Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS24230

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
5,390,598	+		QEN71_RS24225	0.72	-2.8
5,390,598	+		QEN71_RS24225	0.72	-0.5
5,390,599	-		QEN71_RS24225	0.72	-1.7
5,390,599	-		QEN71_RS24225	0.72	-3.4
5,390,599	-		QEN71_RS24225	0.72	-2.1
5,390,599	-		QEN71_RS24225	0.72	-3.5
5,390,686	+		QEN71_RS24225	0.77	-1.8
5,390,768	-		QEN71_RS24225	0.82	-4.2
5,390,769	+		QEN71_RS24225	0.82	-2.7
5,390,769	+		QEN71_RS24225	0.82	-3.2
5,390,769	+		QEN71_RS24225	0.82	-0.5
5,390,769	+		QEN71_RS24225	0.82	-1.9
5,390,769	+		QEN71_RS24225	0.82	-3.1
5,390,770	-		QEN71_RS24225	0.82	-3.9
5,390,770	-		QEN71_RS24225	0.82	-1.1
5,390,770	-		QEN71_RS24225	0.82	-3.3
5,390,770	-		QEN71_RS24225	0.82	-1.6
5,390,770	-		QEN71_RS24225	0.82	-4.5
5,390,770	-		QEN71_RS24225	0.82	-0.6
5,390,770	-		QEN71_RS24225	0.82	-0.2
5,390,770	-		QEN71_RS24225	0.82	-0.9
5,390,770	-		QEN71_RS24225	0.82	+1.7
5,390,770	-		QEN71_RS24225	0.82	-1.8
5,390,770	-		QEN71_RS24225	0.82	-0.2
5,390,770	-		QEN71_RS24225	0.82	-3.0
5,390,770	-		QEN71_RS24225	0.82	-4.9
5,390,856	+		QEN71_RS24225	0.87	-1.2
5,390,856	+		QEN71_RS24225	0.87	-3.2
5,390,857	-		QEN71_RS24225	0.87	-0.2
5,390,857	-		QEN71_RS24225	0.87	-2.8
5,390,857	-		QEN71_RS24225	0.87	-3.9
5,390,857	-		QEN71_RS24225	0.87	-4.6
5,390,857	-		QEN71_RS24225	0.87	-4.7
5,390,857	-		QEN71_RS24225	0.87	-2.8
5,390,857	-		QEN71_RS24225	0.87	-2.0
5,390,925	+				-2.7
5,390,925	+				-3.5
5,390,925	+				-0.6
5,390,926	-				-4.1
5,390,926	-				-3.0
5,390,926	-				-2.5
5,390,926	-				-1.1
5,390,926	-				-1.9
5,390,937	+				-3.7
5,390,937	+				+1.1
5,390,937	+				-3.2
5,390,938	-				-1.4
5,390,938	-				-2.6
5,390,938	-				-2.2
5,390,938	-				-1.5
5,390,938	-				-2.9
5,390,938	-				-3.4
5,390,938	-				-2.1
5,390,938	-				-3.5
5,390,943	+				-3.5
5,390,943	+				-0.2
5,390,943	+				-0.2
5,390,943	+				-2.9
5,390,943	+				-0.2
5,390,943	+				-1.9
5,390,943	+				-2.6
5,390,943	+				-3.8
5,390,943	+				-3.3
5,390,943	+				-2.4
5,390,943	+				-1.6
5,390,943	+				-0.7
5,390,943	+				-2.8
5,390,944	-				-2.8
5,390,944	-				-2.9
5,390,944	-				-1.8
5,390,944	-				-0.5
5,390,944	-				-3.4
5,390,944	-				-4.5
5,390,944	-				-3.3
5,390,944	-				-2.1
5,390,944	-				-3.4
5,390,944	-				-2.8
5,390,944	-				-2.1
5,390,944	-				-3.9
5,390,944	-				-0.7
5,390,944	-				-3.4
5,390,944	-				-1.2
5,390,944	-				-0.2
5,390,944	-				-1.8
5,390,944	-				-2.8
5,390,944	-				-2.6
5,390,949	-				-1.7
5,391,025	+				-2.2
5,391,026	-				-1.9
5,391,026	-				-2.1
5,391,026	-				-2.3
5,391,026	-				-1.1
5,391,026	-				-2.7
5,391,082	+				-2.9
5,391,082	+				-3.4
5,391,082	+				-1.7
5,391,082	+				-2.9
