Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS22395 and QEN71_RS22400 are separated by 697 nucleotides QEN71_RS22400 and QEN71_RS22405 are separated by 30 nucleotides
QEN71_RS22395: QEN71_RS22395 - molybdopterin molybdotransferase MoeA, at 4,975,011 to 4,976,231
_RS22395
QEN71_RS22400: QEN71_RS22400 - threonine synthase, at 4,976,929 to 4,978,377
_RS22400
QEN71_RS22405: QEN71_RS22405 - homoserine dehydrogenase, at 4,978,408 to 4,979,739
_RS22405
Position (kb)
4976
4977
4978
4979 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4976.326 kb on + strand at 4976.326 kb on + strand at 4976.327 kb on - strand at 4976.499 kb on + strand at 4976.499 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.596 kb on + strand at 4976.622 kb on + strand at 4976.622 kb on + strand at 4976.622 kb on + strand at 4976.622 kb on + strand at 4976.622 kb on + strand at 4976.622 kb on + strand at 4976.622 kb on + strand at 4976.623 kb on - strand at 4976.623 kb on - strand at 4976.623 kb on - strand at 4976.623 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.658 kb on - strand at 4976.937 kb on + strand at 4976.937 kb on + strand at 4976.938 kb on - strand at 4976.938 kb on - strand at 4976.938 kb on - strand at 4976.938 kb on - strand at 4976.938 kb on - strand at 4977.160 kb on - strand, within QEN71_RS22400 at 4977.165 kb on + strand, within QEN71_RS22400 at 4977.166 kb on - strand, within QEN71_RS22400 at 4977.207 kb on + strand, within QEN71_RS22400 at 4977.231 kb on + strand, within QEN71_RS22400 at 4977.232 kb on - strand, within QEN71_RS22400 at 4977.422 kb on + strand, within QEN71_RS22400 at 4977.422 kb on + strand, within QEN71_RS22400 at 4977.422 kb on + strand, within QEN71_RS22400 at 4977.422 kb on + strand, within QEN71_RS22400 at 4977.422 kb on + strand, within QEN71_RS22400 at 4977.422 kb on + strand, within QEN71_RS22400 at 4977.423 kb on - strand, within QEN71_RS22400 at 4977.423 kb on - strand, within QEN71_RS22400 at 4977.423 kb on - strand, within QEN71_RS22400 at 4977.449 kb on + strand, within QEN71_RS22400 at 4977.449 kb on + strand, within QEN71_RS22400 at 4977.449 kb on + strand, within QEN71_RS22400 at 4977.624 kb on - strand, within QEN71_RS22400 at 4977.636 kb on - strand, within QEN71_RS22400 at 4977.636 kb on - strand, within QEN71_RS22400 at 4977.636 kb on - strand, within QEN71_RS22400 at 4977.636 kb on - strand, within QEN71_RS22400 at 4977.638 kb on + strand, within QEN71_RS22400 at 4977.638 kb on + strand, within QEN71_RS22400 at 4977.638 kb on + strand, within QEN71_RS22400 at 4977.639 kb on - strand, within QEN71_RS22400 at 4977.639 kb on - strand, within QEN71_RS22400 at 4977.639 kb on - strand, within