Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS26545

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
5,920,054	-		QEN71_RS26540	0.71	-1.7
5,920,054	-		QEN71_RS26540	0.71	-1.7
5,920,158	+		QEN71_RS26540	0.75	-0.5
5,920,158	+		QEN71_RS26540	0.75	-0.9
5,920,159	-		QEN71_RS26540	0.75	-0.1
5,920,185	+		QEN71_RS26540	0.76	+2.8
5,920,185	+		QEN71_RS26540	0.76	-0.5
5,920,192	-		QEN71_RS26540	0.76	-0.3
5,920,272	+		QEN71_RS26540	0.79	-0.1
5,920,272	+		QEN71_RS26540	0.79	+0.8
5,920,272	+		QEN71_RS26540	0.79	-0.5
5,920,272	+		QEN71_RS26540	0.79	+0.5
5,920,273	-		QEN71_RS26540	0.79	-0.3
5,920,273	-		QEN71_RS26540	0.79	+0.3
5,920,273	-		QEN71_RS26540	0.79	+1.3
5,920,389	+		QEN71_RS26540	0.83	-1.1
5,920,390	-		QEN71_RS26540	0.83	+0.0
5,920,390	-		QEN71_RS26540	0.83	+0.5
5,920,390	-		QEN71_RS26540	0.83	-0.2
5,920,744	+				-0.7
5,920,745	-				-0.8
5,920,813	-				-0.6
5,920,827	+				+1.1
5,920,828	-				+0.2
5,920,836	+				+0.1
5,920,836	+				+1.0
5,920,836	+				+1.1
5,920,836	+				+0.2
5,920,837	-				-0.4
5,920,837	-				-0.5
5,920,837	-				-0.5
5,920,837	-				+1.4
5,920,837	-				-0.7
5,920,976	+				-0.5
5,920,976	+				-0.5
5,920,976	+				+0.7
5,920,976	+				+0.5
5,920,976	+				-0.2
5,920,976	+				+0.8
5,920,976	+				-0.0
5,920,977	-				+0.5
5,920,977	-				+0.0
5,920,977	-				+1.0
5,920,977	-				+0.9
5,920,977	-				-1.1
5,921,003	+				+1.8
5,921,003	+				+1.9
5,921,003	+				+0.2
5,921,004	-				-0.6
5,921,004	-				-0.5
5,921,016	+				-0.4
5,921,017	-				-1.4
5,921,029	+				-2.5
5,921,029	+				-0.1
5,921,029	+				-0.7
5,921,029	+				+0.3
5,921,029	+				+0.3
5,921,030	-				-2.8
5,921,030	-				-3.1
5,921,030	-				-1.4
5,921,030	-				-2.8
5,921,030	-				-0.5
5,921,030	-				-1.8
5,921,030	-				-0.7
5,921,030	-				-3.2
5,921,030	-				-2.7
5,921,034	+				+0.8
5,921,034	+				-0.6
5,921,034	+				-0.6
5,921,034	+				+1.6
5,921,034	+				+0.7
5,921,034	+				-1.0
5,921,035	-				-0.9
5,921,035	-				-1.6
5,921,035	-				+0.6
5,921,035	-				-1.5
5,921,035	-				-1.5
5,921,035	-				-2.0
5,921,035	-				-0.4
5,921,109	+				-1.2
5,921,177	+				-2.1
5,921,177	+				-1.5
5,921,177	+				-1.1
5,921,177	+				-0.4
5,921,177	+				-2.4
5,921,178	-				-1.3
5,921,178	-				-2.1
5,921,200	-				-3.3
5,921,213	+				-3.0
5,921,213	+				-1.2
5,921,213	+				-3.5
5,921,213	+				-2.8
5,921,213	+				-2.6
5,921,213	+				-0.9
5,921,214	-				-2.0
5,921,214	-				-2.8
5,921,214	-				+0.5
5,921,687	+		QEN71_RS26545	0.15	-0.9
5,921,687	+		QEN71_RS26545	0.15	-0.7
5,921,688	-		QEN71_RS26545	0.15	-1.3
5,921,770	+		QEN71_RS26545	0.17	-1.3
5,921,770	+		QEN71_RS26545	0.17	-1.9
5,921,770	+		QEN71_RS26545	0.17	-1.8
5,921,771	-		QEN71_RS26545	0.17	+0.3
5,921,819	+		QEN71_RS26545	0.18	-3.2
