Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24965 and QEN71_RS24970 are separated by 127 nucleotides QEN71_RS24970 and QEN71_RS24975 are separated by 174 nucleotides
QEN71_RS24965: QEN71_RS24965 - helix-turn-helix transcriptional regulator, at 5,555,583 to 5,556,395
_RS24965
QEN71_RS24970: QEN71_RS24970 - argininosuccinate lyase, at 5,556,523 to 5,557,929
_RS24970
QEN71_RS24975: QEN71_RS24975 - bestrophin family ion channel, at 5,558,104 to 5,559,024
_RS24975
Position (kb) 5556
5557
5558 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 5555.523 kb on + strand at 5555.545 kb on - strand at 5555.545 kb on - strand at 5555.545 kb on - strand at 5555.545 kb on - strand at 5555.778 kb on + strand, within QEN71_RS24965 at 5555.778 kb on + strand, within QEN71_RS24965 at 5555.778 kb on + strand, within QEN71_RS24965 at 5555.778 kb on + strand, within QEN71_RS24965 at 5555.779 kb on - strand, within QEN71_RS24965 at 5555.779 kb on - strand, within QEN71_RS24965 at 5555.779 kb on - strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.874 kb on + strand, within QEN71_RS24965 at 5555.875 kb on - strand, within QEN71_RS24965 at 5555.875 kb on - strand, within QEN71_RS24965 at 5555.875 kb on - strand, within QEN71_RS24965 at 5555.982 kb on + strand, within QEN71_RS24965 at 5555.982 kb on + strand, within QEN71_RS24965 at 5555.982 kb on + strand, within QEN71_RS24965 at 5555.982 kb on + strand, within QEN71_RS24965 at 5555.982 kb on + strand, within QEN71_RS24965 at 5555.982 kb on + strand, within QEN71_RS24965 at 5555.982 kb on + strand, within QEN71_RS24965 at 5555.983 kb on - strand, within QEN71_RS24965 at 5555.983 kb on - strand, within QEN71_RS24965 at 5555.983 kb on - strand, within QEN71_RS24965 at 5556.084 kb on + strand, within QEN71_RS24965 at 5556.084 kb on + strand, within QEN71_RS24965 at 5556.084 kb on + strand, within QEN71_RS24965 at 5556.085 kb on - strand, within QEN71_RS24965 at 5556.160 kb on - strand, within QEN71_RS24965 at 5556.160 kb on - strand, within QEN71_RS24965 at 5556.160 kb on - strand, within QEN71_RS24965 at 5556.328 kb on - strand at 5556.436 kb on + strand at 5556.436 kb on + strand at 5556.436 kb on + strand at 5556.540 kb on + strand at 5556.541 kb on - strand at 5556.541 kb on - strand at 5556.541 kb on - strand at 5556.601 kb on + strand at 5556.601 kb on + strand at 5556.602 kb on - strand at 5556.602 kb on - strand at 5557.057 kb on + strand, within QEN71_RS24970 at 5557.058 kb on - strand, within QEN71_RS24970 at 5557.058 kb on - strand, within QEN71_RS24970 at 5557.156 kb on + strand, within QEN71_RS24970 at 5557.156 kb on + strand, within QEN71_RS24970 at 5557.156 kb on + strand, within QEN71_RS24970 at 5557.492 kb on + strand, within QEN71_RS24970 at 5557.493 kb on - strand, within QEN71_RS24970 at 5557.493 kb on - strand, within