QEN71_RS22400 at 4977.639 kb on - strand, within QEN71_RS22400 at 4977.639 kb on - strand, within QEN71_RS22400 at 4977.639 kb on - strand, within QEN71_RS22400 at 4977.803 kb on + strand, within QEN71_RS22400 at 4977.804 kb on - strand, within QEN71_RS22400 at 4977.804 kb on - strand, within QEN71_RS22400 at 4977.804 kb on - strand, within QEN71_RS22400 at 4977.962 kb on + strand, within QEN71_RS22400 at 4978.121 kb on + strand, within QEN71_RS22400 at 4978.121 kb on + strand, within QEN71_RS22400 at 4978.121 kb on + strand, within QEN71_RS22400 at 4978.122 kb on - strand, within QEN71_RS22400 at 4978.122 kb on - strand, within QEN71_RS22400 at 4978.122 kb on - strand, within QEN71_RS22400 at 4978.136 kb on + strand, within QEN71_RS22400 at 4978.136 kb on + strand, within QEN71_RS22400 at 4978.136 kb on + strand, within QEN71_RS22400 at 4978.137 kb on - strand, within QEN71_RS22400 at 4978.137 kb on - strand, within QEN71_RS22400 at 4978.137 kb on - strand, within QEN71_RS22400 at 4978.221 kb on - strand, within QEN71_RS22400 at 4978.262 kb on + strand at 4978.268 kb on + strand at 4978.283 kb on + strand at 4978.283 kb on + strand at 4978.332 kb on + strand at 4978.332 kb on + strand at 4978.332 kb on + strand at 4978.332 kb on + strand at 4978.333 kb on - strand at 4978.370 kb on + strand at 4978.370 kb on + strand at 4978.370 kb on + strand at 4978.371 kb on - strand at 4978.371 kb on - strand at 4978.391 kb on + strand at 4978.391 kb on + strand at 4978.391 kb on + strand at 4978.391 kb on + strand at 4978.392 kb on - strand at 4978.392 kb on - strand at 4978.392 kb on - strand at 4978.392 kb on - strand at 4978.392 kb on - strand at 4978.392 kb on - strand at 4978.392 kb on - strand at 4978.614 kb on + strand, within QEN71_RS22405 at 4978.614 kb on + strand, within QEN71_RS22405 at 4978.615 kb on - strand, within QEN71_RS22405 at 4978.615 kb on - strand, within QEN71_RS22405 at 4978.667 kb on + strand, within QEN71_RS22405 at 4978.667 kb on + strand, within QEN71_RS22405 at 4978.667 kb on + strand, within QEN71_RS22405 at 4978.667 kb on + strand, within QEN71_RS22405 at 4978.667 kb on + strand, within QEN71_RS22405 at 4978.668 kb on - strand, within QEN71_RS22405 at 4978.668 kb on - strand, within QEN71_RS22405 at 4978.668 kb on - strand, within QEN71_RS22405 at 4978.668 kb on - strand, within QEN71_RS22405 at 4978.668 kb on - strand, within QEN71_RS22405 at 4978.668 kb on - strand, within QEN71_RS22405 at 4978.668 kb on - strand, within QEN71_RS22405 at 4978.670 kb on + strand, within QEN71_RS22405 at 4978.670 kb on + strand, within QEN71_RS22405 at 4978.671 kb on - strand, within QEN71_RS22405 at 4978.767 kb on + strand, within