5,921,820	-		QEN71_RS26545	0.18	-0.2
5,921,820	-		QEN71_RS26545	0.18	-1.6
5,921,820	-		QEN71_RS26545	0.18	+0.1
5,921,861	+		QEN71_RS26545	0.19	-1.0
5,921,861	+		QEN71_RS26545	0.19	-1.5
5,921,861	+		QEN71_RS26545	0.19	-1.9
5,921,861	+		QEN71_RS26545	0.19	+1.1
5,921,861	+		QEN71_RS26545	0.19	-2.6
5,921,861	+		QEN71_RS26545	0.19	-2.1
5,921,861	+		QEN71_RS26545	0.19	+0.5
5,921,861	+		QEN71_RS26545	0.19	-3.6
5,921,862	-		QEN71_RS26545	0.19	-0.7
5,921,862	-		QEN71_RS26545	0.19	+0.1
5,921,862	-		QEN71_RS26545	0.19	-0.2
5,921,862	-		QEN71_RS26545	0.19	-2.5
5,921,862	-		QEN71_RS26545	0.19	-0.6
5,921,862	-		QEN71_RS26545	0.19	-2.2
5,921,862	-		QEN71_RS26545	0.19	+0.0
5,921,885	+		QEN71_RS26545	0.20	+0.1
5,921,885	+		QEN71_RS26545	0.20	-2.2
5,921,886	-		QEN71_RS26545	0.20	-2.7
5,921,886	-		QEN71_RS26545	0.20	-1.8
5,922,320	+		QEN71_RS26545	0.30	-0.2
5,922,320	+		QEN71_RS26545	0.30	+1.2
5,922,320	+		QEN71_RS26545	0.30	-2.7
5,922,321	-		QEN71_RS26545	0.30	-3.8
5,922,321	-		QEN71_RS26545	0.30	-1.2
5,922,720	+		QEN71_RS26545	0.39	-4.2
5,922,720	+		QEN71_RS26545	0.39	-2.8
5,922,720	+		QEN71_RS26545	0.39	-3.0
5,922,758	+		QEN71_RS26545	0.40	+1.1
5,922,758	+		QEN71_RS26545	0.40	-0.6
5,922,759	-		QEN71_RS26545	0.40	-1.4
5,922,839	+		QEN71_RS26545	0.42	-0.9
5,922,839	+		QEN71_RS26545	0.42	-2.0
5,922,840	-		QEN71_RS26545	0.42	-1.2
5,922,840	-		QEN71_RS26545	0.42	-0.2
5,922,875	+		QEN71_RS26545	0.43	-0.9
5,922,875	+		QEN71_RS26545	0.43	+0.1
5,922,875	+		QEN71_RS26545	0.43	+0.2
5,922,875	+		QEN71_RS26545	0.43	-2.4
5,922,875	+		QEN71_RS26545	0.43	-3.0
5,922,875	+		QEN71_RS26545	0.43	-0.8
5,922,875	+		QEN71_RS26545	0.43	-0.6
5,922,875	+		QEN71_RS26545	0.43	-2.6
5,922,875	+		QEN71_RS26545	0.43	-1.2
5,922,875	+		QEN71_RS26545	0.43	-0.1
5,922,876	-		QEN71_RS26545	0.43	-0.7
5,922,876	-		QEN71_RS26545	0.43	-3.0
5,922,876	-		QEN71_RS26545	0.43	-0.8
5,922,876	-		QEN71_RS26545	0.43	-2.3
5,922,876	-		QEN71_RS26545	0.43	-0.5
5,922,876	-		QEN71_RS26545	0.43	-3.7
5,923,145	+		QEN71_RS26545	0.49	-1.7
5,923,145	+		QEN71_RS26545	0.49	-1.1
5,923,145	+		QEN71_RS26545	0.49	-0.7
5,923,145	+		QEN71_RS26545	0.49	-2.7
5,923,146	-		QEN71_RS26545	0.49	-0.7
5,923,146	-		QEN71_RS26545	0.49	-3.5
5,923,146	-		QEN71_RS26545	0.49	-2.4
5,923,259	+		QEN71_RS26545	0.52	-0.6
5,923,259	+		QEN71_RS26545	0.52	-0.9
5,923,259	+		QEN71_RS26545	0.52	-1.1
5,923,259	+		QEN71_RS26545	0.52	-2.4
5,923,259	+		QEN71_RS26545	0.52	+0.1
5,923,259	+		QEN71_RS26545	0.52	-1.5
5,923,259	+		QEN71_RS26545	0.52	-1.7
5,923,259	+		QEN71_RS26545	0.52	-1.2
5,923,260	-		QEN71_RS26545	0.52	-0.9
5,923,260	-		QEN71_RS26545	0.52	-2.0
5,923,260	-		QEN71_RS26545	0.52	-1.2
5,923,260	-		QEN71_RS26545	0.52	-1.2
5,923,260	-		QEN71_RS26545	0.52	-3.7
