Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS22330

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
4,954,873	+		QEN71_RS22320	0.71	+0.2
4,954,873	+		QEN71_RS22320	0.71	-2.0
4,954,873	+		QEN71_RS22320	0.71	+0.5
4,954,873	+		QEN71_RS22320	0.71	+0.8
4,954,873	+		QEN71_RS22320	0.71	-0.4
4,954,873	+		QEN71_RS22320	0.71	-0.4
4,954,873	+		QEN71_RS22320	0.71	-0.5
4,954,873	+		QEN71_RS22320	0.71	-0.2
4,954,873	+		QEN71_RS22320	0.71	+0.8
4,954,873	+		QEN71_RS22320	0.71	+0.7
4,954,874	-		QEN71_RS22320	0.71	-0.8
4,954,874	-		QEN71_RS22320	0.71	+1.4
4,954,874	-		QEN71_RS22320	0.71	-0.5
4,954,874	-		QEN71_RS22320	0.71	-0.7
4,954,874	-		QEN71_RS22320	0.71	+0.3
4,954,874	-		QEN71_RS22320	0.71	+1.0
4,954,874	-		QEN71_RS22320	0.71	-0.0
4,954,954	+		QEN71_RS22320	0.80	+0.6
4,954,988	+		QEN71_RS22320	0.84	+1.0
4,954,988	+		QEN71_RS22320	0.84	-0.3
4,954,989	-		QEN71_RS22320	0.84	-0.9
4,955,035	+				+0.2
4,955,047	+				-0.1
4,955,048	-				-0.5
4,955,048	-				+0.4
4,955,048	-				+0.3
4,955,065	+				-0.4
4,955,065	+				+0.4
4,955,065	+				-0.2
4,955,065	+				+0.1
4,955,065	+				+0.2
4,955,066	-				+0.6
4,955,066	-				+0.4
4,955,066	-				+0.8
4,955,066	-				-0.4
4,955,066	-				+0.2
4,955,533	+				-1.6
4,955,533	+				+0.5
4,955,533	+				-0.3
4,955,533	+				-0.6
4,955,533	+				-0.4
4,955,533	+				-1.2
4,955,533	+				+1.1
4,955,533	+				-1.1
4,955,533	+				-0.5
4,955,533	+				-1.7
4,955,533	+				-0.2
4,955,533	+				+0.7
4,955,533	+				+0.4
4,955,533	+				+0.2
4,955,533	+				-0.0
4,955,533	+				+1.4
4,955,534	-				+0.2
4,955,534	-				-0.9
4,955,536	+				-0.7
4,955,536	+				-0.4
4,955,536	+				-0.0
4,955,536	+				-1.7
4,955,537	-				-0.2
4,955,571	+				+1.2
4,955,571	+				+0.8
4,955,571	+				+0.1
4,955,666	-				-0.4
4,955,676	-				-0.2
4,955,722	+				-1.2
4,955,722	+				+1.3
4,955,722	+				+1.4
4,955,722	+				-0.2
4,955,722	+				-1.0
4,955,723	-				+3.1
4,955,723	-				-0.5
4,955,723	-				-0.2
4,957,242	+		QEN71_RS22330	0.81	-0.7
4,957,242	+		QEN71_RS22330	0.81	-1.6
4,957,242	+		QEN71_RS22330	0.81	-0.2
4,957,242	+		QEN71_RS22330	0.81	-0.2
4,957,242	+		QEN71_RS22330	0.81	-0.1
4,957,242	+		QEN71_RS22330	0.81	-0.2
4,957,243	-		QEN71_RS22330	0.81	-1.1
4,957,243	-		QEN71_RS22330	0.81	-0.9
4,957,243	-		QEN71_RS22330	0.81	-0.2
4,957,500	+				+1.8
4,957,500	+				-0.5
4,957,500	+				-1.6
4,957,500	+				+0.1
4,957,500	+				-0.2
4,957,500	+				+0.6
4,957,501	-				+1.0
4,957,501	-				+0.6
4,957,501	-				-0.7
4,957,501	-				+0.4
4,957,501	-				-1.2
4,957,721	+		QEN71_RS22335	0.11	-1.1