QEN71_RS22405 at 4978.767 kb on + strand, within QEN71_RS22405 at 4978.767 kb on + strand, within QEN71_RS22405 at 4978.768 kb on - strand, within QEN71_RS22405 at 4978.842 kb on - strand, within QEN71_RS22405 at 4978.842 kb on - strand, within QEN71_RS22405 at 4978.844 kb on + strand, within QEN71_RS22405 at 4978.844 kb on + strand, within QEN71_RS22405 at 4978.844 kb on + strand, within QEN71_RS22405 at 4978.845 kb on - strand, within QEN71_RS22405 at 4978.845 kb on - strand, within QEN71_RS22405 at 4978.845 kb on - strand, within QEN71_RS22405 at 4979.018 kb on + strand, within QEN71_RS22405 at 4979.018 kb on + strand, within QEN71_RS22405 at 4979.018 kb on + strand, within QEN71_RS22405 at 4979.018 kb on + strand, within QEN71_RS22405 at 4979.018 kb on + strand, within QEN71_RS22405 at 4979.018 kb on + strand, within QEN71_RS22405 at 4979.018 kb on + strand, within QEN71_RS22405 at 4979.019 kb on - strand, within QEN71_RS22405 at 4979.019 kb on - strand, within QEN71_RS22405 at 4979.019 kb on - strand, within QEN71_RS22405 at 4979.019 kb on - strand, within QEN71_RS22405 at 4979.060 kb on + strand, within QEN71_RS22405 at 4979.060 kb on + strand, within QEN71_RS22405 at 4979.061 kb on - strand, within QEN71_RS22405 at 4979.061 kb on - strand, within QEN71_RS22405 at 4979.061 kb on - strand, within QEN71_RS22405 at 4979.061 kb on - strand, within QEN71_RS22405 at 4979.061 kb on - strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.240 kb on + strand, within QEN71_RS22405 at 4979.241 kb on - strand, within QEN71_RS22405 at 4979.241 kb on - strand, within QEN71_RS22405 at 4979.241 kb on - strand, within QEN71_RS22405 at 4979.241 kb on - strand, within QEN71_RS22405 at 4979.241 kb on - strand, within QEN71_RS22405 at 4979.241 kb on - strand, within QEN71_RS22405 at 4979.273 kb on + strand, within QEN71_RS22405 at 4979.273 kb on + strand, within QEN71_RS22405 at 4979.273 kb on + strand, within QEN71_RS22405 at 4979.274 kb on - strand, within QEN71_RS22405 at 4979.274 kb on - strand, within QEN71_RS22405 at 4979.274 kb on - strand, within QEN71_RS22405 at 4979.274 kb on - strand, within QEN71_RS22405 at 4979.274 kb on - strand, within QEN71_RS22405 at 4979.274 kb on - strand, within QEN71_RS22405
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,976,326 + -2.5 4,976,326 + +0.0 4,976,327 - -0.2 4,976,499 + -0.2 4,976,499 + +0.5 4,976,596 + -1.1 4,976,596 + -1.1 4,976,596 + +1.0 4,976,596 + +0.8 4,976,596 + +0.2 4,976,596 + +0.1 4,976,596 + -0.9 4,976,596 + -0.2 4,976,596 + -0.1 4,976,596 + +0.4 4,976,596 + +0.1 4,976,596 + -0.4 4,976,622 + -0.7 4,976,622 + -0.1 4,976,622 + -0.8 4,976,622 + +0.4 4,976,622 + +1.0 4,976,622 + -0.8 