Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26440 and QEN71_RS26445 are separated by 648 nucleotides QEN71_RS26445 and QEN71_RS26450 are separated by 97 nucleotides
QEN71_RS26440: QEN71_RS26440 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 5,895,949 to 5,896,902
_RS26440
QEN71_RS26445: QEN71_RS26445 - phosphoribosylformylglycinamidine cyclo-ligase, at 5,897,551 to 5,898,618
_RS26445
QEN71_RS26450: QEN71_RS26450 - AI-2E family transporter, at 5,898,716 to 5,899,792
_RS26450
Position (kb) 5897
5898
5899 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5896.900 kb on + strand at 5896.972 kb on + strand at 5896.972 kb on + strand at 5897.004 kb on - strand at 5897.030 kb on + strand at 5897.030 kb on + strand at 5897.030 kb on + strand at 5897.030 kb on + strand at 5897.030 kb on + strand at 5897.047 kb on + strand at 5897.047 kb on + strand at 5897.047 kb on + strand at 5897.100 kb on + strand at 5897.100 kb on + strand at 5897.100 kb on + strand at 5897.152 kb on + strand at 5897.152 kb on + strand at 5897.152 kb on + strand at 5897.152 kb on + strand at 5897.152 kb on + strand at 5897.153 kb on - strand at 5897.153 kb on - strand at 5897.153 kb on - strand at 5897.153 kb on - strand at 5897.153 kb on - strand at 5897.160 kb on - strand at 5897.160 kb on - strand at 5897.263 kb on - strand at 5897.316 kb on - strand at 5897.338 kb on - strand at 5897.422 kb on + strand at 5897.599 kb on - strand at 5897.673 kb on + strand, within QEN71_RS26445 at 5897.674 kb on - strand, within QEN71_RS26445 at 5897.823 kb on + strand, within QEN71_RS26445 at 5897.823 kb on + strand, within QEN71_RS26445 at 5897.824 kb on - strand, within QEN71_RS26445 at 5897.850 kb on + strand, within QEN71_RS26445 at 5897.850 kb on + strand, within QEN71_RS26445 at 5897.851 kb on - strand, within QEN71_RS26445 at 5897.851 kb on - strand, within QEN71_RS26445 at 5897.851 kb on - strand, within QEN71_RS26445 at 5897.906 kb on + strand, within QEN71_RS26445 at 5897.906 kb on + strand, within QEN71_RS26445 at 5897.906 kb on + strand, within QEN71_RS26445 at 5897.907 kb on - strand, within QEN71_RS26445 at 5897.910 kb on + strand, within QEN71_RS26445 at 5897.911 kb on - strand, within QEN71_RS26445 at 5897.911 kb on - strand, within QEN71_RS26445 at 5898.129 kb on - strand, within QEN71_RS26445 at 5898.143 kb on + strand, within QEN71_RS26445 at 5898.144 kb on - strand, within QEN71_RS26445 at 5898.144 kb on - strand, within QEN71_RS26445 at 5898.267 kb on - strand, within QEN71_RS26445 at 5898.267 kb on - strand, within QEN71_RS26445 at 5898.267 kb on - strand, within QEN71_RS26445 at 5898.425 kb on + strand, within QEN71_RS26445 at 5898.425 kb on + strand, within QEN71_RS26445 at 5898.425 kb on + strand, within QEN71_RS26445 at 5898.425 kb on + strand, within QEN71_RS26445 at 5898.425 kb on + strand, within QEN71_RS26445 at 5898.426 kb on - strand, within QEN71_RS26445 at 5898.426 kb on - strand, within QEN71_RS26445 at 5898.426 kb on - strand, within