4,957,721	+		QEN71_RS22335	0.11	+0.1
4,957,721	+		QEN71_RS22335	0.11	-0.2
4,957,721	+		QEN71_RS22335	0.11	-0.3
4,957,721	+		QEN71_RS22335	0.11	+0.3
4,957,721	+		QEN71_RS22335	0.11	-0.1
4,957,721	+		QEN71_RS22335	0.11	+0.1
4,957,721	+		QEN71_RS22335	0.11	-0.2
4,957,721	+		QEN71_RS22335	0.11	+0.8
4,957,721	+		QEN71_RS22335	0.11	+0.1
4,957,721	+		QEN71_RS22335	0.11	-0.3
4,957,721	+		QEN71_RS22335	0.11	-0.2
4,957,721	+		QEN71_RS22335	0.11	+0.1
4,957,721	+		QEN71_RS22335	0.11	-0.1
4,957,721	+		QEN71_RS22335	0.11	+0.7
4,957,721	+		QEN71_RS22335	0.11	+0.2
4,957,722	-		QEN71_RS22335	0.11	-0.1
4,957,722	-		QEN71_RS22335	0.11	-1.2
4,957,722	-		QEN71_RS22335	0.11	+1.6
4,957,722	-		QEN71_RS22335	0.11	-0.4
4,957,722	-		QEN71_RS22335	0.11	+0.0
4,957,722	-		QEN71_RS22335	0.11	-1.0
4,957,722	-		QEN71_RS22335	0.11	+0.0
4,957,722	-		QEN71_RS22335	0.11	+0.1
4,957,722	-		QEN71_RS22335	0.11	-1.8
4,957,722	-		QEN71_RS22335	0.11	-0.0
4,957,722	-		QEN71_RS22335	0.11	-1.2
4,957,722	-		QEN71_RS22335	0.11	+0.6
4,957,722	-		QEN71_RS22335	0.11	+0.6
4,957,722	-		QEN71_RS22335	0.11	-0.3
4,957,722	-		QEN71_RS22335	0.11	-0.3
4,957,722	-		QEN71_RS22335	0.11	-0.3
4,957,722	-		QEN71_RS22335	0.11	+0.3
4,957,723	+		QEN71_RS22335	0.11	-0.4
4,957,723	+		QEN71_RS22335	0.11	+0.1
4,957,723	+		QEN71_RS22335	0.11	+0.1
4,957,723	+		QEN71_RS22335	0.11	+0.5
4,957,723	+		QEN71_RS22335	0.11	-0.7
4,957,724	-		QEN71_RS22335	0.11	+0.0
4,957,724	-		QEN71_RS22335	0.11	-0.4
4,957,724	-		QEN71_RS22335	0.11	-0.9
4,957,724	-		QEN71_RS22335	0.11	+0.8
4,957,733	+		QEN71_RS22335	0.12	-0.8
4,957,733	+		QEN71_RS22335	0.12	-0.6
4,957,734	-		QEN71_RS22335	0.12	-0.4
4,957,734	-		QEN71_RS22335	0.12	-1.8
4,957,734	-		QEN71_RS22335	0.12	-0.8
4,957,734	-		QEN71_RS22335	0.12	-0.2
4,957,787	+		QEN71_RS22335	0.16	+0.8
4,957,787	+		QEN71_RS22335	0.16	-1.8
4,957,787	+		QEN71_RS22335	0.16	-1.7
4,957,788	-		QEN71_RS22335	0.16	+0.1
4,957,880	+		QEN71_RS22335	0.22	-1.1
4,957,880	+		QEN71_RS22335	0.22	-0.3
4,957,880	+		QEN71_RS22335	0.22	-0.0
4,957,880	+		QEN71_RS22335	0.22	-0.1
4,957,881	-		QEN71_RS22335	0.22	-1.7
4,957,946	+		QEN71_RS22335	0.27	-0.6
4,957,946	+		QEN71_RS22335	0.27	+0.4
4,957,946	+		QEN71_RS22335	0.27	+1.4
4,957,947	-		QEN71_RS22335	0.27	+1.2
4,957,947	-		QEN71_RS22335	0.27	+0.9
4,957,947	-		QEN71_RS22335	0.27	-0.9
4,957,947	-		QEN71_RS22335	0.27	-1.9
4,957,956	+		QEN71_RS22335	0.28	+1.2
4,957,956	+		QEN71_RS22335	0.28	-0.3
4,957,957	-		QEN71_RS22335	0.28	-0.6
4,957,957	-		QEN71_RS22335	0.28	-0.5
