Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25240 and QEN71_RS25245 are separated by 107 nucleotides QEN71_RS25245 and QEN71_RS25250 overlap by 4 nucleotides QEN71_RS25250 and QEN71_RS25255 are separated by 18 nucleotides
QEN71_RS25240: QEN71_RS25240 - sulfate adenylyltransferase subunit CysD, at 5,615,907 to 5,616,869
_RS25240
QEN71_RS25245: QEN71_RS25245 - phosphoadenylyl-sulfate reductase, at 5,616,977 to 5,617,717
_RS25245
QEN71_RS25250: QEN71_RS25250 - DUF934 domain-containing protein, at 5,617,714 to 5,618,259
_RS25250
QEN71_RS25255: QEN71_RS25255 - nitrite/sulfite reductase, at 5,618,278 to 5,619,957
_RS25255
Position (kb) 5617
5618
5619 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5616.773 kb on + strand at 5616.773 kb on + strand at 5616.774 kb on - strand at 5616.774 kb on - strand at 5616.931 kb on + strand at 5616.932 kb on - strand at 5616.932 kb on - strand at 5617.108 kb on + strand, within QEN71_RS25245 at 5617.108 kb on + strand, within QEN71_RS25245 at 5617.108 kb on + strand, within QEN71_RS25245 at 5617.224 kb on + strand, within QEN71_RS25245 at 5617.224 kb on + strand, within QEN71_RS25245 at 5617.224 kb on + strand, within QEN71_RS25245 at 5617.470 kb on + strand, within QEN71_RS25245 at 5617.476 kb on + strand, within QEN71_RS25245 at 5617.717 kb on + strand at 5617.718 kb on - strand at 5617.718 kb on - strand at 5617.793 kb on + strand, within QEN71_RS25250 at 5617.793 kb on + strand, within QEN71_RS25250 at 5617.794 kb on - strand, within QEN71_RS25250 at 5617.794 kb on - strand, within QEN71_RS25250 at 5617.859 kb on + strand, within QEN71_RS25250 at 5617.883 kb on + strand, within QEN71_RS25250 at 5617.883 kb on + strand, within QEN71_RS25250 at 5617.937 kb on + strand, within QEN71_RS25250 at 5617.937 kb on + strand, within QEN71_RS25250 at 5617.937 kb on + strand, within QEN71_RS25250 at 5617.938 kb on - strand, within QEN71_RS25250 at 5617.938 kb on - strand, within QEN71_RS25250 at 5617.938 kb on - strand, within QEN71_RS25250 at 5617.938 kb on - strand, within QEN71_RS25250 at 5617.943 kb on + strand, within QEN71_RS25250 at 5617.944 kb on - strand, within QEN71_RS25250 at 5617.944 kb on - strand, within QEN71_RS25250 at 5618.306 kb on + strand at 5618.306 kb on + strand at 5618.306 kb on + strand at 5618.307 kb on - strand at 5618.307 kb on - strand at 5618.307 kb on - strand at 5618.307 kb on - strand at 5618.345 kb on + strand at 5618.345 kb on + strand at 5618.345 kb on + strand at 5618.346 kb on - strand at 5618.346 kb on - strand at 5618.346 kb on - strand at 5618.346 kb on - strand at 5618.621 kb on + strand, within QEN71_RS25255 at 5618.621 kb on + strand, within QEN71_RS25255 at 5618.621 kb on + strand, within QEN71_RS25255 at 5618.622 kb on - strand, within QEN71_RS25255 at 5618.789 kb on + strand, within QEN71_RS25255 at 5618.790 kb on - strand, within QEN71_RS25255 at 5618.861 kb on + strand, within QEN71_RS25255 at 5618.861 kb on + strand, within QEN71_RS25255 at 5618.862 kb on - strand, within QEN71_RS25255 at 5618.957 kb on + strand, within QEN71_RS25255 at 5619.042 kb on + strand, within QEN71_RS25255 at 5619.042 kb on + strand, within QEN71_RS25255 at 5619.042 kb on + strand, within QEN71_RS25255 at 5619.042 kb on + strand, within QEN71_RS25255 at 5619.043 kb on - strand, within QEN71_RS25255 at 5619.043 kb on - strand, within QEN71_RS25255 at 5619.043 kb on - strand, within QEN71_RS25255 at 5619.065 kb on + strand, within QEN71_RS25255 at 5619.066 kb on - strand, within QEN71_RS25255 at 5619.066 kb on - strand, within QEN71_RS25255 at 5619.084 kb on - strand, within QEN71_RS25255 at 5619.151 kb on + strand, within