Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24935 and QEN71_RS24940 are separated by 623 nucleotides QEN71_RS24940 and QEN71_RS24945 are separated by 2 nucleotides
QEN71_RS24935: QEN71_RS24935 - MFS transporter, at 5,544,398 to 5,545,717
_RS24935
QEN71_RS24940: QEN71_RS24940 - heme biosynthesis protein HemY, at 5,546,341 to 5,547,531
_RS24940
QEN71_RS24945: QEN71_RS24945 - fused uroporphyrinogen-III synthase HemD/membrane protein HemX, at 5,547,534 to 5,549,594
_RS24945
Position (kb) 5546
5547
5548 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5545.462 kb on + strand, within QEN71_RS24935 at 5545.462 kb on + strand, within QEN71_RS24935 at 5545.463 kb on - strand, within QEN71_RS24935 at 5545.463 kb on - strand, within QEN71_RS24935 at 5545.463 kb on - strand, within QEN71_RS24935 at 5545.463 kb on - strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.465 kb on + strand, within QEN71_RS24935 at 5545.466 kb on - strand, within QEN71_RS24935 at 5545.466 kb on - strand, within QEN71_RS24935 at 5545.466 kb on - strand, within QEN71_RS24935 at 5545.466 kb on - strand, within QEN71_RS24935 at 5545.507 kb on + strand, within QEN71_RS24935 at 5545.507 kb on + strand, within QEN71_RS24935 at 5545.508 kb on - strand, within QEN71_RS24935 at 5545.508 kb on - strand, within QEN71_RS24935 at 5545.508 kb on - strand, within QEN71_RS24935 at 5545.508 kb on - strand, within QEN71_RS24935 at 5545.555 kb on + strand, within QEN71_RS24935 at 5545.555 kb on + strand, within QEN71_RS24935 at 5545.555 kb on + strand, within QEN71_RS24935 at 5545.555 kb on + strand, within QEN71_RS24935 at 5545.555 kb on + strand, within QEN71_RS24935 at 5545.555 kb on + strand, within QEN71_RS24935 at 5545.556 kb on - strand, within QEN71_RS24935 at 5545.556 kb on - strand, within QEN71_RS24935 at 5545.556 kb on - strand, within QEN71_RS24935 at 5545.592 kb on + strand at 5545.592 kb on + strand at 5545.592 kb on + strand at 5545.593 kb on - strand at 5545.593 kb on - strand at 5545.609 kb on + strand at 5545.609 kb on + strand at 5545.609 kb on + strand at 5545.619 kb on - strand at 5545.619 kb on - strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.643 kb on + strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.644 kb on - strand at 5545.645 kb on + strand at 5545.645 kb on + strand at 5545.645 kb on + strand at 5545.645 kb on + strand at 5545.645 kb on + strand at 5545.646 kb on - strand at 5545.646 kb on - strand at 5545.646 kb on - strand at 5545.646 kb on - strand at 5545.646 kb on - strand at 5545.646 kb on - strand at 5545.646 kb on - strand at 5545.660 kb on + strand at 5545.704 kb on + strand at 5545.705 kb on - strand at 5545.705 kb on - strand at 5545.708 kb on + strand at 5545.708 kb on + strand at 5545.708 kb on + strand at 5545.708 kb on + strand at 5545.709 kb on - strand at 5545.709 kb on - strand at 5545.786 kb on - strand at 5545.786 