Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS24225

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
5,388,357	+		QEN71_RS24215	0.74	-0.7
5,388,552	+				-2.6
5,388,552	+				-2.9
5,388,553	-				-4.8
5,388,609	+				-1.2
5,388,610	-				-0.2
5,388,667	+				-1.6
5,388,667	+				-2.1
5,388,667	+				-1.5
5,388,667	+				-3.0
5,388,667	+				-3.1
5,388,667	+				-1.2
5,388,667	+				-1.6
5,388,667	+				-1.4
5,388,667	+				-1.2
5,388,667	+				-0.5
5,388,667	+				-3.6
5,388,667	+				-2.9
5,388,667	+				-1.6
5,388,667	+				-2.2
5,388,667	+				-3.0
5,388,667	+				-1.4
5,388,667	+				-2.8
5,388,667	+				-2.1
5,388,668	-				-0.3
5,388,668	-				-1.2
5,388,668	-				+0.2
5,388,668	-				-0.1
5,388,668	-				+0.2
5,388,668	-				-0.2
5,388,668	-				+0.3
5,388,668	-				+0.1
5,388,668	-				-0.1
5,388,668	-				-0.4
5,388,668	-				-0.0
5,388,668	-				+0.2
5,388,668	-				-1.4
5,388,668	-				-1.7
5,388,668	-				-1.9
5,388,668	-				-1.8
5,388,855	+		QEN71_RS24220	0.27	+1.4
5,388,856	-		QEN71_RS24220	0.27	-2.9
5,388,856	-		QEN71_RS24220	0.27	-1.1
5,388,856	-		QEN71_RS24220	0.27	-1.0
5,388,896	-		QEN71_RS24220	0.35	-2.1
5,389,131	+		QEN71_RS24220	0.83	-0.2
5,389,131	+		QEN71_RS24220	0.83	+0.1
5,389,132	-		QEN71_RS24220	0.83	-1.9
5,389,132	-		QEN71_RS24220	0.83	-2.1
5,389,132	-		QEN71_RS24220	0.83	-2.9
5,389,132	-		QEN71_RS24220	0.83	-0.3
5,389,238	+				-1.6
5,389,238	+				-2.2
5,389,238	+				-2.4
5,389,238	+				-0.7
5,389,239	-				-1.0
5,389,239	-				-0.2
5,389,239	-				+0.5
5,389,239	-				-1.5
5,389,239	-				-0.4
5,389,239	-				-0.1
5,389,239	-				-1.1
5,389,239	-				-1.2
5,389,327	-				-1.1
5,389,328	+				-3.2
5,389,328	+				-0.4
5,389,328	+				-1.3
5,389,328	+				-2.2
5,389,328	+				-1.2
5,389,329	-				+0.6
5,389,329	-				-0.6
5,389,329	-				-0.7
5,389,329	-				+0.7
5,389,329	-				+1.5
5,389,329	-				+0.2
5,389,329	-				-0.5
5,389,329	-				+0.3
5,389,329	-				-0.7
5,389,510	-		QEN71_RS24225	0.10	-1.9
5,389,551	+		QEN71_RS24225	0.13	-1.5
5,389,551	+		QEN71_RS24225	0.13	+0.1
5,389,552	-		QEN71_RS24225	0.13	-4.5
5,389,552	-		QEN71_RS24225	0.13	-2.8
5,389,552	-		QEN71_RS24225	0.13	-3.9
5,389,552	-		QEN71_RS24225	0.13	-0.9
5,389,552	-		QEN71_RS24225	0.13	-1.6
5,389,552	-		QEN71_RS24225	0.13	-3.1
5,389,552	-		QEN71_RS24225	0.13	-2.5
5,389,552	-		QEN71_RS24225	0.13	-1.8
5,389,552	-		QEN71_RS24225	0.13	-3.9
5,389,552	-		QEN71_RS24225	0.13	-1.9
