Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25235 and QEN71_RS25240 are separated by 23 nucleotides QEN71_RS25240 and QEN71_RS25245 are separated by 107 nucleotides QEN71_RS25245 and QEN71_RS25250 overlap by 4 nucleotides
QEN71_RS25235: QEN71_RS25235 - sulfate adenylyltransferase subunit 1, at 5,614,567 to 5,615,883
_RS25235
QEN71_RS25240: QEN71_RS25240 - sulfate adenylyltransferase subunit CysD, at 5,615,907 to 5,616,869
_RS25240
QEN71_RS25245: QEN71_RS25245 - phosphoadenylyl-sulfate reductase, at 5,616,977 to 5,617,717
_RS25245
QEN71_RS25250: QEN71_RS25250 - DUF934 domain-containing protein, at 5,617,714 to 5,618,259
_RS25250
Position (kb) 5615
5616
5617 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5614.923 kb on + strand, within QEN71_RS25235 at 5614.923 kb on + strand, within QEN71_RS25235 at 5615.114 kb on + strand, within QEN71_RS25235 at 5615.114 kb on + strand, within QEN71_RS25235 at 5615.114 kb on + strand, within QEN71_RS25235 at 5615.115 kb on - strand, within QEN71_RS25235 at 5615.115 kb on - strand, within QEN71_RS25235 at 5615.243 kb on + strand, within QEN71_RS25235 at 5615.348 kb on + strand, within QEN71_RS25235 at 5615.348 kb on + strand, within QEN71_RS25235 at 5615.348 kb on + strand, within QEN71_RS25235 at 5615.348 kb on + strand, within QEN71_RS25235 at 5615.349 kb on - strand, within QEN71_RS25235 at 5615.349 kb on - strand, within QEN71_RS25235 at 5615.349 kb on - strand, within QEN71_RS25235 at 5615.349 kb on - strand, within QEN71_RS25235 at 5615.385 kb on - strand, within QEN71_RS25235 at 5615.385 kb on - strand, within QEN71_RS25235 at 5615.385 kb on - strand, within QEN71_RS25235 at 5615.573 kb on + strand, within QEN71_RS25235 at 5615.574 kb on - strand, within QEN71_RS25235 at 5615.574 kb on - strand, within QEN71_RS25235 at 5615.630 kb on + strand, within QEN71_RS25235 at 5615.631 kb on - strand, within QEN71_RS25235 at 5615.883 kb on + strand at 5615.884 kb on - strand at 5615.908 kb on + strand at 5615.908 kb on + strand at 5615.909 kb on - strand at 5615.915 kb on - strand at 5615.915 kb on - strand at 5616.187 kb on + strand, within QEN71_RS25240 at 5616.188 kb on - strand, within QEN71_RS25240 at 5616.190 kb on + strand, within QEN71_RS25240 at 5616.190 kb on + strand, within QEN71_RS25240 at 5616.191 kb on - strand, within QEN71_RS25240 at 5616.226 kb on + strand, within QEN71_RS25240 at 5616.226 kb on + strand, within QEN71_RS25240 at 5616.227 kb on - strand, within QEN71_RS25240 at 5616.303 kb on - strand, within QEN71_RS25240 at 5616.304 kb on + strand, within QEN71_RS25240 at 5616.305 kb on - strand, within QEN71_RS25240 at 5616.305 kb on - strand, within QEN71_RS25240 at 5616.433 kb on + strand, within QEN71_RS25240 at 5616.608 kb on - strand, within QEN71_RS25240 at 5616.608 kb on - strand, within QEN71_RS25240 at 5616.608 kb on - strand, within QEN71_RS25240 at 5616.608 kb on - strand, within QEN71_RS25240 at 5616.773 kb on + strand at 5616.773 kb on + strand at 5616.774 kb on - strand at 5616.774 kb on - strand at 5616.931 kb on + strand at 5616.932 kb on - strand at 5616.932 kb on - strand at 5617.108 kb on + strand, within QEN71_RS25245 at 5617.108 kb on + strand, within QEN71_RS25245 at 5617.108 kb on + strand, within QEN71_RS25245 at 5617.224 kb on + strand, within QEN71_RS25245 at 5617.224 kb on + strand, within QEN71_RS25245 at 5617.224 kb on + strand, within QEN71_RS25245 at 5617.470 kb on + strand, within QEN71_RS25245 at 5617.476 kb on + strand, within QEN71_RS25245 at 5617.717 kb on + strand at 5617.718 kb on - strand at 5617.718 kb on - strand at 5617.793 kb on + strand, within QEN71_RS25250 at 5617.793 kb on + strand, within QEN71_RS25250 at 5617.794 kb on - strand, within QEN71_RS25250 at 5617.794 kb on - strand, within QEN71_RS25250 at 5617.859 kb on + strand, within QEN71_RS25250
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,614,923 + QEN71_RS25235 0.27 -2.4 5,614,923 + QEN71_RS25235 0.27 -2.0 5,615,114 + QEN71_RS25235 0.42 -2.2 5,615,114 + QEN71_RS25235 0.42 -2.0 5,615,114 + QEN71_RS25235 0.42 -1.8 5,615,115 - QEN71_RS25235 0.42 -4.4 5,615,115 - QEN71_RS25235 0.42 -5.4 5,615,243 + QEN71_RS25235 0.51 +0.1 5,615,348 + QEN71_RS25235 0.59 -0.2 5,615,348 + QEN71_RS25235 0.59 -3.6 5,615,348 + QEN71_RS25235 0.59 -1.1 5,615,348 + QEN71_RS25235 0.59 -3.9 5,615,349 - QEN71_RS25235 0.59 -3.0 5,615,349 - QEN71_RS25235 0.59 -2.6 5,615,349 - QEN71_RS25235 0.59 -0.5 5,615,349 - QEN71_RS25235 0.59 -2.6 5,615,385 - QEN71_RS25235 0.62 -2.5 5,615,385 - QEN71_RS25235 0.62 -1.1 5,615,385 - QEN71_RS25235 0.62 -2.5 5,615,573 + QEN71_RS25235 0.76 -2.2 5,615,574 - QEN71_RS25235 0.76 -0.9 5,615,574 - QEN71_RS25235 0.76 -3.4 5,615,630 + QEN71_RS25235 0.81 +0.5 5,615,631 - QEN71_RS25235 0.81 -0.2 5,615,883 + -1.2 5,615,884 - -2.5 5,615,908 + -3.1 5,615,908 + -1.2 5,615,909 - -0.1 5,615,915 - -1.2 5,615,915 - -3.8 5,616,187 + QEN71_RS25240 0.29 +0.4 5,616,188 - QEN71_RS25240 0.29 -2.1 5,616,190 + QEN71_RS25240 0.29 -3.7 5,616,190 + QEN71_RS25240 0.29 -1.1 5,616,191 - QEN71_RS25240 0.29 -4.4 5,616,226 + QEN71_RS25240 0.33 -2.6 5,616,226 + QEN71_RS25240 0.33 -3.2 5,616,227 - QEN71_RS25240 0.33 -1.1 5,616,303 - QEN71_RS25240 0.41 -2.3 5,616,304 + QEN71_RS25240 0.41 -3.7 5,616,305 - QEN71_RS25240 0.41 -2.4 5,616,305 - QEN71_RS25240 0.41 -2.2 5,616,433 + QEN71_RS25240 0.55 -2.3 5,616,608 - QEN71_RS25240 0.73 -0.9 5,616,608 - QEN71_RS25240 0.73 -3.3 5,616,608 - QEN71_RS25240 0.73 -1.1 5,616,608 - QEN71_RS25240 0.73 -1.8 5,616,773 + -2.9 5,616,773 + -1.9 5,616,774 - -0.2 5,616,774 - -1.2 5,616,931 + -1.5 5,616,932 - -0.7 5,616,932 - -0.5 5,617,108 + QEN71_RS25245 0.18 -4.3 5,617,108 + QEN71_RS25245 0.18 -2.2 5,617,108 + QEN71_RS25245 0.18 -2.7 5,617,224 + QEN71_RS25245 0.33 -2.3 5,617,224 + QEN71_RS25245 0.33 -0.1 5,617,224 + QEN71_RS25245 0.33 -4.1 5,617,470 + QEN71_RS25245 0.67 -0.1 5,617,476 + QEN71_RS25245 0.67 -0.9 5,617,717 + +0.1 5,617,718 - +0.9 5,617,718 - +0.1 5,617,793 + QEN71_RS25250 0.14 -2.3 5,617,793 + QEN71_RS25250 0.14 -2.7 5,617,794 - QEN71_RS25250 0.15 +0.1 5,617,794 - QEN71_RS25250 0.15 +1.9 5,617,859 + QEN71_RS25250 0.27 -0.2
Or see this region's nucleotide sequence