Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26040 and QEN71_RS26045 are separated by 36 nucleotides QEN71_RS26045 and QEN71_RS26050 are separated by 227 nucleotides
QEN71_RS26040: QEN71_RS26040 - sulfite exporter TauE/SafE family protein, at 5,804,846 to 5,805,634
_RS26040
QEN71_RS26045: QEN71_RS26045 - hypothetical protein, at 5,805,671 to 5,805,925
_RS26045
QEN71_RS26050: QEN71_RS26050 - D-(-)-3-hydroxybutyrate oligomer hydrolase, at 5,806,153 to 5,808,273
_RS26050
Position (kb)
5805
5806 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 5804.674 kb on + strand at 5804.675 kb on - strand at 5804.702 kb on - strand at 5804.702 kb on - strand at 5804.823 kb on + strand at 5804.824 kb on - strand at 5804.824 kb on - strand at 5804.824 kb on - strand at 5805.006 kb on - strand, within QEN71_RS26040 at 5805.006 kb on - strand, within QEN71_RS26040 at 5805.006 kb on - strand, within QEN71_RS26040 at 5805.006 kb on - strand, within QEN71_RS26040 at 5805.384 kb on - strand, within QEN71_RS26040 at 5805.545 kb on + strand, within QEN71_RS26040 at 5805.545 kb on + strand, within QEN71_RS26040 at 5805.546 kb on - strand, within QEN71_RS26040 at 5805.546 kb on - strand, within QEN71_RS26040 at 5805.546 kb on - strand, within QEN71_RS26040 at 5805.650 kb on - strand at 5805.730 kb on + strand, within QEN71_RS26045 at 5805.741 kb on + strand, within QEN71_RS26045 at 5805.741 kb on + strand, within QEN71_RS26045 at 5805.742 kb on - strand, within QEN71_RS26045 at 5805.742 kb on - strand, within QEN71_RS26045 at 5805.903 kb on + strand at 5805.903 kb on + strand at 5805.903 kb on + strand at 5805.903 kb on + strand at 5805.903 kb on + strand at 5805.903 kb on + strand at 5805.903 kb on + strand at 5805.904 kb on - strand at 5805.904 kb on - strand at 5805.904 kb on - strand at 5805.904 kb on - strand at 5805.904 kb on - strand at 5805.905 kb on + strand at 5805.905 kb on + strand at 5805.905 kb on + strand at 5805.906 kb on - strand at 5805.906 kb on - strand at 5805.906 kb on - strand at 5805.906 kb on - strand at 5805.906 kb on - strand at 5805.925 kb on + strand at 5805.925 kb on + strand at 5805.926 kb on - strand at 5805.948 kb on + strand at 5805.949 kb on - strand at 5805.959 kb on + strand at 5805.960 kb on - strand at 5806.358 kb on + strand at 5806.358 kb on + strand at 5806.358 kb on + strand at 5806.358 kb on + strand at 5806.358 kb on + strand at 5806.358 kb on + strand at 5806.358 kb on + strand at 5806.359 kb on - strand at 5806.359 kb on - strand at 5806.359 kb on - strand at 5806.359 kb on - strand at 5806.359 kb on - strand at 5806.361 kb on + strand at 5806.361 kb on + strand at 5806.361 kb on + strand at 5806.361 kb on + strand at 5806.361 kb on + strand at 5806.361 kb on + strand at 5806.362 kb on - strand at 5806.362 kb on - strand at 5806.362 kb on - strand at 5806.362 kb on - strand at 5806.362 kb on - strand at 5806.362 kb on - strand at 5806.362 kb on - strand at 5806.439 kb on + strand, within QEN71_RS26050 at 5806.439 kb on + strand, within QEN71_RS26050 at 5806.440 kb on - strand, within QEN71_RS26050 at 5806.440 kb on - strand, within QEN71_RS26050 at 5806.440 kb on - strand, within QEN71_RS26050 at 5806.440 kb on - strand, within QEN71_RS26050 at 5806.440 kb on - strand, within QEN71_RS26050 at 5806.440 kb on - strand, within QEN71_RS26050 at 5806.440 kb on - strand, within QEN71_RS26050 at 5806.490 kb on + strand, within QEN71_RS26050 at 5806.490 kb on + strand, within QEN71_RS26050 at 5806.491 kb on - strand, within QEN71_RS26050 at 5806.712 kb on + strand, within QEN71_RS26050 at 