Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24395 and QEN71_RS24400 are separated by 301 nucleotides QEN71_RS24400 and QEN71_RS24405 are separated by 264 nucleotides
QEN71_RS24395: QEN71_RS24395 - YebC/PmpR family DNA-binding transcriptional regulator, at 5,427,493 to 5,428,221
_RS24395
QEN71_RS24400: QEN71_RS24400 - phosphoribosylamine--glycine ligase, at 5,428,523 to 5,429,800
_RS24400
QEN71_RS24405: QEN71_RS24405 - oxygen-dependent coproporphyrinogen oxidase, at 5,430,065 to 5,430,997
_RS24405
Position (kb)
5428
5429
5430 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5427.528 kb on + strand at 5427.528 kb on + strand at 5427.528 kb on + strand at 5427.528 kb on + strand at 5427.528 kb on + strand at 5427.528 kb on + strand at 5427.529 kb on - strand at 5427.661 kb on + strand, within QEN71_RS24395 at 5427.661 kb on + strand, within QEN71_RS24395 at 5427.661 kb on + strand, within QEN71_RS24395 at 5427.661 kb on + strand, within QEN71_RS24395 at 5427.661 kb on + strand, within QEN71_RS24395 at 5427.661 kb on + strand, within QEN71_RS24395 at 5427.737 kb on - strand, within QEN71_RS24395 at 5427.760 kb on + strand, within QEN71_RS24395 at 5427.760 kb on + strand, within QEN71_RS24395 at 5427.792 kb on + strand, within QEN71_RS24395 at 5427.792 kb on + strand, within QEN71_RS24395 at 5427.793 kb on - strand, within QEN71_RS24395 at 5427.793 kb on - strand, within QEN71_RS24395 at 5427.793 kb on - strand, within QEN71_RS24395 at 5427.861 kb on + strand, within QEN71_RS24395 at 5427.861 kb on + strand, within QEN71_RS24395 at 5427.861 kb on + strand, within QEN71_RS24395 at 5427.862 kb on - strand, within QEN71_RS24395 at 5428.192 kb on + strand at 5428.192 kb on + strand at 5428.192 kb on + strand at 5428.192 kb on + strand at 5428.192 kb on + strand at 5428.192 kb on + strand at 5428.193 kb on - strand at 5428.193 kb on - strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.194 kb on + strand at 5428.195 kb on - strand at 5428.311 kb on + strand at 5428.311 kb on + strand at 5428.311 kb on + strand at 5428.311 kb on + strand at 5428.341 kb on + strand at 5428.341 kb on + strand at 5428.377 kb on + strand at 5428.377 kb on + strand at 5428.377 kb on + strand at 5428.377 kb on + strand at 5428.454 kb on + strand at 5428.454 kb on + strand at 5428.454 kb on + strand at 5428.505 kb on + strand at 5428.505 kb on + strand at 5428.530 kb on + strand at 5428.531 kb on - strand at 5428.607 kb on + strand at 5428.607 kb on + strand at 5428.607 kb on + strand at 5428.608 kb on - strand at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.916 kb on + strand, within QEN71_RS24400 at 5428.917 kb on - strand, within QEN71_RS24400 at 5428.917 kb on - strand, within QEN71_RS24400 at 5429.213 kb on + strand, within QEN71_RS24400 at 5429.227 kb on + strand, within QEN71_RS24400 at 5429.227 kb on + strand, within QEN71_RS24400 at 5429.227 kb on + strand, within QEN71_RS24400 at 5429.227 kb on + strand, within QEN71_RS24400 at 5429.227 kb on + strand, within QEN71_RS24400 at 5429.227 kb on + strand, within QEN71_RS24400 at 5429.227 kb on + strand, within QEN71_RS24400 at 5429.256 kb on + strand, within QEN71_RS24400 at 5429.256 kb on + strand, within QEN71_RS24400 at 5429.256 kb on + strand, within QEN71_RS24400 at 5429.256 kb on + strand, within QEN71_RS24400 at 5429.257 kb on - strand, within QEN71_RS24400 at 5429.257 kb on - strand, within QEN71_RS24400 at 5429.327 kb on + strand, within QEN71_RS24400 at 5429.537 kb