4,976,622 + +0.0 4,976,623 - -0.5 4,976,623 - -0.8 4,976,623 - +1.6 4,976,623 - +0.1 4,976,658 - +0.1 4,976,658 - +0.2 4,976,658 - -0.1 4,976,658 - +0.6 4,976,658 - -0.2 4,976,658 - -0.6 4,976,658 - +0.7 4,976,658 - -0.2 4,976,658 - +0.5 4,976,658 - -1.0 4,976,658 - +0.4 4,976,658 - -0.7 4,976,658 - -0.1 4,976,658 - -1.0 4,976,937 + -3.6 4,976,937 + -2.1 4,976,938 - -1.2 4,976,938 - -0.6 4,976,938 - -0.5 4,976,938 - +1.1 4,976,938 - -0.4 4,977,160 - QEN71_RS22400 0.16 -2.4 4,977,165 + QEN71_RS22400 0.16 -3.6 4,977,166 - QEN71_RS22400 0.16 -0.5 4,977,207 + QEN71_RS22400 0.19 -2.8 4,977,231 + QEN71_RS22400 0.21 -2.7 4,977,232 - QEN71_RS22400 0.21 -1.4 4,977,422 + QEN71_RS22400 0.34 +0.4 4,977,422 + QEN71_RS22400 0.34 -3.6 4,977,422 + QEN71_RS22400 0.34 -0.2 4,977,422 + QEN71_RS22400 0.34 -3.4 4,977,422 + QEN71_RS22400 0.34 -2.2 4,977,422 + QEN71_RS22400 0.34 -2.2 4,977,423 - QEN71_RS22400 0.34 -1.7 4,977,423 - QEN71_RS22400 0.34 -2.3 4,977,423 - QEN71_RS22400 0.34 -2.1 4,977,449 + QEN71_RS22400 0.36 -3.6 4,977,449 + QEN71_RS22400 0.36 -2.0 4,977,449 + QEN71_RS22400 0.36 -2.0 4,977,624 - QEN71_RS22400 0.48 -2.9 4,977,636 - QEN71_RS22400 0.49 -0.9 4,977,636 - QEN71_RS22400 0.49 -3.0 4,977,636 - QEN71_RS22400 0.49 -1.8 4,977,636 - QEN71_RS22400 0.49 -2.5 4,977,638 + QEN71_RS22400 0.49 -0.8 4,977,638 + QEN71_RS22400 0.49 -1.7 4,977,638 + QEN71_RS22400 0.49 -2.9 4,977,639 - QEN71_RS22400 0.49 -0.9 4,977,639 - QEN71_RS22400 0.49 -1.4 4,977,639 - QEN71_RS22400 0.49 -2.7 4,977,639 - QEN71_RS22400 0.49 -1.0 4,977,639 - QEN71_RS22400 0.49 -0.2 4,977,639 - QEN71_RS22400 0.49 -2.0 4,977,803 + QEN71_RS22400 0.60 -4.2 4,977,804 - QEN71_RS22400 0.60 -0.5 4,977,804 - QEN71_RS22400 0.60 -2.4 4,977,804 - QEN71_RS22400 0.60 +0.1 4,977,962 + QEN71_RS22400 0.71 -3.6 4,978,121 + QEN71_RS22400 0.82 -0.5 4,978,121 + QEN71_RS22400 0.82 -3.7 4,978,121 + QEN71_RS22400 0.82 -5.2 4,978,122 - QEN71_RS22400 0.82 -0.1 4,978,122 - QEN71_RS22400 0.82 -3.0 4,978,122 - QEN71_RS22400 0.82 -4.0 4,978,136 + QEN71_RS22400 0.83 -4.4 4,978,136 + QEN71_RS22400 0.83 -2.9 4,978,136 + QEN71_RS22400 0.83 -3.6 4,978,137 - QEN71_RS22400 0.83 -0.7 4,978,137 - QEN71_RS22400 0.83 -1.9 4,978,137 - QEN71_RS22400 0.83 -1.6 4,978,221 - QEN71_RS22400 0.89 -2.5 4,978,262 + -1.7 4,978,268 + -0.9 4,978,283 + -2.7 4,978,283 + -2.7 4,978,332 + -0.5 4,978,332 + +0.7 4,978,332 + -1.4 4,978,332 + -2.5 4,978,333 - -3.7 4,978,370 + -2.3 4,978,370 + -3.7 4,978,370 + -3.4 4,978,371 - -2.1 4,978,371 - -2.0 4,978,391 + -2.8 4,978,391 + -1.7 4,978,391 + -2.7 4,978,391 + -0.1 4,978,392 - -1.2 4,978,392 - -0.9 4,978,392 - +1.1 4,978,392 - -0.5 4,978,392 - -0.0 4,978,392 - -1.1 4,978,392 - -0.0 4,978,614 + QEN71_RS22405 