Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25145 and QEN71_RS25150 are separated by 560 nucleotides QEN71_RS25150 and QEN71_RS25155 overlap by 4 nucleotides QEN71_RS25155 and QEN71_RS25165 are separated by 339 nucleotides
QEN71_RS25145: QEN71_RS25145 - TonB-dependent receptor, at 5,596,518 to 5,598,473
_RS25145
QEN71_RS25150: QEN71_RS25150 - ATPase, at 5,599,034 to 5,599,396
_RS25150
QEN71_RS25155: QEN71_RS25155 - cell division protein ZapA, at 5,599,393 to 5,599,707
_RS25155
QEN71_RS25165: QEN71_RS25165 - EVE domain-containing protein, at 5,600,047 to 5,600,517
_RS25165
Position (kb) 5599
5600 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5598.636 kb on - strand at 5598.687 kb on + strand at 5598.687 kb on + strand at 5598.688 kb on - strand at 5598.688 kb on - strand at 5598.688 kb on - strand at 5598.749 kb on + strand at 5598.768 kb on - strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.800 kb on - strand at 5598.800 kb on - strand at 5598.800 kb on - strand at 5598.800 kb on - strand at 5598.887 kb on + strand at 5598.888 kb on - strand at 5598.888 kb on - strand at 5598.933 kb on - strand at 5598.951 kb on + strand at 5598.957 kb on + strand at 5598.957 kb on + strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.098 kb on - strand, within QEN71_RS25150 at 5599.098 kb on - strand, within QEN71_RS25150 at 5599.099 kb on + strand, within QEN71_RS25150 at 5599.100 kb on - strand, within QEN71_RS25150 at 5599.100 kb on - strand, within QEN71_RS25150 at 5599.392 kb on + strand at 5599.392 kb on + strand at 5599.392 kb on + strand at 5599.435 kb on + strand, within QEN71_RS25155 at 5599.435 kb on + strand, within QEN71_RS25155 at 5599.436 kb on - strand, within QEN71_RS25155 at 5599.590 kb on + strand, within QEN71_RS25155 at 5599.590 kb on + strand, within QEN71_RS25155 at 5599.590 kb on + strand, within QEN71_RS25155 at 5599.590 kb on + strand, within QEN71_RS25155 at 5599.591 kb on - strand, within QEN71_RS25155 at 5599.647 kb on + strand, within QEN71_RS25155 at 5599.647 kb on + strand, within QEN71_RS25155 at 5599.647 kb on + strand, within QEN71_RS25155 at 5599.648 kb on - strand, within QEN71_RS25155 at 5599.648 kb on - strand, within QEN71_RS25155 at 5599.693 kb on + strand at 5599.694 kb on - strand at 5599.694 kb on - strand at 5599.694 kb on - strand at 5599.706 kb on - strand at 5599.706 kb on - strand at 5599.753 kb on + strand at 5599.753 kb on + strand at 5599.753 kb on + strand at 5599.768 kb on + strand at 5599.769 kb on - strand at 5599.769 kb on - strand at 5599.798 kb on + strand at 5599.798 kb on + strand at 5599.798 kb on + strand at 5599.798 kb on + strand at 5599.798 kb on + strand at 5599.798 kb on + strand at 5599.798 kb on + strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.799 kb on - strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.800 kb on + strand at 5599.801 kb on - strand at 5599.801 kb on - strand at 5599.801 kb on - strand at 5599.801 kb on - strand at 5599.801 kb on - strand at 5599.801 kb on - strand at 5599.801 kb on - strand at 5599.818 kb on + strand at 5599.818 kb on + strand at 5599.818 kb on + strand at 5599.818 kb on + strand at 5599.818 kb on + strand at 5599.818 kb on + strand at 5599.818 kb on + strand at 5599.818 kb on + strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.819 kb on - strand at 5599.820 kb on + strand at 5599.820 kb on + strand at 5599.820 kb on + strand at 5599.820 kb on + strand at 5599.820 kb on + strand at 5599.820 kb on + strand at 5599.820 kb on + strand at 5599.821 kb on - strand at 5599.821 kb on - strand at 5599.821 kb on - strand at 5599.821 kb on - strand at 5599.821 kb on - strand at 5599.843 kb on - strand at 5599.874 kb on + strand at 5599.875 kb on - strand at 5599.890 kb on - strand at 5599.890 kb on - strand at 5599.890 kb on - strand at 5599.953 kb on + strand at 5599.953 kb on + strand at 5599.954 kb on - strand at 5599.954 kb on - strand at 5600.146 kb on + strand, within QEN71_RS25165 at 5600.146 kb on + strand, within QEN71_RS25165 at 5600.146 kb on + strand, within QEN71_RS25165 at 5600.146 kb on + strand, within QEN71_RS25165 at 5600.146 kb on + strand, within QEN71_RS25165 at 5600.146 kb on + strand, within QEN71_RS25165 at 5600.146 kb on + strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.147 kb on - strand, within QEN71_RS25165 at 5600.203 kb on + strand, within QEN71_RS25165 at 5600.203 kb on + strand, within QEN71_RS25165 at 5600.203 kb on + strand, within QEN71_RS25165 at 5600.203 kb on + strand, within QEN71_RS25165 at 5600.203 kb on + strand, within QEN71_RS25165 at 5600.203 kb on + strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.204 kb on - strand, within QEN71_RS25165 at 5600.249 kb on + strand, within QEN71_RS25165 at 5600.249 kb on + strand, within QEN71_RS25165 at 5600.250 kb on - strand, within QEN71_RS25165 at 5600.250 kb on - strand, within QEN71_RS25165 at 5600.300 kb on - strand, within QEN71_RS25165 at 5600.302 kb on + strand, within QEN71_RS25165 at 5600.302 kb on + strand, within QEN71_RS25165 at 5600.302 kb on + strand, within QEN71_RS25165 at 5600.302 kb on + strand, within QEN71_RS25165 at 5600.302 kb on + strand, within QEN71_RS25165 at 5600.303 kb on - strand, within QEN71_RS25165 at 5600.303 kb on - strand, within QEN71_RS25165 at 5600.303 kb on - strand, within QEN71_RS25165 at 5600.303 kb on - strand, within QEN71_RS25165 at 5600.303 kb on - strand, within QEN71_RS25165
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,598,636 - +0.4 5,598,687 + +0.4 5,598,687 + -1.3 5,598,688 - +0.2 5,598,688 - -0.2 5,598,688 - -1.7 5,598,749 + +0.1 5,598,768 - -1.6 5,598,799 + +0.6 5,598,799 + -0.1 5,598,799 + +0.1 5,598,799 + -0.1 5,598,799 + +0.8 5,598,799 + +0.2 5,598,799 + -2.1 5,598,799 + -0.8 5,598,800 - -1.1 5,598,800 - +1.8 5,598,800 - +0.3 5,598,800 - +0.2 5,598,887 + +0.5 5,598,888 - -0.5 5,598,888 - -0.5 5,598,933 - +0.2 5,598,951 + -0.3 5,598,957 + -0.2 5,598,957 + +0.5 5,598,958 - -0.8 5,598,958 - +0.8 5,598,958 - +0.6 5,598,958 - -0.5 5,598,958 - -1.0 5,599,097 + QEN71_RS25150 0.17 -2.2 5,599,097 + QEN71_RS25150 0.17 -1.1 5,599,097 + QEN71_RS25150 0.17 -1.2 5,599,097 + QEN71_RS25150 0.17 -1.7 5,599,098 - QEN71_RS25150 0.18 -2.3 5,599,098 - QEN71_RS25150 0.18 -0.2 5,599,099 + QEN71_RS25150 0.18 -2.4 5,599,100 - QEN71_RS25150 0.18 -1.8 5,599,100 - QEN71_RS25150 0.18 -2.0 5,599,392 + -1.2 5,599,392 + -1.9 5,599,392 + -0.4 5,599,435 + QEN71_RS25155 0.13 +0.8 5,599,435 + QEN71_RS25155 0.13 +0.0 5,599,436 - QEN71_RS25155 0.14 +0.1 5,599,590 + QEN71_RS25155 0.63 -1.7 5,599,590 + QEN71_RS25155 0.63 +0.3 5,599,590 + QEN71_RS25155 0.63 +0.5 5,599,590 + QEN71_RS25155 0.63 -2.1 