QEN71_RS24970 at 5557.493 kb on - strand, within QEN71_RS24970 at 5557.493 kb on - strand, within QEN71_RS24970 at 5557.660 kb on + strand, within QEN71_RS24970 at 5557.660 kb on + strand, within QEN71_RS24970 at 5557.660 kb on + strand, within QEN71_RS24970 at 5557.660 kb on + strand, within QEN71_RS24970 at 5557.661 kb on - strand, within QEN71_RS24970 at 5557.826 kb on - strand at 5557.826 kb on - strand at 5557.826 kb on - strand at 5557.918 kb on - strand at 5557.918 kb on - strand at 5557.918 kb on - strand at 5557.931 kb on - strand at 5558.090 kb on + strand at 5558.090 kb on + strand at 5558.090 kb on + strand at 5558.262 kb on + strand, within QEN71_RS24975 at 5558.262 kb on + strand, within QEN71_RS24975 at 5558.263 kb on - strand, within QEN71_RS24975 at 5558.263 kb on - strand, within QEN71_RS24975 at 5558.263 kb on - strand, within QEN71_RS24975 at 5558.263 kb on - strand, within QEN71_RS24975 at 5558.298 kb on + strand, within QEN71_RS24975 at 5558.298 kb on + strand, within QEN71_RS24975 at 5558.298 kb on + strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.299 kb on - strand, within QEN71_RS24975 at 5558.329 kb on + strand, within QEN71_RS24975 at 5558.329 kb on + strand, within QEN71_RS24975 at 5558.329 kb on + strand, within QEN71_RS24975 at 5558.329 kb on + strand, within QEN71_RS24975 at 5558.440 kb on - strand, within QEN71_RS24975 at 5558.684 kb on + strand, within QEN71_RS24975 at 5558.685 kb on - strand, within QEN71_RS24975 at 5558.767 kb on + strand, within QEN71_RS24975 at 5558.767 kb on + strand, within QEN71_RS24975 at 5558.767 kb on + strand, within QEN71_RS24975 at 5558.767 kb on + strand, within QEN71_RS24975 at 5558.768 kb on - strand, within QEN71_RS24975 at 5558.848 kb on + strand, within QEN71_RS24975 at 5558.856 kb on + strand, within QEN71_RS24975 at 5558.857 kb on - strand, within QEN71_RS24975 at 5558.857 kb on - strand, within QEN71_RS24975
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,555,523 + +0.9 5,555,545 - +0.1 5,555,545 - -0.5 5,555,545 - +0.7 5,555,545 - -1.3 5,555,778 + QEN71_RS24965 0.24 +0.1 5,555,778 + QEN71_RS24965 0.24 -1.8 5,555,778 + QEN71_RS24965 0.24 +0.1 5,555,778 + QEN71_RS24965 0.24 -1.3 5,555,779 - QEN71_RS24965 0.24 -0.8 5,555,779 - QEN71_RS24965 0.24 -0.7 5,555,779 - QEN71_RS24965 0.24 -1.9 5,555,874 + QEN71_RS24965 0.36 -0.3 5,555,874 + QEN71_RS24965 0.36 -1.9 5,555,874 + QEN71_RS24965 0.36 -0.5 5,555,874 + QEN71_RS24965 0.36 -0.9 5,555,874 + QEN71_RS24965 0.36 -0.2 5,555,874 + QEN71_RS24965 0.36 +0.2 5,555,874 + QEN71_RS24965 0.36 -0.2 5,555,874 + QEN71_RS24965 0.36 -0.5 5,555,874 + QEN71_RS24965 0.36 +1.1 5,555,874 + QEN71_RS24965 0.36 -1.6 5,555,875 - QEN71_RS24965 0.36 -1.2 5,555,875 - QEN71_RS24965 0.36 -1.8 5,555,875 - QEN71_RS24965 0.36 -0.9 5,555,982 + QEN71_RS24965 0.49 -0.9 