0.15 +0.1 4,978,614 + QEN71_RS22405 0.15 -1.4 4,978,615 - QEN71_RS22405 0.16 -3.2 4,978,615 - QEN71_RS22405 0.16 -2.6 4,978,667 + QEN71_RS22405 0.19 -2.3 4,978,667 + QEN71_RS22405 0.19 -5.2 4,978,667 + QEN71_RS22405 0.19 -2.7 4,978,667 + QEN71_RS22405 0.19 -0.7 4,978,667 + QEN71_RS22405 0.19 -1.2 4,978,668 - QEN71_RS22405 0.20 -2.2 4,978,668 - QEN71_RS22405 0.20 -4.2 4,978,668 - QEN71_RS22405 0.20 -2.9 4,978,668 - QEN71_RS22405 0.20 -3.2 4,978,668 - QEN71_RS22405 0.20 -4.6 4,978,668 - QEN71_RS22405 0.20 -2.3 4,978,668 - QEN71_RS22405 0.20 -1.4 4,978,670 + QEN71_RS22405 0.20 -1.5 4,978,670 + QEN71_RS22405 0.20 -1.9 4,978,671 - QEN71_RS22405 0.20 -3.0 4,978,767 + QEN71_RS22405 0.27 -1.0 4,978,767 + QEN71_RS22405 0.27 -2.6 4,978,767 + QEN71_RS22405 0.27 -2.3 4,978,768 - QEN71_RS22405 0.27 -4.7 4,978,842 - QEN71_RS22405 0.33 -0.0 4,978,842 - QEN71_RS22405 0.33 -2.7 4,978,844 + QEN71_RS22405 0.33 -4.0 4,978,844 + QEN71_RS22405 0.33 -2.8 4,978,844 + QEN71_RS22405 0.33 -3.8 4,978,845 - QEN71_RS22405 0.33 -1.1 4,978,845 - QEN71_RS22405 0.33 -3.6 4,978,845 - QEN71_RS22405 0.33 -4.8 4,979,018 + QEN71_RS22405 0.46 -4.1 4,979,018 + QEN71_RS22405 0.46 -4.4 4,979,018 + QEN71_RS22405 0.46 -3.6 4,979,018 + QEN71_RS22405 0.46 -2.9 4,979,018 + QEN71_RS22405 0.46 -3.0 4,979,018 + QEN71_RS22405 0.46 -2.3 4,979,018 + QEN71_RS22405 0.46 -2.6 4,979,019 - QEN71_RS22405 0.46 -3.8 4,979,019 - QEN71_RS22405 0.46 -3.1 4,979,019 - QEN71_RS22405 0.46 -4.6 4,979,019 - QEN71_RS22405 0.46 -0.2 4,979,060 + QEN71_RS22405 0.49 -2.3 4,979,060 + QEN71_RS22405 0.49 -1.1 4,979,061 - QEN71_RS22405 0.49 -0.7 4,979,061 - QEN71_RS22405 0.49 -5.2 4,979,061 - QEN71_RS22405 0.49 -4.2 4,979,061 - QEN71_RS22405 0.49 -4.6 4,979,061 - QEN71_RS22405 0.49 -3.7 4,979,240 + QEN71_RS22405 0.62 -2.8 4,979,240 + QEN71_RS22405 0.62 -1.8 4,979,240 + QEN71_RS22405 0.62 -3.5 4,979,240 + QEN71_RS22405 0.62 -2.9 4,979,240 + QEN71_RS22405 0.62 -2.5 4,979,240 + QEN71_RS22405 0.62 -1.6 4,979,240 + QEN71_RS22405 0.62 +0.1 4,979,240 + QEN71_RS22405 0.62 -2.9 4,979,240 + QEN71_RS22405 0.62 -4.0 4,979,240 + QEN71_RS22405 0.62 -3.8 4,979,241 - QEN71_RS22405 0.63 -0.7 4,979,241 - QEN71_RS22405 0.63 -4.4 4,979,241 - QEN71_RS22405 0.63 -2.7 4,979,241 - QEN71_RS22405 0.63 -4.7 4,979,241 - QEN71_RS22405 0.63 -4.3 4,979,241 - QEN71_RS22405 0.63 -2.4 4,979,273 + QEN71_RS22405 0.65 -1.1 4,979,273 + QEN71_RS22405 0.65 -5.5 4,979,273 + QEN71_RS22405 0.65 -2.5 4,979,274 - QEN71_RS22405 0.65 -3.3 4,979,274 - QEN71_RS22405 0.65 -2.6 4,979,274 - QEN71_RS22405 0.65 -5.4 4,979,274 - QEN71_RS22405 0.65 -3.8 4,979,274 - QEN71_RS22405 0.65 -1.8 4,979,274 - QEN71_RS22405 0.65 -1.2
Or see this region's nucleotide sequence