QEN71_RS25255 at 5619.207 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.218 kb on + strand, within QEN71_RS25255 at 5619.219 kb on - strand, within QEN71_RS25255 at 5619.219 kb on - strand, within QEN71_RS25255 at 5619.219 kb on - strand, within QEN71_RS25255 at 5619.219 kb on - strand, within QEN71_RS25255 at 5619.219 kb on - strand, within QEN71_RS25255 at 5619.219 kb on - strand, within QEN71_RS25255 at 5619.248 kb on + strand, within QEN71_RS25255 at 5619.248 kb on + strand, within QEN71_RS25255 at 5619.249 kb on - strand, within QEN71_RS25255 at 5619.249 kb on - strand, within QEN71_RS25255 at 5619.249 kb on - strand, within QEN71_RS25255 at 5619.249 kb on - strand, within QEN71_RS25255
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,616,773 + -2.9 5,616,773 + -1.9 5,616,774 - -0.2 5,616,774 - -1.2 5,616,931 + -1.5 5,616,932 - -0.7 5,616,932 - -0.5 5,617,108 + QEN71_RS25245 0.18 -4.3 5,617,108 + QEN71_RS25245 0.18 -2.2 5,617,108 + QEN71_RS25245 0.18 -2.7 5,617,224 + QEN71_RS25245 0.33 -2.3 5,617,224 + QEN71_RS25245 0.33 -0.1 5,617,224 + QEN71_RS25245 0.33 -4.1 5,617,470 + QEN71_RS25245 0.67 -0.1 5,617,476 + QEN71_RS25245 0.67 -0.9 5,617,717 + +0.1 5,617,718 - +0.9 5,617,718 - +0.1 5,617,793 + QEN71_RS25250 0.14 -2.3 5,617,793 + QEN71_RS25250 0.14 -2.7 5,617,794 - QEN71_RS25250 0.15 +0.1 5,617,794 - QEN71_RS25250 0.15 +1.9 5,617,859 + QEN71_RS25250 0.27 -0.2 5,617,883 + QEN71_RS25250 0.31 -3.5 5,617,883 + QEN71_RS25250 0.31 -1.6 5,617,937 + QEN71_RS25250 0.41 -2.4 5,617,937 + QEN71_RS25250 0.41 -2.6 5,617,937 + QEN71_RS25250 0.41 -1.6 5,617,938 - QEN71_RS25250 0.41 -2.4 5,617,938 - QEN71_RS25250 0.41 -1.9 5,617,938 - QEN71_RS25250 0.41 -4.0 5,617,938 - QEN71_RS25250 0.41 -1.5 5,617,943 + QEN71_RS25250 0.42 -1.9 5,617,944 - QEN71_RS25250 0.42 -0.5 5,617,944 - QEN71_RS25250 0.42 -0.5 5,618,306 + -1.3 5,618,306 + -1.9 5,618,306 + -2.9 5,618,307 - -2.8 5,618,307 - -1.3 5,618,307 - -0.7 5,618,307 - -0.3 5,618,345 + -1.6 5,618,345 + -3.2 5,618,345 + -3.8 5,618,346 - -2.8 5,618,346 - -1.9 5,618,346 - -1.5 5,618,346 - -3.1 5,618,621 + QEN71_RS25255 0.20 -4.8 5,618,621 + QEN71_RS25255 0.20 -2.1 5,618,621 + QEN71_RS25255 0.20 -3.8 5,618,622 - QEN71_RS25255 0.20 -0.7 5,618,789 + QEN71_RS25255 0.30 -1.8 5,618,790 - QEN71_RS25255 0.30 -3.0 5,618,861 + QEN71_RS25255 0.35 -1.9 5,618,861 + QEN71_RS25255 0.35 -3.2 5,618,862 - QEN71_RS25255 0.35 +0.1 5,618,957 + QEN71_RS25255 0.40 -2.2 5,619,042 + QEN71_RS25255 0.45 -1.9 5,619,042 + QEN71_RS25255 0.45 -3.0 5,619,042 + QEN71_RS25255 0.45 -1.6 5,619,042 + QEN71_RS25255 0.45 -3.4 5,619,043 - QEN71_RS25255 0.46 -1.6 5,619,043 - QEN71_RS25255 0.46 -0.9 5,619,043 - QEN71_RS25255 0.46 -1.8 5,619,065 + QEN71_RS25255 0.47 -3.1 5,619,066 - QEN71_RS25255 0.47 -1.4 5,619,066 - QEN71_RS25255 0.47 -1.3 5,619,084 - QEN71_RS25255 0.48 -1.4 5,619,151 + QEN71_RS25255 0.52 -1.5 5,619,207 + QEN71_RS25255 0.55 +0.3 5,619,218 + QEN71_RS25255 0.56 -1.6 5,619,218 + QEN71_RS25255 0.56 -2.6 5,619,218 + QEN71_RS25255 0.56 -0.7 5,619,218 + QEN71_RS25255 0.56 -2.7 5,619,218 + QEN71_RS25255 0.56 -2.4 5,619,218 + QEN71_RS25255 0.56 +1.3 5,619,218 + QEN71_RS25255 0.56 -0.4 5,619,218 + QEN71_RS25255 0.56 -2.0 5,619,219 - QEN71_RS25255 0.56 +0.1 5,619,219 - QEN71_RS25255 0.56 -2.6 5,619,219 - QEN71_RS25255 0.56 -2.2 5,619,219 - QEN71_RS25255 0.56 -0.3 5,619,219 - QEN71_RS25255 0.56 -0.2 5,619,219 - QEN71_RS25255 0.56 +0.1 5,619,248 + QEN71_RS25255 0.58 -1.7 5,619,248 + QEN71_RS25255 0.58 -2.6 5,619,249 - QEN71_RS25255 0.58 -2.6 5,619,249 - QEN71_RS25255 0.58 -3.4 5,619,249 - QEN71_RS25255 0.58 -3.7 5,619,249 - QEN71_RS25255 0.58 -1.2
Or see this region's nucleotide sequence