Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26185 and QEN71_RS26190 are separated by 394 nucleotides QEN71_RS26190 and QEN71_RS26195 are separated by 120 nucleotides QEN71_RS26195 and QEN71_RS26200 are separated by 45 nucleotides
QEN71_RS26185: QEN71_RS26185 - peroxiredoxin, at 5,841,135 to 5,841,773
_RS26185
QEN71_RS26190: QEN71_RS26190 - DUF883 family protein, at 5,842,168 to 5,842,470
_RS26190
QEN71_RS26195: QEN71_RS26195 - phage holin family protein, at 5,842,591 to 5,842,974
_RS26195
QEN71_RS26200: QEN71_RS26200 - DUF3318 domain-containing protein, at 5,843,020 to 5,843,505
_RS26200
Position (kb) 5842
5843 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5841.184 kb on + strand at 5841.184 kb on + strand at 5841.184 kb on + strand at 5841.184 kb on + strand at 5841.184 kb on + strand at 5841.184 kb on + strand at 5841.184 kb on + strand at 5841.185 kb on - strand at 5841.185 kb on - strand at 5841.185 kb on - strand at 5841.185 kb on - strand at 5841.185 kb on - strand at 5841.185 kb on - strand at 5841.185 kb on - strand at 5841.185 kb on - strand at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.286 kb on + strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.287 kb on - strand, within QEN71_RS26185 at 5841.358 kb on + strand, within QEN71_RS26185 at 5841.358 kb on + strand, within QEN71_RS26185 at 5841.359 kb on - strand, within QEN71_RS26185 at 5841.451 kb on + strand, within QEN71_RS26185 at 5841.451 kb on + strand, within QEN71_RS26185 at 5841.451 kb on + strand, within QEN71_RS26185 at 5841.452 kb on - strand, within QEN71_RS26185 at 5841.452 kb on - strand, within QEN71_RS26185 at 5841.452 kb on - strand, within QEN71_RS26185 at 5841.543 kb on - strand, within QEN71_RS26185 at 5841.587 kb on + strand, within QEN71_RS26185 at 5841.587 kb on + strand, within QEN71_RS26185 at 5841.587 kb on + strand, within QEN71_RS26185 at 5841.587 kb on + strand, within QEN71_RS26185 at 5841.588 kb on - strand, within QEN71_RS26185 at 5841.588 kb on - strand, within QEN71_RS26185 at 5841.765 kb on + strand at 5841.765 kb on + strand at 5841.765 kb on + strand at 5841.765 kb on + strand at 5841.765 kb on + strand at 5841.765 kb on + strand at 5841.765 kb on + strand at 5841.765 kb on + strand at 5841.766 kb on - strand at 5841.766 kb on - strand at 5841.773 kb on + strand at 5841.773 kb on + strand at 5841.773 kb on + strand at 5841.773 kb on + strand at 5841.773 kb on + strand at 5841.773 kb on + strand at 5841.774 kb on - strand at 5841.774 kb on - strand at 5841.774 kb on - strand at 5841.774 kb on - strand at 5841.774 kb on - strand at 5841.774 kb on - strand at 5841.774 kb on - strand at 5841.842 kb on - strand at 5841.842 kb on - strand at 5841.842 kb on - strand at 5841.842 kb on - strand at 5841.848 kb on + strand at 5841.848 kb on + strand at 5841.855 kb on + strand at 5841.855 kb on + strand at 5841.855 kb on + strand at 5841.855 kb on + strand at 5841.856 kb on - strand at 5841.878 kb on + strand at 5841.878 kb on + strand at 5841.879 kb on - strand at 