kb on - strand at 5545.789 kb on - strand at 5545.789 kb on - strand at 5545.862 kb on + strand at 5545.930 kb on - strand at 5545.930 kb on - strand at 5545.930 kb on - strand at 5546.092 kb on + strand at 5546.092 kb on + strand at 5546.094 kb on + strand at 5546.094 kb on + strand at 5546.094 kb on + strand at 5546.094 kb on + strand at 5546.094 kb on + strand at 5546.094 kb on + strand at 5546.094 kb on + strand at 5546.094 kb on + strand at 5546.246 kb on + strand at 5546.321 kb on - strand at 5546.342 kb on + strand at 5546.349 kb on + strand at 5546.350 kb on - strand at 5546.350 kb on - strand at 5546.350 kb on - strand at 5546.350 kb on - strand at 5546.350 kb on - strand at 5546.391 kb on + strand at 5546.392 kb on - strand at 5546.392 kb on - strand at 5546.392 kb on - strand at 5546.460 kb on + strand, within QEN71_RS24940 at 5546.472 kb on + strand, within QEN71_RS24940 at 5546.472 kb on + strand, within QEN71_RS24940 at 5546.472 kb on + strand, within QEN71_RS24940 at 5546.472 kb on + strand, within QEN71_RS24940 at 5546.472 kb on + strand, within QEN71_RS24940 at 5546.473 kb on - strand, within QEN71_RS24940 at 5546.473 kb on - strand, within QEN71_RS24940 at 5546.473 kb on - strand, within QEN71_RS24940 at 5546.473 kb on - strand, within QEN71_RS24940 at 5547.108 kb on - strand, within QEN71_RS24940 at 5547.108 kb on - strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.239 kb on + strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.240 kb on - strand, within QEN71_RS24940 at 5547.324 kb on + strand, within QEN71_RS24940 at 5547.345 kb on + strand, within QEN71_RS24940 at 5547.345 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.357 kb on + strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.358 kb on - strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.359 kb on + strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.360 kb on - strand, within QEN71_RS24940 at 5547.478 kb on + strand at 5547.479 kb on - strand at 5547.479 kb on - strand at 5547.536 kb on - strand at 5547.575 kb on + strand at 5547.575 kb on + strand at 5547.576 kb on - strand at 5547.670 kb on + strand at 5547.787 kb on + strand, within QEN71_RS24945 at 5547.787 kb on + strand, within QEN71_RS24945 at 5547.788 kb on - strand, within QEN71_RS24945 at 5547.788 kb on - strand, within QEN71_RS24945 at 5548.107 kb on + strand, within QEN71_RS24945 at 5548.279 kb on + strand, within QEN71_RS24945 at 5548.280 kb on - strand, within QEN71_RS24945 at 5548.280 kb on - strand, within QEN71_RS24945 at 5548.280 kb on - strand, within QEN71_RS24945