5,389,552	-		QEN71_RS24225	0.13	-2.7
5,389,552	-		QEN71_RS24225	0.13	+0.1
5,389,563	+		QEN71_RS24225	0.13	-3.1
5,389,575	+		QEN71_RS24225	0.14	-1.4
5,389,576	-		QEN71_RS24225	0.14	-2.4
5,389,576	-		QEN71_RS24225	0.14	-3.2
5,389,576	-		QEN71_RS24225	0.14	-3.7
5,389,576	-		QEN71_RS24225	0.14	-2.7
5,389,576	-		QEN71_RS24225	0.14	-2.1
5,389,576	-		QEN71_RS24225	0.14	-2.4
5,389,650	+		QEN71_RS24225	0.18	-2.0
5,389,650	+		QEN71_RS24225	0.18	-0.1
5,389,650	+		QEN71_RS24225	0.18	-2.9
5,389,651	-		QEN71_RS24225	0.18	-3.0
5,389,651	-		QEN71_RS24225	0.18	-3.9
5,389,709	-		QEN71_RS24225	0.22	-1.1
5,389,709	-		QEN71_RS24225	0.22	-1.7
5,389,709	-		QEN71_RS24225	0.22	-1.0
5,389,709	-		QEN71_RS24225	0.22	-0.4
5,389,825	-		QEN71_RS24225	0.28	-3.0
5,389,914	+		QEN71_RS24225	0.33	-1.4
5,389,915	-		QEN71_RS24225	0.33	-1.8
5,389,915	-		QEN71_RS24225	0.33	-0.2
5,389,915	-		QEN71_RS24225	0.33	-1.7
5,390,253	+		QEN71_RS24225	0.53	-0.9
5,390,253	+		QEN71_RS24225	0.53	+0.1
5,390,409	+		QEN71_RS24225	0.61	-3.1
5,390,409	+		QEN71_RS24225	0.61	-1.2
5,390,409	+		QEN71_RS24225	0.61	+0.1
5,390,409	+		QEN71_RS24225	0.61	-2.2
5,390,409	+		QEN71_RS24225	0.61	-2.9
5,390,409	+		QEN71_RS24225	0.61	-2.5
5,390,409	+		QEN71_RS24225	0.61	+0.2
5,390,409	+		QEN71_RS24225	0.61	+0.1
5,390,409	+		QEN71_RS24225	0.61	+0.1
5,390,409	+		QEN71_RS24225	0.61	-4.3
5,390,409	+		QEN71_RS24225	0.61	-2.9
5,390,410	-		QEN71_RS24225	0.62	-4.0
5,390,410	-		QEN71_RS24225	0.62	-3.1
5,390,410	-		QEN71_RS24225	0.62	-3.5
5,390,410	-		QEN71_RS24225	0.62	-2.8
5,390,410	-		QEN71_RS24225	0.62	-0.6
5,390,410	-		QEN71_RS24225	0.62	-3.5
5,390,410	-		QEN71_RS24225	0.62	-0.9
5,390,410	-		QEN71_RS24225	0.62	-0.2
5,390,410	-		QEN71_RS24225	0.62	-4.4
5,390,410	-		QEN71_RS24225	0.62	-3.9
5,390,410	-		QEN71_RS24225	0.62	-1.9
5,390,410	-		QEN71_RS24225	0.62	-5.0
5,390,410	-		QEN71_RS24225	0.62	-0.9
5,390,410	-		QEN71_RS24225	0.62	-2.3
5,390,410	-		QEN71_RS24225	0.62	-4.4
5,390,410	-		QEN71_RS24225	0.62	+0.5
5,390,410	-		QEN71_RS24225	0.62	-1.4
5,390,410	-		QEN71_RS24225	0.62	-3.9
5,390,410	-		QEN71_RS24225	0.62	-4.4
5,390,410	-		QEN71_RS24225	0.62	-2.1
5,390,410	-		QEN71_RS24225	0.62	-3.5
5,390,410	-		QEN71_RS24225	0.62	-1.7
5,390,410	-		QEN71_RS24225	0.62	-4.1
5,390,410	-		QEN71_RS24225	0.62	-1.1
5,390,410	-		QEN71_RS24225	0.62	-2.0
5,390,410	-		QEN71_RS24225	0.62	-3.1
5,390,410	-		QEN71_RS24225	0.62	-3.4