5841.892 kb on + strand at 5841.892 kb on + strand at 5841.893 kb on - strand at 5841.893 kb on - strand at 5841.901 kb on + strand at 5841.901 kb on + strand at 5841.901 kb on + strand at 5841.901 kb on + strand at 5841.902 kb on - strand at 5841.902 kb on - strand at 5841.902 kb on - strand at 5841.930 kb on + strand at 5841.931 kb on - strand at 5841.931 kb on - strand at 5841.939 kb on + strand at 5842.013 kb on + strand at 5842.083 kb on + strand at 5842.131 kb on + strand at 5842.132 kb on - strand at 5842.132 kb on - strand at 5842.144 kb on + strand at 5842.144 kb on + strand at 5842.215 kb on - strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.387 kb on + strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.388 kb on - strand, within QEN71_RS26190 at 5842.468 kb on + strand at 5842.468 kb on + strand at 5842.469 kb on - strand at 5842.469 kb on - strand at 5842.553 kb on + strand at 5842.553 kb on + strand at 5842.553 kb on + strand at 5842.554 kb on - strand at 5842.554 kb on - strand at 5842.554 kb on - strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.579 kb on + strand at 5842.580 kb on - strand at 5842.599 kb on + strand at 5842.600 kb on - strand at 5842.816 kb on + strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.817 kb on - strand, within QEN71_RS26195 at 5842.852 kb on + strand, within QEN71_RS26195 at 5842.853 kb on - strand, within QEN71_RS26195 at 5842.853 kb on - strand, within QEN71_RS26195 at 5842.853 kb on - strand, within QEN71_RS26195 at 5843.238 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.428 kb on + strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200 at 5843.429 kb on - strand, within QEN71_RS26200
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,841,184 + -0.7 5,841,184 + +0.0 5,841,184 + +0.1 5,841,184 + -1.7 5,841,184 + +1.3 5,841,184 + +0.5 5,841,184 + +0.5 5,841,185 - -0.7 5,841,185 - +1.1 5,841,185 - +1.2 5,841,185 - +0.9 5,841,185 - +0.5 5,841,185 - -1.7 5,841,185 - +1.0 5,841,185 - -0.2 5,841,286 + QEN71_RS26185 0.24 +0.7 5,841,286 + QEN71_RS26185 0.24 -0.7 5,841,286 + QEN71_RS26185 0.24 +0.9 5,841,286 + QEN71_RS26185 0.24 +0.3 5,841,286 + QEN71_RS26185 0.24 -1.2 5,841,286 + QEN71_RS26185 0.24 +0.4 5,841,286 + QEN71_RS26185 0.24 -0.9 5,841,286 + QEN71_RS26185 0.24 +0.5 5,841,286 + QEN71_RS26185 0.24 +0.4 5,841,286 + QEN71_RS26185 0.24 -1.3 5,841,286 + QEN71_RS26185 0.24 -1.0 5,841,287 - QEN71_RS26185 0.24 -0.4 5,841,287 - QEN71_RS26185 0.24 +0.1 5,841,287 - QEN71_RS26185 0.24 -0.7 5,841,287 - QEN71_RS26185 0.24 -1.6 5,841,287 - QEN71_RS26185 0.24 -0.8 5,841,287 - QEN71_RS26185 0.24 +1.1 5,841,287 - QEN71_RS26185 0.24 +0.1 5,841,287 - QEN71_RS26185 0.24 +1.6 5,841,287 - QEN71_RS26185 0.24 +0.4 5,841,287 - QEN71_RS26185 0.24 +0.7 5,841,287 - QEN71_RS26185 0.24 +0.4 5,841,287 - QEN71_RS26185 0.24 -0.9 5,841,358 + QEN71_RS26185 0.35 -0.7 5,841,358 + QEN71_RS26185 0.35 -1.7 5,841,359 - QEN71_RS26185 0.35 +1.1 5,841,451 + QEN71_RS26185 0.49 -0.5 5,841,451 + QEN71_RS26185 0.49 +0.1 5,841,451 + QEN71_RS26185 