on + strand, within QEN71_RS24400 at 5429.537 kb on + strand, within QEN71_RS24400 at 5429.537 kb on + strand, within QEN71_RS24400 at 5429.538 kb on - strand, within QEN71_RS24400 at 5429.538 kb on - strand, within QEN71_RS24400 at 5429.753 kb on + strand at 5429.753 kb on + strand at 5429.798 kb on + strand at 5429.903 kb on + strand at 5429.997 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand at 5430.061 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 5,427,528 + -1.7 5,427,528 + +0.8 5,427,528 + +0.1 5,427,528 + +0.3 5,427,528 + +2.4 5,427,528 + -0.7 5,427,529 - -0.2 5,427,661 + QEN71_RS24395 0.23 -0.2 5,427,661 + QEN71_RS24395 0.23 -0.5 5,427,661 + QEN71_RS24395 0.23 -2.0 5,427,661 + QEN71_RS24395 0.23 +0.5 5,427,661 + QEN71_RS24395 0.23 -1.4 5,427,661 + QEN71_RS24395 0.23 -0.5 5,427,737 - QEN71_RS24395 0.33 -0.2 5,427,760 + QEN71_RS24395 0.37 -0.0 5,427,760 + QEN71_RS24395 0.37 +1.3 5,427,792 + QEN71_RS24395 0.41 -2.4 5,427,792 + QEN71_RS24395 0.41 +0.0 5,427,793 - QEN71_RS24395 0.41 -0.5 5,427,793 - QEN71_RS24395 0.41 -0.5 5,427,793 - QEN71_RS24395 0.41 -2.3 5,427,861 + QEN71_RS24395 0.50 -0.7 5,427,861 + QEN71_RS24395 0.50 -0.1 5,427,861 + QEN71_RS24395 0.50 +0.3 5,427,862 - QEN71_RS24395 0.51 +0.1 5,428,192 + -0.7 5,428,192 + +1.0 5,428,192 + +0.1 5,428,192 + -0.3 5,428,192 + +1.4 5,428,192 + -0.5 5,428,193 - +0.1 5,428,193 - +0.1 5,428,194 + -0.1 5,428,194 + +2.0 5,428,194 + +0.8 5,428,194 + -1.8 5,428,194 + +0.4 5,428,194 + -1.2 5,428,194 + -0.8 5,428,194 + -0.9 5,428,194 + +0.4 5,428,194 + +0.0 5,428,195 - +0.1 5,428,311 + -0.2 5,428,311 + -0.4 5,428,311 + -0.3 5,428,311 + -0.5 5,428,341 + +0.6 5,428,341 + -1.1 5,428,377 + -0.2 5,428,377 + -0.6 5,428,377 + -0.5 5,428,377 + -0.4 5,428,454 + -0.3 5,428,454 + +0.1 5,428,454 + +0.4 5,428,505 + +0.2 5,428,505 + -1.5 5,428,530 + -1.9 5,428,531 - +0.8 5,428,607 + -2.9 5,428,607 + -2.5 5,428,607 + -0.9 5,428,608 - -1.6 5,428,916 + QEN71_RS24400 0.31 -3.6 5,428,916 + QEN71_RS24400 0.31 -1.2 5,428,916 + QEN71_RS24400 0.31 -3.1 5,428,916 + QEN71_RS24400 0.31 -0.7 5,428,916 + QEN71_RS24400 0.31 -2.9 5,428,916 + QEN71_RS24400 0.31 -2.1 5,428,916 + QEN71_RS24400 0.31 -2.2 5,428,916 + QEN71_RS24400 0.31 -2.6 5,428,916 + QEN71_RS24400 0.31 -3.7 5,428,917 - QEN71_RS24400 0.31 -1.2 5,428,917 - QEN71_RS24400 0.31 -0.9 5,429,213 + QEN71_RS24400 0.54 -1.8 5,429,227 + QEN71_RS24400 0.55 -0.7 5,429,227 + QEN71_RS24400 0.55 -2.7 5,429,227 + QEN71_RS24400 0.55 -2.7 5,429,227 + QEN71_RS24400 0.55 -3.2 5,429,227 + QEN71_RS24400 0.55 -2.1 5,429,227 + QEN71_RS24400 0.55 -0.1 5,429,227 + QEN71_RS24400 0.55 -1.8 5,429,256 + QEN71_RS24400 0.57 -0.2 5,429,256 + QEN71_RS24400 0.57 -3.4 5,429,256 + QEN71_RS24400 0.57 -1.6 5,429,256 + QEN71_RS24400 0.57 -3.6 5,429,257 - QEN71_RS24400 0.57 +0.1 5,429,257 - QEN71_RS24400 0.57 +0.1 5,429,327 + QEN71_RS24400 0.63 -2.1 5,429,537 + QEN71_RS24400 0.79 -1.3 5,429,537 + QEN71_RS24400 0.79 -2.0 5,429,537 + QEN71_RS24400 0.79 -3.4 5,429,538 - QEN71_RS24400 0.79 +0.1 5,429,538 - QEN71_RS24400 0.79 -1.2 5,429,753 + -2.4 5,429,753 + -3.0 5,429,798 + -0.5 5,429,903 + -0.7 5,429,997 + -0.1 5,430,061 + +0.5 5,430,061 + -0.7 5,430,061 + -0.0 5,430,061 + -0.2 5,430,061 + -1.9 5,430,061 + +0.6 5,430,061 + +0.3 5,430,061 + -0.0 5,430,061 + +0.3 5,430,061 + -0.1 5,430,061 + +0.3 5,430,061 + +0.3 5,430,061 + -0.3 5,430,061 + -0.4 5,430,061 + -0.7 5,430,061 + -0.4 5,430,061 + +0.4 5,430,061 + +0.0 5,430,061 + -0.6
Or see this region's nucleotide sequence