QEN71_RS26445 at 5898.564 kb on - strand at 5898.641 kb on + strand at 5898.641 kb on + strand at 5898.642 kb on - strand at 5898.642 kb on - strand at 5898.642 kb on - strand at 5898.746 kb on + strand at 5898.763 kb on + strand at 5898.807 kb on + strand at 5898.807 kb on + strand at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.854 kb on + strand, within QEN71_RS26450 at 5898.856 kb on + strand, within QEN71_RS26450 at 5898.856 kb on + strand, within QEN71_RS26450 at 5898.856 kb on + strand, within QEN71_RS26450 at 5899.065 kb on + strand, within QEN71_RS26450 at 5899.065 kb on + strand, within QEN71_RS26450 at 5899.065 kb on + strand, within QEN71_RS26450 at 5899.099 kb on + strand, within QEN71_RS26450 at 5899.154 kb on + strand, within QEN71_RS26450 at 5899.154 kb on + strand, within QEN71_RS26450 at 5899.154 kb on + strand, within QEN71_RS26450 at 5899.238 kb on + strand, within QEN71_RS26450 at 5899.238 kb on + strand, within QEN71_RS26450 at 5899.238 kb on + strand, within QEN71_RS26450 at 5899.238 kb on + strand, within QEN71_RS26450 at 5899.238 kb on + strand, within QEN71_RS26450 at 5899.238 kb on + strand, within QEN71_RS26450 at 5899.238 kb on + strand, within QEN71_RS26450 at 5899.352 kb on + strand, within QEN71_RS26450 at 5899.352 kb on + strand, within QEN71_RS26450 at 5899.352 kb on + strand, within QEN71_RS26450 at 5899.397 kb on + strand, within QEN71_RS26450 at 5899.397 kb on + strand, within QEN71_RS26450 at 5899.397 kb on + strand, within QEN71_RS26450 at 5899.397 kb on + strand, within QEN71_RS26450 at 5899.397 kb on + strand, within QEN71_RS26450 at 5899.397 kb on + strand, within QEN71_RS26450 at 5899.411 kb on + strand, within QEN71_RS26450 at 5899.412 kb on + strand, within QEN71_RS26450 at 5899.412 kb on + strand, within QEN71_RS26450 at 5899.414 kb on + strand, within QEN71_RS26450 at 5899.453 kb on + strand, within QEN71_RS26450 at 5899.478 kb on + strand, within QEN71_RS26450 at 5899.478 kb on + strand, within QEN71_RS26450 at 5899.478 kb on + strand, within QEN71_RS26450 at 5899.480 kb on + strand, within QEN71_RS26450 at 5899.571 kb on + strand, within QEN71_RS26450 at 5899.571 kb on + strand, within QEN71_RS26450 at 5899.587 kb on + strand, within QEN71_RS26450
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,896,900 + -1.0 5,896,972 + -0.5 5,896,972 + -0.3 5,897,004 - -0.2 5,897,030 + -0.0 5,897,030 + +0.6 5,897,030 + +0.3 5,897,030 + +0.3 5,897,030 + -0.3 5,897,047 + -0.4 5,897,047 + -0.2 5,897,047 + +0.9 5,897,100 + +0.3 5,897,100 + -0.2 5,897,100 + -0.5 5,897,152 + +0.8 5,897,152 + -0.1 5,897,152 + -0.8 5,897,152 + -1.9 5,897,152 + -0.2 5,897,153 - -0.5 5,897,153 - -0.5 5,897,153 - +0.8 5,897,153 - -0.2 5,897,153 - +0.1 5,897,160 - -0.1 5,897,160 - +1.0 5,897,263 - +0.9 5,897,316 - -0.7 5,897,338 - -0.2 5,897,422 + +0.2 5,897,599 - -3.3 5,897,673 + QEN71_RS26445 0.11 +0.1 5,897,674 - QEN71_RS26445 0.12 -0.7 5,897,823 + QEN71_RS26445 0.25 -1.6 5,897,823 + QEN71_RS26445 0.25 -4.3 5,897,824 - QEN71_RS26445 