Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24940 and QEN71_RS24945 are separated by 2 nucleotides QEN71_RS24945 and QEN71_RS24950 overlap by 1 nucleotides
QEN71_RS24940: QEN71_RS24940 - heme biosynthesis protein HemY, at 5,546,341 to 5,547,531
_RS24940
QEN71_RS24945: QEN71_RS24945 - fused uroporphyrinogen-III synthase HemD/membrane protein HemX, at 5,547,534 to 5,549,594
_RS24945
QEN71_RS24950: QEN71_RS24950 - hydroxymethylbilane synthase, at 5,549,594 to 5,550,577
_RS24950
Position (kb) 5547
5548
5549
5550 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5547.108 kb on - strand, within QEN71_RS24940 at 5547.108 kb on - strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.324 kb on + strand, within QEN71_RS24940 at 5547.345 kb on + strand, within QEN71_RS24940 at 5547.345 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.478 kb on + strand at 5547.479 kb on - strand at 5547.479 kb on - strand at 5547.536 kb on - strand at 5547.575 kb on + strand at 5547.575 kb on + strand at 5547.576 kb on - strand at 5547.670 kb on + strand at 5547.787 kb on + strand, within QEN71_RS24945 at 5547.787 kb on + strand, within QEN71_RS24945 at 5547.788 kb on - strand, within QEN71_RS24945 at 5547.788 kb on - strand, within QEN71_RS24945 at 5548.107 kb on + strand, within QEN71_RS24945 at 5548.279 kb on + strand, within QEN71_RS24945 at 5548.280 kb on - strand, within QEN71_RS24945 at 5548.280 kb on - strand, within QEN71_RS24945 at 5548.280 kb on - strand, within QEN71_RS24945 at 5548.564 kb on + strand, within QEN71_RS24945 at 5548.572 kb on - strand, within QEN71_RS24945 at 5548.619 kb on + strand, within QEN71_RS24945 at 5548.647 kb on - strand, within QEN71_RS24945
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,547,108 - QEN71_RS24940 0.64 -1.5 5,547,108 - QEN71_RS24940 0.64 -0.4 5,547,239 + QEN71_RS24940 0.75 -1.6 5,547,239 + QEN71_RS24940 0.75 -0.9 5,547,239 + QEN71_RS24940 0.75 -1.9 5,547,239 + QEN71_RS24940 0.75 -1.4 5,547,240 - QEN71_RS24940 0.75 -0.5 5,547,240 - QEN71_RS24940 0.75 -1.2 5,547,240 - QEN71_RS24940 0.75 -0.5 5,547,240 - QEN71_RS24940 0.75 -1.1 5,547,240 - QEN71_RS24940 0.75 -0.1 5,547,240 - QEN71_RS24940 0.75 -1.9 5,547,324 + QEN71_RS24940 0.83 -0.5 5,547,345 + QEN71_RS24940 0.84 +0.8 5,547,345 + QEN71_RS24940 0.84 -1.3 5,547,357 + QEN71_RS24940 0.85 -3.3 5,547,357 + QEN71_RS24940 0.85 -1.7 5,547,357 + QEN71_RS24940 0.85 -2.2 5,547,357 + QEN71_RS24940 0.85 -1.1 5,547,357 + QEN71_RS24940 0.85 +0.1 5,547,358 - QEN71_RS24940 0.85 -1.9 5,547,358 - QEN71_RS24940 0.85 -0.6 5,547,358 - QEN71_RS24940 0.85 -0.1 5,547,358 - QEN71_RS24940 0.85 -0.6 5,547,358 - QEN71_RS24940 0.85 +0.5 5,547,358 - QEN71_RS24940 0.85 -1.8 5,547,358 - QEN71_RS24940 0.85 +0.1 5,547,358 - QEN71_RS24940 0.85 -1.7 5,547,358 - QEN71_RS24940 0.85 -0.2 5,547,359 + QEN71_RS24940 0.85 -0.8 5,547,359 + QEN71_RS24940 0.85 +0.4 5,547,359 + QEN71_RS24940 0.85 -1.7 5,547,359 + QEN71_RS24940 0.85 -0.1 5,547,359 + QEN71_RS24940 0.85 -0.2 5,547,359 + QEN71_RS24940 0.85 -0.5 5,547,359 + QEN71_RS24940 0.85 -2.0 5,547,359 + QEN71_RS24940 0.85 -0.2 5,547,359 + QEN71_RS24940 0.85 -0.7 5,547,359 + QEN71_RS24940 0.85 -1.4 5,547,359 + QEN71_RS24940 0.85 -0.7 5,547,359 + QEN71_RS24940 0.85 -1.0 5,547,359 + QEN71_RS24940 0.85 -0.9 5,547,359 + QEN71_RS24940 0.85 -0.3 5,547,359 + QEN71_RS24940 0.85 -1.4 5,547,359 + QEN71_RS24940 0.85 -1.0 5,547,359 + QEN71_RS24940 0.85 +0.3 5,547,359 + QEN71_RS24940 0.85 -1.1 5,547,360 - QEN71_RS24940 0.86 -1.3 5,547,360 - QEN71_RS24940 0.86 -1.2 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 +0.1 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 -1.4 5,547,360 - QEN71_RS24940 0.86 -0.9 5,547,360 - QEN71_RS24940 0.86 +1.4 5,547,360 - QEN71_RS24940 0.86 +0.4 5,547,360 - QEN71_RS24940 0.86 -1.8 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 -1.9 5,547,360 - QEN71_RS24940 0.86 -2.4 5,547,360 - QEN71_RS24940 0.86 -1.2 5,547,360 - QEN71_RS24940 0.86 -0.8 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 -2.2 5,547,360 - QEN71_RS24940 0.86 -2.0 5,547,360 - QEN71_RS24940 0.86 -2.8 5,547,478 + +0.1 5,547,479 - -1.0 5,547,479 - -2.6 5,547,536 - -0.3 5,547,575 + +0.4 5,547,575 + -3.2 5,547,576 - -1.8 5,547,670 + -0.6 5,547,787 + QEN71_RS24945 0.12 -3.3 5,547,787 + QEN71_RS24945 0.12 -0.2 5,547,788 - QEN71_RS24945 0.12 -0.5 5,547,788 - QEN71_RS24945 0.12 -1.3 5,548,107 + QEN71_RS24945 0.28 -2.0 5,548,279 + QEN71_RS24945 0.36 -1.3 5,548,280 - QEN71_RS24945 0.36 -1.5 5,548,280 - QEN71_RS24945 0.36 -1.5 5,548,280 - QEN71_RS24945 0.36 -0.2 5,548,564 + QEN71_RS24945 0.50 +0.1 5,548,572 - QEN71_RS24945 0.50 -3.2 5,548,619 + QEN71_RS24945 0.53 -1.6 5,548,647 - QEN71_RS24945 0.54 -2.4
Or see this region's nucleotide sequence