4,957,957	-		QEN71_RS22335	0.28	-0.5
4,957,997	+		QEN71_RS22335	0.31	+0.5
4,957,997	+		QEN71_RS22335	0.31	-0.8
4,957,998	-		QEN71_RS22335	0.31	-0.2
4,957,998	-		QEN71_RS22335	0.31	-2.2
4,957,998	-		QEN71_RS22335	0.31	-0.3
4,957,998	-		QEN71_RS22335	0.31	+2.0
4,957,999	+		QEN71_RS22335	0.31	-0.0
4,957,999	+		QEN71_RS22335	0.31	-0.8
4,957,999	+		QEN71_RS22335	0.31	-0.5
4,957,999	+		QEN71_RS22335	0.31	-1.1
4,957,999	+		QEN71_RS22335	0.31	-0.6
4,957,999	+		QEN71_RS22335	0.31	-1.1
4,957,999	+		QEN71_RS22335	0.31	-0.4
4,957,999	+		QEN71_RS22335	0.31	-2.5
4,957,999	+		QEN71_RS22335	0.31	+0.1
4,958,000	-		QEN71_RS22335	0.31	-1.3
4,958,000	-		QEN71_RS22335	0.31	-1.0
4,958,000	-		QEN71_RS22335	0.31	+0.7
4,958,000	-		QEN71_RS22335	0.31	+0.1
4,958,000	-		QEN71_RS22335	0.31	-0.6
4,958,000	-		QEN71_RS22335	0.31	-1.2
4,958,000	-		QEN71_RS22335	0.31	+0.2
4,958,303	+		QEN71_RS22335	0.53	-1.5
4,958,303	+		QEN71_RS22335	0.53	+0.6
4,958,303	+		QEN71_RS22335	0.53	+0.6
4,958,304	-		QEN71_RS22335	0.53	-0.7
4,958,304	-		QEN71_RS22335	0.53	-0.5
4,958,324	+		QEN71_RS22335	0.55	+0.4
4,958,324	+		QEN71_RS22335	0.55	+0.9
4,958,324	+		QEN71_RS22335	0.55	-2.0
4,958,324	+		QEN71_RS22335	0.55	-0.7
4,958,325	-		QEN71_RS22335	0.55	-1.0
4,958,325	-		QEN71_RS22335	0.55	+0.5
4,958,325	-		QEN71_RS22335	0.55	-1.2
4,958,325	-		QEN71_RS22335	0.55	-0.7
4,958,325	-		QEN71_RS22335	0.55	-1.4
4,958,325	-		QEN71_RS22335	0.55	-1.5
4,958,325	-		QEN71_RS22335	0.55	-0.3
4,958,325	-		QEN71_RS22335	0.55	-0.1
4,958,325	-		QEN71_RS22335	0.55	-1.5
4,958,395	+		QEN71_RS22335	0.60	+0.3
4,958,411	+		QEN71_RS22335	0.61	-0.3
4,958,411	+		QEN71_RS22335	0.61	-0.3
4,958,411	+		QEN71_RS22335	0.61	-0.6
4,958,411	+		QEN71_RS22335	0.61	-0.7
4,958,411	+		QEN71_RS22335	0.61	+0.7
4,958,411	+		QEN71_RS22335	0.61	-0.1
4,958,411	+		QEN71_RS22335	0.61	-1.2
4,958,411	+		QEN71_RS22335	0.61	+0.7
4,958,411	+		QEN71_RS22335	0.61	+0.1
4,958,412	-		QEN71_RS22335	0.61	-1.4
4,958,412	-		QEN71_RS22335	0.61	-1.5
4,958,412	-		QEN71_RS22335	0.61	-1.8
4,958,412	-		QEN71_RS22335	0.61	-0.9
4,958,412	-		QEN71_RS22335	0.61	-0.2
4,958,412	-		QEN71_RS22335	0.61	-0.3
4,958,412	-		QEN71_RS22335	0.61	-0.5
4,958,412	-		QEN71_RS22335	0.61	-1.8
4,958,412	-		QEN71_RS22335	0.61	-0.7
4,958,412	-		QEN71_RS22335	0.61	-0.1
4,958,412	-		QEN71_RS22335	0.61	-2.4
4,958,412	-		QEN71_RS22335	0.61	+0.5
4,958,412	-		QEN71_RS22335	0.61	-1.7
4,958,412	-		QEN71_RS22335	0.61	+1.7
4,958,480	+		QEN71_RS22335	0.66	-0.5
4,958,543	+		QEN71_RS22335	0.70	-1.1
4,958,544	-		QEN71_RS22335	0.71	+0.1