0.49 -0.4 5,841,452 - QEN71_RS26185 0.50 +0.3 5,841,452 - QEN71_RS26185 0.50 +0.3 5,841,452 - QEN71_RS26185 0.50 +0.5 5,841,543 - QEN71_RS26185 0.64 +0.2 5,841,587 + QEN71_RS26185 0.71 -0.2 5,841,587 + QEN71_RS26185 0.71 -0.7 5,841,587 + QEN71_RS26185 0.71 -0.2 5,841,587 + QEN71_RS26185 0.71 -0.1 5,841,588 - QEN71_RS26185 0.71 -1.1 5,841,588 - QEN71_RS26185 0.71 -0.6 5,841,765 + +0.4 5,841,765 + -0.1 5,841,765 + +0.7 5,841,765 + +0.3 5,841,765 + +0.3 5,841,765 + -0.0 5,841,765 + +0.2 5,841,765 + -0.1 5,841,766 - -0.7 5,841,766 - -0.3 5,841,773 + +1.7 5,841,773 + -0.6 5,841,773 + +0.3 5,841,773 + +0.1 5,841,773 + +0.2 5,841,773 + -1.0 5,841,774 - -0.2 5,841,774 - -0.4 5,841,774 - -0.7 5,841,774 - +0.3 5,841,774 - -0.0 5,841,774 - +0.3 5,841,774 - +1.1 5,841,842 - -0.8 5,841,842 - +0.1 5,841,842 - -0.5 5,841,842 - -0.3 5,841,848 + -0.1 5,841,848 + -0.1 5,841,855 + +0.1 5,841,855 + -0.5 5,841,855 + -0.2 5,841,855 + -1.3 5,841,856 - -0.5 5,841,878 + +0.3 5,841,878 + -0.4 5,841,879 - +0.1 5,841,892 + -0.7 5,841,892 + +0.1 5,841,893 - +0.4 5,841,893 - +0.1 5,841,901 + -0.4 5,841,901 + -0.9 5,841,901 + -1.6 5,841,901 + -1.6 5,841,902 - +0.3 5,841,902 - -1.6 5,841,902 - +0.4 5,841,930 + -0.2 5,841,931 - -1.2 5,841,931 - -0.9 5,841,939 + +0.4 5,842,013 + +0.8 5,842,083 + -0.9 5,842,131 + -1.1 5,842,132 - -0.6 5,842,132 - +0.1 5,842,144 + +0.2 5,842,144 + +0.0 5,842,215 - QEN71_RS26190 0.16 -1.1 5,842,387 + QEN71_RS26190 0.72 -1.8 5,842,387 + QEN71_RS26190 0.72 -3.0 5,842,387 + QEN71_RS26190 0.72 -1.4 5,842,387 + QEN71_RS26190 0.72 -2.9 5,842,387 + QEN71_RS26190 0.72 -0.9 5,842,387 + QEN71_RS26190 0.72 -2.5 5,842,387 + QEN71_RS26190 0.72 -3.0 5,842,387 + QEN71_RS26190 0.72 -1.6 5,842,388 - QEN71_RS26190 0.73 -1.3 5,842,388 - QEN71_RS26190 0.73 -2.6 5,842,388 - QEN71_RS26190 0.73 -1.8 5,842,388 - QEN71_RS26190 0.73 +0.8 5,842,388 - QEN71_RS26190 0.73 -1.9 5,842,388 - QEN71_RS26190 0.73 -0.2 5,842,468 + -1.0 5,842,468 + +0.4 5,842,469 - +0.5 5,842,469 - -1.1 5,842,553 + -0.3 5,842,553 + -0.2 5,842,553 + -0.2 5,842,554 - -2.6 5,842,554 - -1.8 5,842,554 - +1.6 5,842,579 + -0.8 5,842,579 + +1.1 5,842,579 + -0.0 5,842,579 + -0.3 5,842,579 + +2.1 5,842,579 + +0.3 5,842,580 - -0.9 5,842,599 + +0.3 5,842,600 - -1.2 5,842,816 + QEN71_RS26195 0.59 -1.4 5,842,817 - QEN71_RS26195 0.59 -0.2 5,842,817 - QEN71_RS26195 0.59 -0.5 5,842,817 - QEN71_RS26195 0.59 -0.7 5,842,817 - QEN71_RS26195 0.59 -0.9 5,842,817 - QEN71_RS26195 0.59 -2.3 5,842,852 + QEN71_RS26195 0.68 -2.2 5,842,853 - QEN71_RS26195 0.68 -0.5 5,842,853 - QEN71_RS26195 0.68 -0.5 5,842,853 - QEN71_RS26195 0.68 -0.5 5,843,238 + QEN71_RS26200 0.45 -0.7 5,843,428 + QEN71_RS26200 0.84 -1.7 5,843,428 + QEN71_RS26200 0.84 +0.0 5,843,428 + QEN71_RS26200 0.84 +0.2 5,843,428 + QEN71_RS26200 0.84 -1.3 5,843,428 + QEN71_RS26200 0.84 -0.1 5,843,429 - QEN71_RS26200 0.84 +1.1 5,843,429 - QEN71_RS26200 0.84 -0.1 5,843,429 - QEN71_RS26200 0.84 -0.8 5,843,429 - QEN71_RS26200 0.84 +1.1 5,843,429 - QEN71_RS26200 0.84 -2.3
Or see this region's nucleotide sequence