5,391,082	+				-0.7
5,391,082	+				-1.4
5,391,082	+				-4.3
5,391,082	+				-3.3
5,391,082	+				-0.9
5,391,083	-				-0.8
5,391,083	-				-3.7
5,391,083	-				-2.2
5,391,083	-				-2.6
5,391,083	-				-4.1
5,391,083	-				-2.1
5,391,083	-				-3.7
5,391,083	-				-4.3
5,391,083	-				-2.5
5,391,083	-				-3.5
5,391,219	+				-1.4
5,391,219	+				+1.1
5,391,219	+				-1.1
5,391,219	+				-1.2
5,391,219	+				-1.9
5,391,219	+				-1.0
5,391,219	+				-2.2
5,391,219	+				-0.2
5,391,219	+				-4.5
5,391,220	-				-0.2
5,391,220	-				+0.9
5,391,220	-				-1.2
5,391,220	-				-0.1
5,391,220	-				-0.1
5,391,220	-				-0.4
5,391,220	-				-0.6
5,391,220	-				-0.4
5,391,233	+				-2.1
5,391,233	+				-1.1
5,391,240	+				-3.3
5,391,240	+				-1.6
5,391,241	-				-0.4
5,391,241	-				-0.1
5,391,241	-				-0.2
5,391,244	+				-4.1
5,391,244	+				-4.5
5,391,244	+				-1.3
5,391,244	+				-3.6
5,391,244	+				-2.2
5,391,244	+				-1.1
5,391,244	+				-3.9
5,391,244	+				+1.4
5,391,244	+				-1.7
5,391,244	+				-0.5
5,391,245	-				+1.3
5,391,245	-				+0.2
5,391,245	-				+0.7
5,391,245	-				-1.6
5,391,245	-				-0.9
5,391,245	-				+0.4
5,391,245	-				-1.2
5,391,245	-				-1.6
5,391,249	+				-1.7
5,391,250	-				-0.4
5,391,250	-				+0.1
5,391,250	-				+0.6
5,391,250	-				+2.1
5,391,250	-				-1.9
5,391,270	+				+0.4
5,391,271	-				-0.1
5,391,361	+				-0.3
5,391,361	+				+1.3
5,391,361	+				-2.2
5,391,362	-				-0.2
5,391,362	-				-0.2
5,391,362	-				-0.3
5,391,362	-				+0.1
5,391,362	-				-0.1
5,391,369	+				-0.8
5,391,369	+				+2.0
5,391,369	+				+1.1
5,391,369	+				-1.0
5,391,369	+				+0.2
5,391,370	-				+0.1
5,391,370	-				-0.7
5,391,370	-				+0.3
5,391,370	-				+0.4
5,391,370	-				-0.9
5,391,428	+				-1.0
5,391,429	-				+2.9
5,391,429	-				+0.6
5,391,429	-				-1.5
5,391,444	+				+0.8
5,391,444	+				-0.8
5,391,566	+		QEN71_RS24230	0.12	-0.1
5,391,566	+		QEN71_RS24230	0.12	+0.0
5,391,566	+		QEN71_RS24230	0.12	+0.9
5,391,567	-		QEN71_RS24230	0.12	-0.8
5,391,567	-		QEN71_RS24230	0.12	-0.3
5,391,635	+		QEN71_RS24230	0.24	-0.9
5,391,636	-		QEN71_RS24230	0.25	-0.1
5,391,679	+		QEN71_RS24230	0.32	+0.6
5,391,679	+		QEN71_RS24230	0.32	+0.7
5,391,679	+		QEN71_RS24230	0.32	+0.6
5,391,680	-		QEN71_RS24230	0.32	+1.2
5,391,680	-		QEN71_RS24230	0.32	-0.9
5,391,680	-		QEN71_RS24230	0.32	-0.4
5,391,680	-		QEN71_RS24230	0.32	-0.2
5,391,680	-		QEN71_RS24230	0.32	+0.2
5,391,680	-		QEN71_RS24230	0.32	+0.0
5,391,680	-		QEN71_RS24230	0.32	+0.0
5,391,680	-		QEN71_RS24230	0.32	-1.2
5,391,680	-		QEN71_RS24230	0.32	-0.2
5,391,704	+		QEN71_RS24230	0.37	+0.8
5,391,704	+		QEN71_RS24230	0.37	-0.4
5,391,704	+		QEN71_RS24230	0.37	+1.0
5,391,705	-		QEN71_RS24230	0.37	-1.1
5,391,705	-		QEN71_RS24230	0.37	+0.1