5,390,415	+		QEN71_RS24225	0.62	-4.3
5,390,415	+		QEN71_RS24225	0.62	-2.8
5,390,415	+		QEN71_RS24225	0.62	-0.9
5,390,415	+		QEN71_RS24225	0.62	-2.8
5,390,415	+		QEN71_RS24225	0.62	-2.7
5,390,416	-		QEN71_RS24225	0.62	-2.6
5,390,416	-		QEN71_RS24225	0.62	+0.1
5,390,416	-		QEN71_RS24225	0.62	-0.9
5,390,416	-		QEN71_RS24225	0.62	+0.3
5,390,490	+		QEN71_RS24225	0.66	-1.5
5,390,491	-		QEN71_RS24225	0.66	-1.9
5,390,491	-		QEN71_RS24225	0.66	-3.5
5,390,598	+		QEN71_RS24225	0.72	-2.8
5,390,598	+		QEN71_RS24225	0.72	-0.5
5,390,599	-		QEN71_RS24225	0.72	-1.7
5,390,599	-		QEN71_RS24225	0.72	-3.4
5,390,599	-		QEN71_RS24225	0.72	-2.1
5,390,599	-		QEN71_RS24225	0.72	-3.5
5,390,686	+		QEN71_RS24225	0.77	-1.8
5,390,768	-		QEN71_RS24225	0.82	-4.2
5,390,769	+		QEN71_RS24225	0.82	-2.7
5,390,769	+		QEN71_RS24225	0.82	-3.2
5,390,769	+		QEN71_RS24225	0.82	-0.5
5,390,769	+		QEN71_RS24225	0.82	-1.9
5,390,769	+		QEN71_RS24225	0.82	-3.1
5,390,770	-		QEN71_RS24225	0.82	-3.9
5,390,770	-		QEN71_RS24225	0.82	-1.1
5,390,770	-		QEN71_RS24225	0.82	-3.3
5,390,770	-		QEN71_RS24225	0.82	-1.6
5,390,770	-		QEN71_RS24225	0.82	-4.5
5,390,770	-		QEN71_RS24225	0.82	-0.6
5,390,770	-		QEN71_RS24225	0.82	-0.2
5,390,770	-		QEN71_RS24225	0.82	-0.9
5,390,770	-		QEN71_RS24225	0.82	+1.7
5,390,770	-		QEN71_RS24225	0.82	-1.8
5,390,770	-		QEN71_RS24225	0.82	-0.2
5,390,770	-		QEN71_RS24225	0.82	-3.0
5,390,770	-		QEN71_RS24225	0.82	-4.9
5,390,856	+		QEN71_RS24225	0.87	-1.2
5,390,856	+		QEN71_RS24225	0.87	-3.2
5,390,857	-		QEN71_RS24225	0.87	-0.2
5,390,857	-		QEN71_RS24225	0.87	-2.8
5,390,857	-		QEN71_RS24225	0.87	-3.9
5,390,857	-		QEN71_RS24225	0.87	-4.6
5,390,857	-		QEN71_RS24225	0.87	-4.7
5,390,857	-		QEN71_RS24225	0.87	-2.8
5,390,857	-		QEN71_RS24225	0.87	-2.0
5,390,925	+				-2.7
5,390,925	+				-3.5
5,390,925	+				-0.6
5,390,926	-				-4.1
5,390,926	-				-3.0
5,390,926	-				-2.5
5,390,926	-				-1.1
5,390,926	-				-1.9
5,390,937	+				-3.7
5,390,937	+				+1.1
5,390,937	+				-3.2
5,390,938	-				-1.4
5,390,938	-				-2.6
5,390,938	-				-2.2
5,390,938	-				-1.5
5,390,938	-				-2.9
5,390,938	-				-3.4
5,390,938	-				-2.1
5,390,938	-				-3.5
5,390,943	+				-3.5
5,390,943	+				-0.2
5,390,943	+				-0.2
5,390,943	+				-2.9
5,390,943	+				-0.2
5,390,943	+				-1.9
5,390,943	+				-2.6
5,390,943	+				-3.8
5,390,943	+				-3.3
5,390,943	+				-2.4
5,390,943	+				-1.6
5,390,943	+				-0.7
5,390,943	+				-2.8