5,555,982 + QEN71_RS24965 0.49 -0.7 5,555,982 + QEN71_RS24965 0.49 +0.3 5,555,982 + QEN71_RS24965 0.49 -0.9 5,555,982 + QEN71_RS24965 0.49 -0.5 5,555,982 + QEN71_RS24965 0.49 +0.1 5,555,982 + QEN71_RS24965 0.49 -1.7 5,555,983 - QEN71_RS24965 0.49 +0.1 5,555,983 - QEN71_RS24965 0.49 -1.7 5,555,983 - QEN71_RS24965 0.49 -1.2 5,556,084 + QEN71_RS24965 0.62 -2.7 5,556,084 + QEN71_RS24965 0.62 -0.6 5,556,084 + QEN71_RS24965 0.62 +1.4 5,556,085 - QEN71_RS24965 0.62 -0.3 5,556,160 - QEN71_RS24965 0.71 +0.1 5,556,160 - QEN71_RS24965 0.71 +0.4 5,556,160 - QEN71_RS24965 0.71 -1.5 5,556,328 - -1.4 5,556,436 + -0.5 5,556,436 + +0.5 5,556,436 + -0.7 5,556,540 + -2.4 5,556,541 - -1.8 5,556,541 - -4.0 5,556,541 - -2.2 5,556,601 + -2.7 5,556,601 + -3.2 5,556,602 - -3.3 5,556,602 - -1.7 5,557,057 + QEN71_RS24970 0.38 -4.8 5,557,058 - QEN71_RS24970 0.38 -3.4 5,557,058 - QEN71_RS24970 0.38 -0.9 5,557,156 + QEN71_RS24970 0.45 -1.1 5,557,156 + QEN71_RS24970 0.45 -0.8 5,557,156 + QEN71_RS24970 0.45 -0.4 5,557,492 + QEN71_RS24970 0.69 -3.0 5,557,493 - QEN71_RS24970 0.69 -2.5 5,557,493 - QEN71_RS24970 0.69 -1.7 5,557,493 - QEN71_RS24970 0.69 -3.7 5,557,493 - QEN71_RS24970 0.69 -2.4 5,557,660 + QEN71_RS24970 0.81 -0.2 5,557,660 + QEN71_RS24970 0.81 -2.6 5,557,660 + QEN71_RS24970 0.81 -1.4 5,557,660 + QEN71_RS24970 0.81 -4.5 5,557,661 - QEN71_RS24970 0.81 -4.3 5,557,826 - -4.8 5,557,826 - -2.7 5,557,826 - -3.5 5,557,918 - -5.8 5,557,918 - -0.5 5,557,918 - -3.0 5,557,931 - -0.8 5,558,090 + +0.5 5,558,090 + -0.6 5,558,090 + +0.1 5,558,262 + QEN71_RS24975 0.17 +0.5 5,558,262 + QEN71_RS24975 0.17 -0.4 5,558,263 - QEN71_RS24975 0.17 +0.2 5,558,263 - QEN71_RS24975 0.17 +0.2 5,558,263 - QEN71_RS24975 0.17 -0.3 5,558,263 - QEN71_RS24975 0.17 +2.1 5,558,298 + QEN71_RS24975 0.21 -0.3 5,558,298 + QEN71_RS24975 0.21 +0.1 5,558,298 + QEN71_RS24975 0.21 -0.0 5,558,299 - QEN71_RS24975 0.21 -1.2 5,558,299 - QEN71_RS24975 0.21 -0.4 5,558,299 - QEN71_RS24975 0.21 -0.7 5,558,299 - QEN71_RS24975 0.21 +0.1 5,558,299 - QEN71_RS24975 0.21 +0.4 5,558,299 - QEN71_RS24975 0.21 +0.5 5,558,299 - QEN71_RS24975 0.21 +0.6 5,558,299 - QEN71_RS24975 0.21 -0.7 5,558,299 - QEN71_RS24975 0.21 +0.4 5,558,299 - QEN71_RS24975 0.21 -2.3 5,558,329 + QEN71_RS24975 0.24 -0.4 5,558,329 + QEN71_RS24975 0.24 -1.0 5,558,329 + QEN71_RS24975 0.24 +1.4 5,558,329 + QEN71_RS24975 0.24 +0.3 5,558,440 - QEN71_RS24975 0.36 +0.1 5,558,684 + QEN71_RS24975 0.63 -2.5 5,558,685 - QEN71_RS24975 0.63 -1.1 5,558,767 + QEN71_RS24975 0.72 +0.2 5,558,767 + QEN71_RS24975 0.72 +0.4 5,558,767 + QEN71_RS24975 0.72 -2.4 5,558,767 + QEN71_RS24975 0.72 -0.4 5,558,768 - QEN71_RS24975 0.72 -0.2 5,558,848 + QEN71_RS24975 0.81 -0.2 5,558,856 + QEN71_RS24975 0.82 +1.9 5,558,857 - QEN71_RS24975 0.82 -2.4 5,558,857 - QEN71_RS24975 0.82 -0.3
Or see this region's nucleotide sequence