5,391,705	-		QEN71_RS24230	0.37	-1.8
5,391,705	-		QEN71_RS24230	0.37	-1.3
5,391,705	-		QEN71_RS24230	0.37	-1.3
5,391,929	+		QEN71_RS24230	0.77	+0.7
5,391,940	+		QEN71_RS24230	0.79	-0.7
5,391,940	+		QEN71_RS24230	0.79	-1.7
5,391,940	+		QEN71_RS24230	0.79	+0.8
5,391,940	+		QEN71_RS24230	0.79	-0.1
5,391,940	+		QEN71_RS24230	0.79	+0.8
5,391,940	+		QEN71_RS24230	0.79	-0.3
5,391,940	+		QEN71_RS24230	0.79	+0.8
5,391,940	+		QEN71_RS24230	0.79	-1.1
5,391,940	+		QEN71_RS24230	0.79	+0.7
5,391,940	+		QEN71_RS24230	0.79	+1.7
5,391,940	+		QEN71_RS24230	0.79	+0.1
5,391,940	+		QEN71_RS24230	0.79	-0.6
5,391,940	+		QEN71_RS24230	0.79	-0.5
5,391,940	+		QEN71_RS24230	0.79	-0.1
5,391,940	+		QEN71_RS24230	0.79	-1.1
5,391,941	-		QEN71_RS24230	0.79	+0.3
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	+0.1
5,391,941	-		QEN71_RS24230	0.79	+0.6
5,391,941	-		QEN71_RS24230	0.79	-0.9
5,391,941	-		QEN71_RS24230	0.79	-0.4
5,391,941	-		QEN71_RS24230	0.79	-1.0
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	-0.1
5,391,941	-		QEN71_RS24230	0.79	-1.5
5,391,941	-		QEN71_RS24230	0.79	-0.1
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	-0.3
5,391,941	-		QEN71_RS24230	0.79	-1.9
5,391,941	-		QEN71_RS24230	0.79	+0.1
5,391,941	-		QEN71_RS24230	0.79	+1.5
5,391,941	-		QEN71_RS24230	0.79	-1.5
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	+0.0
5,392,056	+				+0.9
5,392,056	+				+0.4
5,392,056	+				-0.4
5,392,056	+				-0.8
5,392,056	+				-1.2
5,392,057	-				-0.0
5,392,135	-		QEN71_RS24235	0.18	-0.2
5,392,135	-		QEN71_RS24235	0.18	-0.2
5,392,135	-		QEN71_RS24235	0.18	-0.8
5,392,146	+		QEN71_RS24235	0.21	-1.8
5,392,441	+		QEN71_RS24235	0.89	+0.1
5,392,442	-		QEN71_RS24235	0.89	+0.1
5,392,442	-		QEN71_RS24235	0.89	-0.5
5,392,466	-				-1.7
5,392,466	-				-0.6
5,392,466	-				-1.5
5,392,512	+				-1.2
5,392,512	+				-0.9
5,392,512	+				-0.7
5,392,512	+				-1.9
5,392,512	+				-1.4
5,392,513	-				-2.0
5,392,513	-				-0.4
5,392,513	-				-0.9
5,392,578	+				-1.0
5,392,578	+				-1.1
5,392,578	+				-1.0
5,392,578	+				-3.8
5,392,579	-				+0.1
5,392,579	-				+0.7
5,392,911	+		QEN71_RS24240	0.53	-2.3
5,392,911	+		QEN71_RS24240	0.53	-0.7
5,392,911	+		QEN71_RS24240	0.53	-1.5
5,392,911	+		QEN71_RS24240	0.53	-2.7
5,392,911	+		QEN71_RS24240	0.53	-2.3
5,392,911	+		QEN71_RS24240	0.53	-3.0
5,392,911	+		QEN71_RS24240	0.53	-1.1
5,392,912	-		QEN71_RS24240	0.53	+0.3
5,392,912	-		QEN71_RS24240	0.53	-0.6
5,392,912	-		QEN71_RS24240	0.53	-1.5
5,392,912	-		QEN71_RS24240	0.53	-2.1
5,392,912	-		QEN71_RS24240	0.53	-1.9
5,392,912	-		QEN71_RS24240	0.53	-2.4
5,392,912	-		QEN71_RS24240	0.53	-2.1
5,392,912	-		QEN71_RS24240	0.53	-1.8
5,392,965	+		QEN71_RS24240	0.60	-0.0