5,923,260	-		QEN71_RS26545	0.52	-1.5
5,923,504	+		QEN71_RS26545	0.58	-0.9
5,923,504	+		QEN71_RS26545	0.58	-2.8
5,923,504	+		QEN71_RS26545	0.58	-0.3
5,923,504	+		QEN71_RS26545	0.58	-1.5
5,923,505	-		QEN71_RS26545	0.58	-1.4
5,923,505	-		QEN71_RS26545	0.58	-0.6
5,923,505	-		QEN71_RS26545	0.58	+0.1
5,923,505	-		QEN71_RS26545	0.58	-1.1
5,923,505	-		QEN71_RS26545	0.58	-1.1
5,923,505	-		QEN71_RS26545	0.58	-1.8
5,923,505	-		QEN71_RS26545	0.58	-2.3
5,923,551	+		QEN71_RS26545	0.59	-1.2
5,923,551	+		QEN71_RS26545	0.59	-0.5
5,923,551	+		QEN71_RS26545	0.59	-1.9
5,923,551	+		QEN71_RS26545	0.59	-2.4
5,923,551	+		QEN71_RS26545	0.59	-2.2
5,923,552	-		QEN71_RS26545	0.59	-1.2
5,923,552	-		QEN71_RS26545	0.59	-2.6
5,923,552	-		QEN71_RS26545	0.59	-0.2
5,923,552	-		QEN71_RS26545	0.59	+0.5
5,923,552	-		QEN71_RS26545	0.59	-2.6
5,923,552	-		QEN71_RS26545	0.59	-1.5
5,923,586	+		QEN71_RS26545	0.60	-1.8
5,923,586	+		QEN71_RS26545	0.60	-2.3
5,923,587	-		QEN71_RS26545	0.60	+0.1
5,923,691	+		QEN71_RS26545	0.62	-0.2
5,923,691	+		QEN71_RS26545	0.62	-1.9
5,923,692	-		QEN71_RS26545	0.62	-2.2
5,923,692	-		QEN71_RS26545	0.62	-2.2
5,923,692	-		QEN71_RS26545	0.62	-1.7
5,923,692	-		QEN71_RS26545	0.62	-0.6
5,923,873	+		QEN71_RS26545	0.67	-2.9
5,923,873	+		QEN71_RS26545	0.67	-2.7
5,923,873	+		QEN71_RS26545	0.67	-2.1
5,923,874	-		QEN71_RS26545	0.67	-2.2
5,923,925	+		QEN71_RS26545	0.68	+0.0
5,923,925	+		QEN71_RS26545	0.68	-3.0
5,923,925	+		QEN71_RS26545	0.68	-0.4
5,923,925	+		QEN71_RS26545	0.68	-0.2
5,923,925	+		QEN71_RS26545	0.68	-3.2
5,923,925	+		QEN71_RS26545	0.68	-3.7
5,923,925	+		QEN71_RS26545	0.68	+0.1
5,923,925	+		QEN71_RS26545	0.68	-1.9
5,923,925	+		QEN71_RS26545	0.68	-2.1
5,923,925	+		QEN71_RS26545	0.68	+0.4
5,923,926	-		QEN71_RS26545	0.68	-2.0
5,923,926	-		QEN71_RS26545	0.68	-1.5
5,923,926	-		QEN71_RS26545	0.68	-0.7
5,923,926	-		QEN71_RS26545	0.68	-0.2
5,923,926	-		QEN71_RS26545	0.68	-1.6
5,923,926	-		QEN71_RS26545	0.68	-1.1
5,923,926	-		QEN71_RS26545	0.68	-1.5
5,923,926	-		QEN71_RS26545	0.68	-1.6
5,923,926	-		QEN71_RS26545	0.68	-1.9
5,923,926	-		QEN71_RS26545	0.68	-1.9
5,923,926	-		QEN71_RS26545	0.68	-1.1
5,923,926	-		QEN71_RS26545	0.68	-2.2
5,924,479	+		QEN71_RS26545	0.81	-0.2
5,924,480	-		QEN71_RS26545	0.81	-1.6
5,924,480	-		QEN71_RS26545	0.81	-2.6
5,924,480	-		QEN71_RS26545	0.81	-0.5
5,924,480	-		QEN71_RS26545	0.81	-0.4
5,924,581	+		QEN71_RS26545	0.83	+0.2
5,924,581	+		QEN71_RS26545	0.83	-1.9
5,924,582	-		QEN71_RS26545	0.83	-2.2
5,924,582	-		QEN71_RS26545	0.83	-0.2
5,924,582	-		QEN71_RS26545	0.83	+1.1
5,924,582	-		QEN71_RS26545	0.83	-3.7
5,924,582	-		QEN71_RS26545	0.83	-2.0
5,924,585	+		QEN71_RS26545	0.83	-1.2
5,924,585	+		QEN71_RS26545	0.83	+1.8
