 5,937,536 - -0.3 5,937,537 + -0.9 5,937,537 + +0.3 5,937,537 + -1.2 5,937,537 + -2.3 5,937,538 - -2.4 5,937,538 - -2.5 5,937,538 - -2.0 5,937,747 + QEN71_RS26595 0.24 +0.1 5,937,747 + QEN71_RS26595 0.24 -0.8 5,937,747 + QEN71_RS26595 0.24 +0.1 5,937,747 + QEN71_RS26595 0.24 -0.8 5,937,748 - QEN71_RS26595 0.25 -0.7 5,937,748 - QEN71_RS26595 0.25 -1.9 5,937,926 + QEN71_RS26595 0.50 +0.5 5,937,927 - QEN71_RS26595 0.50 -1.0 5,938,263 + +0.0 5,938,264 - -0.4 5,938,264 - -1.3 5,938,264 - +1.6 5,938,564 + QEN71_RS26600 0.34 -2.3 5,938,564 + QEN71_RS26600 0.34 -1.7 5,938,814 + QEN71_RS26600 0.64 -4.3 5,938,814 + QEN71_RS26600 0.64 -2.4 5,938,815 - QEN71_RS26600 0.64 -3.7 5,938,815 - QEN71_RS26600 0.64 -1.5 5,938,815 - QEN71_RS26600 0.64 -1.9 5,938,823 + QEN71_RS26600 0.65 -3.9 5,938,823 + QEN71_RS26600 0.65 -2.9 5,938,823 + QEN71_RS26600 0.65 -5.5 5,938,823 + QEN71_RS26600 0.65 -4.5 5,938,824 - QEN71_RS26600 0.66 -0.7 5,938,824 - QEN71_RS26600 0.66 -2.7 5,938,824 - QEN71_RS26600 0.66 -4.3 5,938,824 - QEN71_RS26600 0.66 -2.1 5,938,824 - QEN71_RS26600 0.66 -1.2 5,938,824 - QEN71_RS26600 0.66 -4.5 5,938,824 - QEN71_RS26600 0.66 -1.8 5,939,105 + +0.5 5,939,202 + -0.7 5,939,202 + +1.4 5,939,202 + -1.6 5,939,203 - -0.7 5,939,203 - -1.4 5,939,203 - -0.6 5,940,025 - +0.4 5,940,074 - +0.1 5,940,074 - -0.2 5,940,079 - -0.3 5,940,079 - -0.2
Or see this region's nucleotide sequence