Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS22485 and QEN71_RS22490 are separated by 174 nucleotides QEN71_RS22490 and QEN71_RS22495 are separated by 27 nucleotides QEN71_RS22495 and QEN71_RS22500 are separated by 2 nucleotides QEN71_RS22500 and QEN71_RS22505 are separated by 76 nucleotides
QEN71_RS22485: QEN71_RS22485 - replicative DNA helicase, at 4,996,797 to 4,998,185
_RS22485
QEN71_RS22490: QEN71_RS22490 - 50S ribosomal protein L9, at 4,998,360 to 4,998,812
_RS22490
QEN71_RS22495: QEN71_RS22495 - 30S ribosomal protein S18, at 4,998,840 to 4,999,115
_RS22495
QEN71_RS22500: QEN71_RS22500 - primosomal replication protein N, at 4,999,118 to 4,999,417
_RS22500
QEN71_RS22505: QEN71_RS22505 - 30S ribosomal protein S6, at 4,999,494 to 4,999,868
_RS22505
Position (kb)
4998
4999 Strain fitness (log2 ratio)
-1
0
1 at 4998.197 kb on - strand at 4998.208 kb on - strand at 4998.208 kb on - strand at 4998.208 kb on - strand at 4998.208 kb on - strand at 4998.208 kb on - strand at 4998.222 kb on - strand at 4998.222 kb on - strand at 4998.222 kb on - strand at 4998.253 kb on + strand at 4998.253 kb on + strand at 4998.253 kb on + strand at 4998.253 kb on + strand at 4998.253 kb on + strand at 4998.254 kb on - strand at 4998.361 kb on + strand at 4998.362 kb on - strand at 4998.362 kb on - strand at 4998.362 kb on - strand at 4998.732 kb on - strand, within QEN71_RS22490 at 4998.732 kb on - strand, within QEN71_RS22490 at 4998.732 kb on - strand, within QEN71_RS22490 at 4998.732 kb on - strand, within QEN71_RS22490 at 4998.842 kb on - strand at 4998.863 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,998,197 - +0.1 4,998,208 - -0.7 4,998,208 - -0.8 4,998,208 - -0.9 4,998,208 - -0.4 4,998,208 - -0.5 4,998,222 - +0.7 4,998,222 - +0.7 4,998,222 - -0.2 4,998,253 + +0.6 4,998,253 + +0.0 4,998,253 + -0.2 4,998,253 + +0.6 4,998,253 + -0.6 4,998,254 - +0.5 4,998,361 + -0.4 4,998,362 - +1.0 4,998,362 - +0.0 4,998,362 - +0.4 4,998,732 - QEN71_RS22490 0.82 -0.5 4,998,732 - QEN71_RS22490 0.82 -1.1 4,998,732 - QEN71_RS22490 0.82 -0.5 4,998,732 - QEN71_RS22490 0.82 -1.1 4,998,842 - -0.9 4,998,863 - -0.9
Or see this region's nucleotide sequence