Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS24345

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
5,413,882	+		QEN71_RS24335	0.56	+0.1
5,413,963	+		QEN71_RS24335	0.81	-0.6
5,413,964	-		QEN71_RS24335	0.81	-1.1
5,413,964	-		QEN71_RS24335	0.81	-0.0
5,414,003	-				-1.0
5,414,103	+				-1.0
5,414,122	+				-2.2
5,414,122	+				+0.3
5,414,136	+				-0.6
5,414,137	-				-2.2
5,414,151	-				+0.6
5,414,151	-				-1.4
5,414,151	-				-0.6
5,414,151	-				-1.8
5,414,184	+				+0.1
5,414,184	+				+1.1
5,414,184	+				+1.0
5,414,184	+				-1.1
5,414,185	-				+0.2
5,414,185	-				-1.1
5,414,185	-				-0.3
5,414,185	-				-0.5
5,414,185	-				+1.4
5,414,185	-				-1.5
5,414,186	+				+0.3
5,414,187	-				+1.0
5,414,211	+				-1.5
5,414,211	+				+0.5
5,414,211	+				-0.5
5,414,211	+				-0.7
5,414,211	+				-0.9
5,414,212	-				-0.3
5,414,212	-				-0.6
5,414,212	-				-0.8
5,414,212	-				-1.1
5,414,212	-				+0.6
5,414,212	-				-1.4
5,414,212	-				-1.1
5,414,212	-				-0.2
5,414,212	-				+0.5
5,414,212	-				+0.4
5,414,212	-				+0.9
5,414,212	-				-0.8
5,414,212	-				+0.2
5,414,212	-				-2.2
5,414,212	-				-0.1
5,414,264	+		QEN71_RS24340	0.14	-1.6
5,414,264	+		QEN71_RS24340	0.14	-0.3
5,414,264	+		QEN71_RS24340	0.14	+1.4
5,414,264	+		QEN71_RS24340	0.14	-1.4
5,414,264	+		QEN71_RS24340	0.14	+0.2
5,414,265	-		QEN71_RS24340	0.14	-0.0
5,414,265	-		QEN71_RS24340	0.14	-0.2
5,414,265	-		QEN71_RS24340	0.14	+0.1
5,414,265	-		QEN71_RS24340	0.14	+0.1
5,414,276	+		QEN71_RS24340	0.16	-0.9
5,414,276	+		QEN71_RS24340	0.16	-0.2
5,414,276	+		QEN71_RS24340	0.16	-0.9
5,414,276	+		QEN71_RS24340	0.16	-0.4
5,414,276	+		QEN71_RS24340	0.16	-0.3
5,414,277	-		QEN71_RS24340	0.16	-1.1
5,414,277	-		QEN71_RS24340	0.16	-0.9
5,414,277	-		QEN71_RS24340	0.16	-2.1
5,414,277	-		QEN71_RS24340	0.16	-1.2
5,414,379	-		QEN71_RS24340	0.31	-1.2
5,414,559	-		QEN71_RS24340	0.57	+0.3
5,414,559	-		QEN71_RS24340	0.57	+1.6
5,414,836	+				+0.6
5,414,836	+				+1.3
5,414,836	+				+0.5
5,414,837	-				+0.5
5,414,837	-				+0.7
5,414,837	-				-0.2
5,414,845	-				+1.2
5,414,870	+				-0.1
5,415,050	+				-0.4
5,415,050	+				-2.1
5,415,051	-				+2.1
5,415,230	+		QEN71_RS24345	0.13	-1.4
5,415,231	-		QEN71_RS24345	0.13	-1.3
5,415,231	-		QEN71_RS24345	0.13	-0.1
5,415,231	-		QEN71_RS24345	0.13	+1.8
5,415,271	+		QEN71_RS24345	0.14	-0.3
5,415,271	+		QEN71_RS24345	0.14	-3.2
5,415,272	-		QEN71_RS24345	0.14	-0.1
5,415,272	-		QEN71_RS24345	0.14	-0.3
5,415,721	+		QEN71_RS24345	0.30	-0.2
5,415,722	-		QEN71_RS24345	0.30	-1.1
5,415,865	+		QEN71_RS24345	0.35	-0.5
5,415,865	+		QEN71_RS24345	0.35	+0.1
5,415,866	-		QEN71_RS24345	0.35	-1.1
5,415,866	-		QEN71_RS24345	0.35	+0.3
5,415,866	-		QEN71_RS24345	0.35	-0.2
5,415,925	+		QEN71_RS24345	0.37	-0.7
5,415,925	+		QEN71_RS24345	0.37	-0.5