0.26 -3.1 5,897,850 + QEN71_RS26445 0.28 -2.9 5,897,850 + QEN71_RS26445 0.28 -4.0 5,897,851 - QEN71_RS26445 0.28 -2.6 5,897,851 - QEN71_RS26445 0.28 -5.0 5,897,851 - QEN71_RS26445 0.28 -2.3 5,897,906 + QEN71_RS26445 0.33 -4.6 5,897,906 + QEN71_RS26445 0.33 -0.2 5,897,906 + QEN71_RS26445 0.33 -4.5 5,897,907 - QEN71_RS26445 0.33 -5.3 5,897,910 + QEN71_RS26445 0.34 -2.9 5,897,911 - QEN71_RS26445 0.34 -4.8 5,897,911 - QEN71_RS26445 0.34 -3.7 5,898,129 - QEN71_RS26445 0.54 -2.8 5,898,143 + QEN71_RS26445 0.55 -2.3 5,898,144 - QEN71_RS26445 0.56 -4.2 5,898,144 - QEN71_RS26445 0.56 -2.7 5,898,267 - QEN71_RS26445 0.67 -3.6 5,898,267 - QEN71_RS26445 0.67 -3.8 5,898,267 - QEN71_RS26445 0.67 -1.9 5,898,425 + QEN71_RS26445 0.82 -4.2 5,898,425 + QEN71_RS26445 0.82 -0.7 5,898,425 + QEN71_RS26445 0.82 -0.7 5,898,425 + QEN71_RS26445 0.82 -2.8 5,898,425 + QEN71_RS26445 0.82 -3.3 5,898,426 - QEN71_RS26445 0.82 -2.9 5,898,426 - QEN71_RS26445 0.82 -3.2 5,898,426 - QEN71_RS26445 0.82 -4.7 5,898,564 - -3.6 5,898,641 + -2.0 5,898,641 + -2.6 5,898,642 - -1.5 5,898,642 - -1.2 5,898,642 - -1.1 5,898,746 + -2.4 5,898,763 + -0.2 5,898,807 + -2.5 5,898,807 + +0.8 5,898,854 + QEN71_RS26450 0.13 +0.3 5,898,854 + QEN71_RS26450 0.13 +1.1 5,898,854 + QEN71_RS26450 0.13 -0.1 5,898,854 + QEN71_RS26450 0.13 -0.3 5,898,854 + QEN71_RS26450 0.13 -0.2 5,898,854 + QEN71_RS26450 0.13 +0.5 5,898,854 + QEN71_RS26450 0.13 -0.6 5,898,854 + QEN71_RS26450 0.13 -0.5 5,898,854 + QEN71_RS26450 0.13 -0.0 5,898,854 + QEN71_RS26450 0.13 -0.9 5,898,854 + QEN71_RS26450 0.13 -1.4 5,898,854 + QEN71_RS26450 0.13 -0.1 5,898,856 + QEN71_RS26450 0.13 -0.2 5,898,856 + QEN71_RS26450 0.13 -1.9 5,898,856 + QEN71_RS26450 0.13 +1.2 5,899,065 + QEN71_RS26450 0.32 +0.8 5,899,065 + QEN71_RS26450 0.32 -0.6 5,899,065 + QEN71_RS26450 0.32 +0.3 5,899,099 + QEN71_RS26450 0.36 +0.3 5,899,154 + QEN71_RS26450 0.41 +1.2 5,899,154 + QEN71_RS26450 0.41 -0.5 5,899,154 + QEN71_RS26450 0.41 +0.3 5,899,238 + QEN71_RS26450 0.48 -0.2 5,899,238 + QEN71_RS26450 0.48 -1.5 5,899,238 + QEN71_RS26450 0.48 +1.1 5,899,238 + QEN71_RS26450 0.48 +0.1 5,899,238 + QEN71_RS26450 0.48 +0.4 5,899,238 + QEN71_RS26450 0.48 +0.4 5,899,238 + QEN71_RS26450 0.48 +1.7 5,899,352 + QEN71_RS26450 0.59 +0.1 5,899,352 + QEN71_RS26450 0.59 +0.6 5,899,352 + QEN71_RS26450 0.59 -0.1 5,899,397 + QEN71_RS26450 0.63 +2.0 5,899,397 + QEN71_RS26450 0.63 +0.1 5,899,397 + QEN71_RS26450 0.63 +0.8 5,899,397 + QEN71_RS26450 0.63 +0.4 5,899,397 + QEN71_RS26450 0.63 +0.4 5,899,397 + QEN71_RS26450 0.63 +0.8 5,899,411 + QEN71_RS26450 0.65 +0.7 5,899,412 + QEN71_RS26450 0.65 -0.7 5,899,412 + QEN71_RS26450 0.65 -0.5 5,899,414 + QEN71_RS26450 0.65 -0.4 5,899,453 + QEN71_RS26450 0.68 +0.3 5,899,478 + QEN71_RS26450 0.71 -0.6 5,899,478 + QEN71_RS26450 0.71 +1.6 5,899,478 + QEN71_RS26450 0.71 -1.3 5,899,480 + QEN71_RS26450 0.71 +0.4 5,899,571 + QEN71_RS26450 0.79 +0.8 5,899,571 + QEN71_RS26450 0.79 +1.0 5,899,587 + QEN71_RS26450 0.81 +1.0
Or see this region's nucleotide sequence