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,545,462 + QEN71_RS24935 0.81 -1.7 5,545,462 + QEN71_RS24935 0.81 +0.8 5,545,463 - QEN71_RS24935 0.81 -0.6 5,545,463 - QEN71_RS24935 0.81 +0.2 5,545,463 - QEN71_RS24935 0.81 -0.6 5,545,463 - QEN71_RS24935 0.81 +0.0 5,545,465 + QEN71_RS24935 0.81 -0.3 5,545,465 + QEN71_RS24935 0.81 -0.4 5,545,465 + QEN71_RS24935 0.81 +0.3 5,545,465 + QEN71_RS24935 0.81 -0.2 5,545,465 + QEN71_RS24935 0.81 -2.2 5,545,465 + QEN71_RS24935 0.81 -0.9 5,545,465 + QEN71_RS24935 0.81 +0.0 5,545,465 + QEN71_RS24935 0.81 -0.8 5,545,466 - QEN71_RS24935 0.81 +0.3 5,545,466 - QEN71_RS24935 0.81 -0.3 5,545,466 - QEN71_RS24935 0.81 -0.2 5,545,466 - QEN71_RS24935 0.81 -1.2 5,545,507 + QEN71_RS24935 0.84 +0.8 5,545,507 + QEN71_RS24935 0.84 +0.4 5,545,508 - QEN71_RS24935 0.84 -0.4 5,545,508 - QEN71_RS24935 0.84 +1.1 5,545,508 - QEN71_RS24935 0.84 -0.4 5,545,508 - QEN71_RS24935 0.84 -0.4 5,545,555 + QEN71_RS24935 0.88 -1.2 5,545,555 + QEN71_RS24935 0.88 -1.6 5,545,555 + QEN71_RS24935 0.88 +0.2 5,545,555 + QEN71_RS24935 0.88 -0.7 5,545,555 + QEN71_RS24935 0.88 -1.0 5,545,555 + QEN71_RS24935 0.88 +0.7 5,545,556 - QEN71_RS24935 0.88 -0.2 5,545,556 - QEN71_RS24935 0.88 -1.2 5,545,556 - QEN71_RS24935 0.88 -0.5 5,545,592 + +0.5 5,545,592 + -0.3 5,545,592 + +0.1 5,545,593 - +1.2 5,545,593 - -0.5 5,545,609 + -0.0 5,545,609 + -2.3 5,545,609 + +0.6 5,545,619 - +1.0 5,545,619 - -1.6 5,545,643 + +0.2 5,545,643 + -1.2 5,545,643 + -0.1 5,545,643 + -0.5 5,545,643 + +0.8 5,545,643 + +1.1 5,545,643 + -2.2 5,545,643 + +0.5 5,545,643 + +0.7 5,545,643 + +0.3 5,545,643 + +0.5 5,545,643 + +0.8 5,545,643 + +2.5 5,545,643 + -0.2 5,545,643 + +0.3 5,545,643 + -1.3 5,545,644 - -0.9 5,545,644 - -1.3 5,545,644 - -1.0 5,545,644 - -0.4 5,545,644 - +0.3 5,545,644 - -0.1 5,545,644 - +0.1 5,545,644 - +0.1 5,545,644 - -1.6 5,545,644 - +0.1 5,545,644 - +0.2 5,545,644 - +0.4 5,545,644 - -1.4 5,545,644 - -0.6 5,545,644 - +0.9 5,545,644 - -1.4 5,545,644 - +0.1 5,545,644 - -0.6 5,545,644 - -0.0 5,545,645 + +0.6 5,545,645 + -0.3 5,545,645 + -0.2 5,545,645 + +0.0 5,545,645 + +0.2 5,545,646 - +0.9 5,545,646 - +0.4 5,545,646 - +2.5 5,545,646 - +0.8 5,545,646 - -1.2 5,545,646 - -0.2 5,545,646 - +0.3 5,545,660 + +0.3 5,545,704 + -2.7 5,545,705 - -0.2 5,545,705 - +0.1 5,545,708 + -0.5 5,545,708 + -0.2 5,545,708 + -0.5 5,545,708 + -0.1 5,545,709 - -0.8 5,545,709 - -0.8 5,545,786 - -1.0 5,545,786 - -2.7 5,545,789 - -0.3 5,545,789 - +0.8 5,545,862 + -2.1 5,545,930 - -1.0 5,545,930 - -0.1 5,545,930 - -1.8 5,546,092 + -0.5 5,546,092 + +0.1 5,546,094 + -0.9 5,546,094 + +0.4 5,546,094 + +0.6 5,546,094 + -0.8 5,546,094 + +0.3 5,546,094 + +0.2 5,546,094 + +0.2 5,546,094 + +1.2 5,546,246 + +1.1 5,546,321 - -0.0 5,546,342 + -0.9 5,546,349 + +1.3 5,546,350 - +0.2 5,546,350 - -2.1 5,546,350 - +0.3 5,546,350 - -0.9 5,546,350 - +1.6 5,546,391 + +0.1 5,546,392 - -0.5 5,546,392 - -1.4 5,546,392 - -0.8 5,546,460 + QEN71_RS24940 0.10 -0.9 5,546,472 + QEN71_RS24940 0.11 +1.1 5,546,472 + QEN71_RS24940 0.11 -2.1 5,546,472 + QEN71_RS24940 0.11 +0.1 5,546,472 + QEN71_RS24940 0.11 -2.3 5,546,472 + QEN71_RS24940 0.11 -0.9 5,546,473 - QEN71_RS24940 0.11 -1.8 5,546,473 - QEN71_RS24940 0.11 -0.7 5,546,473 - QEN71_RS24940 0.11 -0.7 5,546,473 - QEN71_RS24940 0.11 -2.8 5,547,108 - QEN71_RS24940 0.64 -1.5 5,547,108 - QEN71_RS24940 0.64 -0.4 5,547,239 + QEN71_RS24940 0.75 -1.6 5,547,239 + QEN71_RS24940 0.75 -0.9 5,547,239 + QEN71_RS24940 0.75 -1.9 5,547,239 + QEN71_RS24940 0.75 -1.4 5,547,240 - QEN71_RS24940 0.75 -0.5 5,547,240 - QEN71_RS24940 0.75 -1.2 5,547,240 - QEN71_RS24940 0.75 -0.5 5,547,240 - QEN71_RS24940 0.75 -1.1 5,547,240 - QEN71_RS24940 0.75 -0.1 5,547,240 - QEN71_RS24940 0.75 -1.9 5,547,324 + QEN71_RS24940 0.83 -0.5 5,547,345 + QEN71_RS24940 0.84 +0.8 5,547,345 + QEN71_RS24940 0.84 -1.3 5,547,357 + QEN71_RS24940 0.85 -3.3 5,547,357 + QEN71_RS24940 0.85 -1.7 5,547,357 + QEN71_RS24940 0.85 -2.2 5,547,357 + QEN71_RS24940 0.85 -1.1 5,547,357 + QEN71_RS24940 0.85 +0.1 5,547,358 - QEN71_RS24940 0.85 -1.9 5,547,358 - QEN71_RS24940 0.85 -0.6 5,547,358 - QEN71_RS24940 0.85 -0.1 5,547,358 - QEN71_RS24940 0.85 -0.6 5,547,358 - QEN71_RS24940 0.85 +0.5 5,547,358 - QEN71_RS24940 0.85 -1.8 5,547,358 - QEN71_RS24940 0.85 +0.1 5,547,358 - QEN71_RS24940 0.85 -1.7 5,547,358 - QEN71_RS24940 0.85 -0.2 5,547,359 + QEN71_RS24940 0.85 -0.8 5,547,359 + QEN71_RS24940 0.85 +0.4 5,547,359 + QEN71_RS24940 0.85 -1.7 5,547,359 + QEN71_RS24940 0.85 -0.1 5,547,359 + QEN71_RS24940 0.85 -0.2 5,547,359 + QEN71_RS24940 0.85 -0.5 5,547,359 + QEN71_RS24940 0.85 -2.0 5,547,359 + QEN71_RS24940 0.85 -0.2 5,547,359 + QEN71_RS24940 0.85 -0.7 5,547,359 + QEN71_RS24940 0.85 -1.4 5,547,359 + QEN71_RS24940 0.85 -0.7 5,547,359 + QEN71_RS24940 0.85 -1.0 5,547,359 + QEN71_RS24940 0.85 -0.9 5,547,359 + QEN71_RS24940 0.85 -0.3 5,547,359 + QEN71_RS24940 0.85 -1.4 5,547,359 + QEN71_RS24940 0.85 -1.0 5,547,359 + QEN71_RS24940 0.85 +0.3 5,547,359 + QEN71_RS24940 0.85 -1.1 5,547,360 - QEN71_RS24940 0.86 -1.3 5,547,360 - QEN71_RS24940 0.86 -1.2 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 +0.1 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 -1.4 5,547,360 - QEN71_RS24940 0.86 -0.9 5,547,360 - QEN71_RS24940 0.86 +1.4 5,547,360 - QEN71_RS24940 0.86 +0.4 5,547,360 - QEN71_RS24940 0.86 -1.8 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 -1.9 5,547,360 - QEN71_RS24940 0.86 -2.4 5,547,360 - QEN71_RS24940 0.86 -1.2 5,547,360 - QEN71_RS24940 0.86 -0.8 5,547,360 - QEN71_RS24940 0.86 -0.2 5,547,360 - QEN71_RS24940 0.86 -2.2 5,547,360 - QEN71_RS24940 0.86 -2.0 5,547,360 - QEN71_RS24940 0.86 -2.8 5,547,478 + +0.1 5,547,479 - -1.0 5,547,479 - -2.6 5,547,536 - -0.3 5,547,575 + +0.4 5,547,575 + -3.2 5,547,576 - -1.8 5,547,670 + -0.6 5,547,787 + QEN71_RS24945 0.12 -3.3 5,547,787 + QEN71_RS24945 0.12 -0.2 5,547,788 - QEN71_RS24945 0.12 -0.5 5,547,788 - QEN71_RS24945 0.12 -1.3 5,548,107 + QEN71_RS24945 0.28 -2.0 5,548,279 + QEN71_RS24945 0.36 -1.3 5,548,280 - QEN71_RS24945 0.36 -1.5 5,548,280 - QEN71_RS24945 0.36 -1.5 5,548,280 - QEN71_RS24945 0.36 -0.2
Or see this region's nucleotide sequence