5,599,591 - QEN71_RS25155 0.63 -1.1 5,599,647 + QEN71_RS25155 0.81 -2.0 5,599,647 + QEN71_RS25155 0.81 -1.2 5,599,647 + QEN71_RS25155 0.81 -0.5 5,599,648 - QEN71_RS25155 0.81 -0.6 5,599,648 - QEN71_RS25155 0.81 -1.2 5,599,693 + -0.1 5,599,694 - -0.5 5,599,694 - -0.8 5,599,694 - +0.7 5,599,706 - -2.2 5,599,706 - -0.8 5,599,753 + -0.9 5,599,753 + +0.4 5,599,753 + -0.6 5,599,768 + -1.1 5,599,769 - -0.7 5,599,769 - -0.1 5,599,798 + +1.5 5,599,798 + -1.2 5,599,798 + -1.6 5,599,798 + +0.1 5,599,798 + -0.9 5,599,798 + +0.0 5,599,798 + -0.1 5,599,799 - +0.6 5,599,799 - +1.7 5,599,799 - -0.9 5,599,799 - -0.5 5,599,799 - -0.3 5,599,799 - -1.0 5,599,799 - +0.0 5,599,799 - -1.6 5,599,799 - -0.3 5,599,800 + +0.3 5,599,800 + +0.9 5,599,800 + +0.1 5,599,800 + -0.3 5,599,800 + -0.3 5,599,800 + -0.2 5,599,800 + +0.1 5,599,800 + +1.3 5,599,800 + -0.2 5,599,800 + -0.3 5,599,800 + -0.9 5,599,801 - +0.2 5,599,801 - -1.4 5,599,801 - +0.1 5,599,801 - -1.3 5,599,801 - -0.4 5,599,801 - -0.7 5,599,801 - +0.8 5,599,818 + +0.1 5,599,818 + +0.0 5,599,818 + +0.9 5,599,818 + +0.1 5,599,818 + -0.2 5,599,818 + -0.4 5,599,818 + -1.0 5,599,818 + -0.9 5,599,819 - +1.4 5,599,819 - -0.1 5,599,819 - +0.1 5,599,819 - -0.2 5,599,819 - +0.6 5,599,819 - -0.0 5,599,819 - -1.5 5,599,819 - +0.8 5,599,819 - +0.4 5,599,819 - -0.5 5,599,820 + +1.5 5,599,820 + -0.9 5,599,820 + +0.9 5,599,820 + -0.0 5,599,820 + -0.1 5,599,820 + +0.5 5,599,820 + +0.2 5,599,821 - +0.4 5,599,821 - +0.6 5,599,821 - +0.2 5,599,821 - -1.1 5,599,821 - +0.1 5,599,843 - +1.1 5,599,874 + -1.7 5,599,875 - +0.5 5,599,890 - -2.2 5,599,890 - -0.0 5,599,890 - +1.0 5,599,953 + +0.3 5,599,953 + +0.4 5,599,954 - -1.3 5,599,954 - +0.4 5,600,146 + QEN71_RS25165 0.21 -1.5 5,600,146 + QEN71_RS25165 0.21 -0.2 5,600,146 + QEN71_RS25165 0.21 -0.2 5,600,146 + QEN71_RS25165 0.21 +0.8 5,600,146 + QEN71_RS25165 0.21 +0.1 5,600,146 + QEN71_RS25165 0.21 +0.1 5,600,146 + QEN71_RS25165 0.21 -0.2 5,600,147 - QEN71_RS25165 0.21 -1.9 5,600,147 - QEN71_RS25165 0.21 -0.2 5,600,147 - QEN71_RS25165 0.21 +1.0 5,600,147 - QEN71_RS25165 0.21 +1.1 5,600,147 - QEN71_RS25165 0.21 +1.1 5,600,147 - QEN71_RS25165 0.21 +0.1 5,600,147 - QEN71_RS25165 0.21 +0.3 5,600,147 - QEN71_RS25165 0.21 -0.0 5,600,203 + QEN71_RS25165 0.33 -0.4 5,600,203 + QEN71_RS25165 0.33 +0.1 5,600,203 + QEN71_RS25165 0.33 +0.4 5,600,203 + QEN71_RS25165 0.33 -0.2 5,600,203 + QEN71_RS25165 0.33 +0.1 5,600,203 + QEN71_RS25165 0.33 -1.2 5,600,204 - QEN71_RS25165 0.33 +0.3 5,600,204 - QEN71_RS25165 0.33 -1.2 5,600,204 - QEN71_RS25165 0.33 +0.1 5,600,204 - QEN71_RS25165 0.33 -1.3 5,600,204 - QEN71_RS25165 0.33 -0.3 5,600,204 - QEN71_RS25165 0.33 +0.1 5,600,204 - QEN71_RS25165 0.33 -0.9 5,600,204 - QEN71_RS25165 0.33 -0.8 5,600,204 - QEN71_RS25165 0.33 -1.4 5,600,249 + QEN71_RS25165 0.43 +1.5 5,600,249 + QEN71_RS25165 0.43 +0.1 5,600,250 - QEN71_RS25165 0.43 -1.5 5,600,250 - QEN71_RS25165 0.43 +0.7 5,600,300 - QEN71_RS25165 0.54 +0.5 5,600,302 + QEN71_RS25165 0.54 +0.9 5,600,302 + QEN71_RS25165 0.54 -0.4 5,600,302 + QEN71_RS25165 0.54 -0.8 5,600,302 + QEN71_RS25165 0.54 -0.8 5,600,302 + QEN71_RS25165 0.54 -1.7 5,600,303 - QEN71_RS25165 0.54 -0.2 5,600,303 - QEN71_RS25165 0.54 +0.8 5,600,303 - QEN71_RS25165 0.54 -0.0 5,600,303 - QEN71_RS25165 0.54 +0.4 5,600,303 - QEN71_RS25165 0.54 -0.9
Or see this region's nucleotide sequence