5,924,585	+		QEN71_RS26545	0.83	-3.0
5,924,585	+		QEN71_RS26545	0.83	-0.5
5,924,585	+		QEN71_RS26545	0.83	-2.4
5,924,586	-		QEN71_RS26545	0.83	-2.1
5,924,586	-		QEN71_RS26545	0.83	+0.2
5,924,586	-		QEN71_RS26545	0.83	-0.0
5,924,586	-		QEN71_RS26545	0.83	-0.7
5,924,586	-		QEN71_RS26545	0.83	-1.8
5,924,873	+				-2.8
5,924,874	-				+0.0
5,924,874	-				-1.8
5,924,928	+				-1.3
5,924,928	+				-0.8
5,924,928	+				-1.0
5,924,929	-				-1.4
5,924,929	-				-1.8
5,924,929	-				-0.8
5,924,929	-				-2.9
5,925,058	+				-2.9
5,925,058	+				+0.7
5,925,058	+				-1.9
5,925,058	+				-2.5
5,925,058	+				-2.4
5,925,059	-				-1.7
5,925,059	-				-2.1
5,925,059	-				-1.8
5,925,059	-				-2.9
5,925,059	-				+1.5
5,925,059	-				-1.2
5,925,059	-				-1.0
5,925,188	+				-1.6
5,925,242	-				-1.5
5,925,242	-				-0.7
5,925,242	-				+1.4
5,925,247	+				-1.1
5,925,247	+				-1.1
5,925,247	+				+0.3
5,925,248	-				-1.6
5,925,248	-				-0.8
5,925,248	-				-1.6
5,925,250	+				-0.9
5,925,250	+				-1.5
5,925,250	+				+1.4
5,925,250	+				+0.3
5,925,250	+				-0.1
5,925,250	+				+0.4
5,925,251	-				-0.8
5,925,251	-				+0.4
5,925,251	-				-1.0
5,925,251	-				-0.0
5,925,251	-				-0.1
5,925,251	-				-2.4
5,925,251	-				+0.8
5,925,251	-				-0.4
5,925,251	-				-1.3
5,925,251	-				-0.3
5,925,402	+				-1.2
5,925,402	+				-0.3
5,925,402	+				-0.9
5,925,402	+				+0.5
5,925,402	+				-0.5
5,925,402	+				-0.8
5,925,402	+				+0.8
5,925,402	+				+0.7
5,925,402	+				-0.7
5,925,403	-				-0.1
5,925,403	-				-0.7
5,925,403	-				-1.7
5,925,442	+				+1.0
5,925,442	+				-0.8
5,925,442	+				-0.3
5,925,443	-				+0.0
5,925,443	-				-1.3
5,925,443	-				-0.7
5,925,443	-				-0.6
5,925,443	-				-0.6
5,925,574	+		QEN71_RS26550	0.20	+0.4
5,925,574	+		QEN71_RS26550	0.20	-1.2
5,925,574	+		QEN71_RS26550	0.20	+0.7
5,925,574	+		QEN71_RS26550	0.20	+0.4
5,925,574	+		QEN71_RS26550	0.20	+0.8
5,925,574	+		QEN71_RS26550	0.20	-1.1
5,925,575	-		QEN71_RS26550	0.20	-0.9
5,925,575	-		QEN71_RS26550	0.20	+0.1
5,925,575	-		QEN71_RS26550	0.20	-0.7
5,925,575	-		QEN71_RS26550	0.20	-1.1
5,925,629	-		QEN71_RS26550	0.27	-1.8
5,925,629	-		QEN71_RS26550	0.27	+1.0
5,925,629	-		QEN71_RS26550	0.27	-0.2
5,925,678	+		QEN71_RS26550	0.32	-0.6
5,925,678	+		QEN71_RS26550	0.32	-1.4
5,925,678	+		QEN71_RS26550	0.32	+1.1
5,925,678	+		QEN71_RS26550	0.32	-1.0
5,925,678	+		QEN71_RS26550	0.32	-1.0
5,925,678	+		QEN71_RS26550	0.32	-1.2
5,925,678	+		QEN71_RS26550	0.32	-0.4
5,925,678	+		QEN71_RS26550	0.32	-1.3
5,925,678	+		QEN71_RS26550	0.32	+1.4
5,925,679	-		QEN71_RS26550	0.33	-1.1
5,925,679	-		QEN71_RS26550	0.33	+0.3
5,925,679	-		QEN71_RS26550	0.33	-2.1
5,925,756	-		QEN71_RS26550	0.42	-0.4
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5,926,286	-				-1.2