5,415,926	-		QEN71_RS24345	0.37	+0.9
5,416,132	+		QEN71_RS24345	0.45	-0.9
5,416,132	+		QEN71_RS24345	0.45	+0.2
5,416,133	-		QEN71_RS24345	0.45	+0.8
5,416,133	-		QEN71_RS24345	0.45	-1.1
5,416,133	-		QEN71_RS24345	0.45	+0.4
5,416,249	+		QEN71_RS24345	0.49	-0.5
5,416,249	+		QEN71_RS24345	0.49	-0.2
5,416,249	+		QEN71_RS24345	0.49	-0.8
5,416,249	+		QEN71_RS24345	0.49	-0.5
5,416,249	+		QEN71_RS24345	0.49	-1.9
5,416,384	+		QEN71_RS24345	0.53	-0.9
5,416,384	+		QEN71_RS24345	0.53	+0.1
5,416,384	+		QEN71_RS24345	0.53	-1.1
5,416,385	-		QEN71_RS24345	0.53	+0.4
5,416,474	+		QEN71_RS24345	0.57	+0.4
5,416,474	+		QEN71_RS24345	0.57	-0.8
5,416,474	+		QEN71_RS24345	0.57	-0.9
5,416,811	+		QEN71_RS24345	0.68	-0.5
5,416,811	+		QEN71_RS24345	0.68	-0.4
5,416,812	-		QEN71_RS24345	0.68	+0.3
5,416,861	+		QEN71_RS24345	0.70	-1.1
5,416,861	+		QEN71_RS24345	0.70	-0.5
5,416,861	+		QEN71_RS24345	0.70	+0.1
5,416,861	+		QEN71_RS24345	0.70	-0.7
5,416,862	-		QEN71_RS24345	0.70	+1.7
5,416,862	-		QEN71_RS24345	0.70	+0.1
5,417,125	+		QEN71_RS24345	0.79	-0.7
5,417,125	+		QEN71_RS24345	0.79	-0.4
5,417,125	+		QEN71_RS24345	0.79	-0.8
5,417,125	+		QEN71_RS24345	0.79	+0.2
5,417,126	-		QEN71_RS24345	0.79	-1.0
5,417,126	-		QEN71_RS24345	0.79	+0.8
5,417,126	-		QEN71_RS24345	0.79	+0.5
5,417,126	-		QEN71_RS24345	0.79	-1.4
5,417,300	-		QEN71_RS24345	0.85	-0.2
5,417,329	+		QEN71_RS24345	0.86	+0.3
5,417,329	+		QEN71_RS24345	0.86	-0.1
5,417,330	-		QEN71_RS24345	0.87	-0.7
5,417,418	+		QEN71_RS24345	0.90	+0.5
5,417,419	-		QEN71_RS24345	0.90	+0.5
5,417,457	+				-0.2
5,417,538	+				-0.8
5,417,570	+				-0.8
5,417,599	+				-0.2
5,417,599	+				-0.4
5,417,599	+				+2.0
5,417,599	+				-0.1
5,417,599	+				-0.2
5,417,599	+				-0.5
5,417,600	-				-0.2
5,417,600	-				-0.2
5,417,600	-				-0.7
5,417,600	-				+0.3
5,417,600	-				+0.3
5,417,600	-				-0.8
5,417,600	-				+0.7
5,417,600	-				+0.1
5,417,600	-				-0.2
5,417,600	-				+0.4
5,417,600	-				-0.4
5,417,600	-				+0.5
5,417,600	-				+0.3
5,417,600	-				-0.2
5,417,744	-				-0.8
5,417,830	+				+0.2
5,417,830	+				-0.6
5,417,831	-				-1.1
5,418,129	-				+1.0
5,418,129	-				-0.3
5,418,129	-				-0.5
5,418,508	-		QEN71_RS24350	0.15	-0.2
5,418,508	-		QEN71_RS24350	0.15	+0.1
5,418,508	-		QEN71_RS24350	0.15	+0.2
5,418,510	-		QEN71_RS24350	0.16	-1.3
5,418,537	+		QEN71_RS24350	0.20	-2.9
5,418,537	+		QEN71_RS24350	0.20	+0.9
5,418,538	-		QEN71_RS24350	0.21	-0.2
5,418,538	-		QEN71_RS24350	0.21	+0.2
5,418,538	-		QEN71_RS24350	0.21	+0.1
5,418,578	+		QEN71_RS24350	0.27	+0.1
5,418,630	+		QEN71_RS24350	0.36	+0.1
5,418,630	+		QEN71_RS24350	0.36	+0.1
5,418,693	+		QEN71_RS24350	0.47	-1.2
5,418,693	+		QEN71_RS24350	0.47	-0.9
5,418,693	+		QEN71_RS24350	0.47	+1.7
5,418,693	+		QEN71_RS24350	0.47	+0.6
5,418,694	-		QEN71_RS24350	0.47	-1.1