5806.712 kb on + strand, within QEN71_RS26050 at 5806.712 kb on + strand, within QEN71_RS26050 at 5806.712 kb on + strand, within QEN71_RS26050 at 5806.713 kb on - strand, within QEN71_RS26050 at 5806.713 kb on - strand, within QEN71_RS26050 at 5806.871 kb on + strand, within QEN71_RS26050 at 5806.871 kb on + strand, within QEN71_RS26050 at 5806.872 kb on - strand, within QEN71_RS26050 at 5806.883 kb on + strand, within QEN71_RS26050 at 5806.883 kb on + strand, within QEN71_RS26050 at 5806.884 kb on - strand, within QEN71_RS26050 at 5806.884 kb on - strand, within QEN71_RS26050 at 5806.884 kb on - strand, within QEN71_RS26050 at 5806.884 kb on - strand, within QEN71_RS26050 at 5806.884 kb on - strand, within QEN71_RS26050 at 5806.884 kb on - strand, within QEN71_RS26050 at 5806.884 kb on - strand, within QEN71_RS26050
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,804,674 + +0.1 5,804,675 - +0.7 5,804,702 - -0.4 5,804,702 - -0.2 5,804,823 + +0.3 5,804,824 - +0.3 5,804,824 - -0.5 5,804,824 - +0.4 5,805,006 - QEN71_RS26040 0.20 -0.3 5,805,006 - QEN71_RS26040 0.20 -1.4 5,805,006 - QEN71_RS26040 0.20 +0.3 5,805,006 - QEN71_RS26040 0.20 +0.2 5,805,384 - QEN71_RS26040 0.68 -0.0 5,805,545 + QEN71_RS26040 0.89 +0.2 5,805,545 + QEN71_RS26040 0.89 -0.9 5,805,546 - QEN71_RS26040 0.89 +1.0 5,805,546 - QEN71_RS26040 0.89 -0.6 5,805,546 - QEN71_RS26040 0.89 -2.0 5,805,650 - +0.3 5,805,730 + QEN71_RS26045 0.23 -0.9 5,805,741 + QEN71_RS26045 0.27 +0.6 5,805,741 + QEN71_RS26045 0.27 +0.2 5,805,742 - QEN71_RS26045 0.28 -2.1 5,805,742 - QEN71_RS26045 0.28 -3.9 5,805,903 + -1.1 5,805,903 + -1.9 5,805,903 + -1.2 5,805,903 + -0.1 5,805,903 + -0.2 5,805,903 + -0.1 5,805,903 + -0.8 5,805,904 - -0.5 5,805,904 - -1.2 5,805,904 - -1.1 5,805,904 - +1.1 5,805,904 - -0.9 5,805,905 + -0.5 5,805,905 + -0.2 5,805,905 + +0.4 5,805,906 - -0.5 5,805,906 - -0.4 5,805,906 - -0.4 5,805,906 - -0.7 5,805,906 - -0.5 5,805,925 + -0.2 5,805,925 + +0.1 5,805,926 - +0.5 5,805,948 + -0.5 5,805,949 - +1.4 5,805,959 + +0.3 5,805,960 - +0.2 5,806,358 + -1.3 5,806,358 + +0.2 5,806,358 + +0.0 5,806,358 + +1.3 5,806,358 + -0.2 5,806,358 + -0.8 5,806,358 + -1.2 5,806,359 - +0.6 5,806,359 - -0.2 5,806,359 - +1.1 5,806,359 - -0.3 5,806,359 - +2.3 5,806,361 + -0.2 5,806,361 + -1.1 5,806,361 + -0.1 5,806,361 + -0.2 5,806,361 + -1.2 5,806,361 + -1.0 5,806,362 - +0.5 5,806,362 - -0.5 5,806,362 - -0.1 5,806,362 - -1.5 5,806,362 - +0.1 5,806,362 - +0.2 5,806,362 - -0.3 5,806,439 + QEN71_RS26050 0.13 -0.4 5,806,439 + QEN71_RS26050 0.13 +0.1 5,806,440 - QEN71_RS26050 0.14 -1.4 5,806,440 - QEN71_RS26050 0.14 +0.5 5,806,440 - QEN71_RS26050 0.14 -1.2 5,806,440 - QEN71_RS26050 0.14 -0.5 5,806,440 - QEN71_RS26050 0.14 -2.9 5,806,440 - QEN71_RS26050 0.14 -2.1 5,806,440 - QEN71_RS26050 0.14 -0.1 5,806,490 + QEN71_RS26050 0.16 +0.1 5,806,490 + QEN71_RS26050 0.16 -0.3 5,806,491 - QEN71_RS26050 0.16 -2.2 5,806,712 + QEN71_RS26050 0.26 -0.0 5,806,712 + QEN71_RS26050 0.26 -0.0 5,806,712 + QEN71_RS26050 0.26 +0.9 5,806,712 + QEN71_RS26050 0.26 -0.1 5,806,713 - QEN71_RS26050 0.26 -1.0 5,806,713 - QEN71_RS26050 0.26 +1.1 5,806,871 + QEN71_RS26050 0.34 -0.9 5,806,871 + QEN71_RS26050 0.34 +1.4 5,806,872 - QEN71_RS26050 0.34 +0.0 5,806,883 + QEN71_RS26050 0.34 +1.1 5,806,883 + QEN71_RS26050 0.34 -1.2 5,806,884 - QEN71_RS26050 0.34 -1.2 5,806,884 - QEN71_RS26050 0.34 +0.0 5,806,884 - QEN71_RS26050 0.34 +0.2 5,806,884 - QEN71_RS26050 0.34 +1.4 5,806,884 - QEN71_RS26050 0.34 -0.1 5,806,884 - QEN71_RS26050 0.34 -0.5 5,806,884 - QEN71_RS26050 0.34 -1.1
Or see this region's nucleotide sequence