5,390,944	-				-2.8
5,390,944	-				-2.9
5,390,944	-				-1.8
5,390,944	-				-0.5
5,390,944	-				-3.4
5,390,944	-				-4.5
5,390,944	-				-3.3
5,390,944	-				-2.1
5,390,944	-				-3.4
5,390,944	-				-2.8
5,390,944	-				-2.1
5,390,944	-				-3.9
5,390,944	-				-0.7
5,390,944	-				-3.4
5,390,944	-				-1.2
5,390,944	-				-0.2
5,390,944	-				-1.8
5,390,944	-				-2.8
5,390,944	-				-2.6
5,390,949	-				-1.7
5,391,025	+				-2.2
5,391,026	-				-1.9
5,391,026	-				-2.1
5,391,026	-				-2.3
5,391,026	-				-1.1
5,391,026	-				-2.7
5,391,082	+				-2.9
5,391,082	+				-3.4
5,391,082	+				-1.7
5,391,082	+				-2.9
5,391,082	+				-0.7
5,391,082	+				-1.4
5,391,082	+				-4.3
5,391,082	+				-3.3
5,391,082	+				-0.9
5,391,083	-				-0.8
5,391,083	-				-3.7
5,391,083	-				-2.2
5,391,083	-				-2.6
5,391,083	-				-4.1
5,391,083	-				-2.1
5,391,083	-				-3.7
5,391,083	-				-4.3
5,391,083	-				-2.5
5,391,083	-				-3.5
5,391,219	+				-1.4
5,391,219	+				+1.1
5,391,219	+				-1.1
5,391,219	+				-1.2
5,391,219	+				-1.9
5,391,219	+				-1.0
5,391,219	+				-2.2
5,391,219	+				-0.2
5,391,219	+				-4.5
5,391,220	-				-0.2
5,391,220	-				+0.9
5,391,220	-				-1.2
5,391,220	-				-0.1
5,391,220	-				-0.1
5,391,220	-				-0.4
5,391,220	-				-0.6
5,391,220	-				-0.4
5,391,233	+				-2.1
5,391,233	+				-1.1
5,391,240	+				-3.3
5,391,240	+				-1.6
5,391,241	-				-0.4
5,391,241	-				-0.1
5,391,241	-				-0.2
5,391,244	+				-4.1
5,391,244	+				-4.5
5,391,244	+				-1.3
5,391,244	+				-3.6
5,391,244	+				-2.2
5,391,244	+				-1.1
5,391,244	+				-3.9
5,391,244	+				+1.4
5,391,244	+				-1.7
5,391,244	+				-0.5
5,391,245	-				+1.3
5,391,245	-				+0.2
5,391,245	-				+0.7
5,391,245	-				-1.6
5,391,245	-				-0.9
5,391,245	-				+0.4
5,391,245	-				-1.2
5,391,245	-				-1.6
5,391,249	+				-1.7
5,391,250	-				-0.4
5,391,250	-				+0.1
5,391,250	-				+0.6
5,391,250	-				+2.1
5,391,250	-				-1.9
5,391,270	+				+0.4
5,391,271	-				-0.1
5,391,361	+				-0.3
5,391,361	+				+1.3
5,391,361	+				-2.2
5,391,362	-				-0.2
5,391,362	-				-0.2
5,391,362	-				-0.3
5,391,362	-				+0.1
5,391,362	-				-0.1
5,391,369	+				-0.8
5,391,369	+				+2.0
5,391,369	+				+1.1
5,391,369	+				-1.0
5,391,369	+				+0.2
5,391,370	-				+0.1
5,391,370	-				-0.7
5,391,370	-				+0.3
5,391,370	-				+0.4
5,391,370	-				-0.9
5,391,428	+				-1.0
5,391,429	-				+2.9
5,391,429	-				+0.6
5,391,429	-				-1.5
5,391,444	+				+0.8
5,391,444	+				-0.8
5,391,566	+		QEN71_RS24230	0.12	-0.1
5,391,566	+		QEN71_RS24230	0.12	+0.0
5,391,566	+		QEN71_RS24230	0.12	+0.9
5,391,567	-		QEN71_RS24230	0.12	-0.8
5,391,567	-		QEN71_RS24230	0.12	-0.3
5,391,635	+		QEN71_RS24230	0.24	-0.9
5,391,636	-		QEN71_RS24230	0.25	-0.1
5,391,679	+		QEN71_RS24230	0.32	+0.6
5,391,679	+		QEN71_RS24230	0.32	+0.7
5,391,679	+		QEN71_RS24230	0.32	+0.6
5,391,680	-		QEN71_RS24230	0.32	+1.2
5,391,680	-		QEN71_RS24230	0.32	-0.9
5,391,680	-		QEN71_RS24230	0.32	-0.4
5,391,680	-		QEN71_RS24230	0.32	-0.2
5,391,680	-		QEN71_RS24230	0.32	+0.2
5,391,680	-		QEN71_RS24230	0.32	+0.0
5,391,680	-		QEN71_RS24230	0.32	+0.0
5,391,680	-		QEN71_RS24230	0.32	-1.2
5,391,680	-		QEN71_RS24230	0.32	-0.2
5,391,704	+		QEN71_RS24230	0.37	+0.8
5,391,704	+		QEN71_RS24230	0.37	-0.4
5,391,704	+		QEN71_RS24230	0.37	+1.0
5,391,705	-		QEN71_RS24230	0.37	-1.1
5,391,705	-		QEN71_RS24230	0.37	+0.1
5,391,705	-		QEN71_RS24230	0.37	-1.8
5,391,705	-		QEN71_RS24230	0.37	-1.3
5,391,705	-		QEN71_RS24230	0.37	-1.3
5,391,929	+		QEN71_RS24230	0.77	+0.7
5,391,940	+		QEN71_RS24230	0.79	-0.7
5,391,940	+		QEN71_RS24230	0.79	-1.7
5,391,940	+		QEN71_RS24230	0.79	+0.8
5,391,940	+		QEN71_RS24230	0.79	-0.1
5,391,940	+		QEN71_RS24230	0.79	+0.8
5,391,940	+		QEN71_RS24230	0.79	-0.3
5,391,940	+		QEN71_RS24230	0.79	+0.8
5,391,940	+		QEN71_RS24230	0.79	-1.1
5,391,940	+		QEN71_RS24230	0.79	+0.7
5,391,940	+		QEN71_RS24230	0.79	+1.7
5,391,940	+		QEN71_RS24230	0.79	+0.1
5,391,940	+		QEN71_RS24230	0.79	-0.6
5,391,940	+		QEN71_RS24230	0.79	-0.5
5,391,940	+		QEN71_RS24230	0.79	-0.1
5,391,940	+		QEN71_RS24230	0.79	-1.1
5,391,941	-		QEN71_RS24230	0.79	+0.3
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	+0.1
5,391,941	-		QEN71_RS24230	0.79	+0.6
5,391,941	-		QEN71_RS24230	0.79	-0.9
5,391,941	-		QEN71_RS24230	0.79	-0.4
5,391,941	-		QEN71_RS24230	0.79	-1.0
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	-0.1
5,391,941	-		QEN71_RS24230	0.79	-1.5
5,391,941	-		QEN71_RS24230	0.79	-0.1
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	-0.3
5,391,941	-		QEN71_RS24230	0.79	-1.9
5,391,941	-		QEN71_RS24230	0.79	+0.1
5,391,941	-		QEN71_RS24230	0.79	+1.5
5,391,941	-		QEN71_RS24230	0.79	-1.5
5,391,941	-		QEN71_RS24230	0.79	-0.6
5,391,941	-		QEN71_RS24230	0.79	+0.0
5,392,056	+				+0.9
5,392,056	+				+0.4
5,392,056	+				-0.4
5,392,056	+				-0.8
5,392,056	+				-1.2
5,392,057	-				-0.0