Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS19590 and QEN71_RS19595 are separated by 21 nucleotides QEN71_RS19595 and QEN71_RS19600 are separated by 4 nucleotides
QEN71_RS19590: QEN71_RS19590 - XdhC family protein, at 4,364,181 to 4,365,212
_RS19590
QEN71_RS19595: QEN71_RS19595 - class I adenylate-forming enzyme family protein, at 4,365,234 to 4,366,865
_RS19595
QEN71_RS19600: QEN71_RS19600 - LysR substrate-binding domain-containing protein, at 4,366,870 to 4,367,835
_RS19600
Position (kb)
4365
4366
4367 Strain fitness (log2 ratio)
-2
-1
0
1 at 4364.690 kb on + strand, within QEN71_RS19590 at 4364.778 kb on + strand, within QEN71_RS19590 at 4364.943 kb on + strand, within QEN71_RS19590 at 4364.943 kb on + strand, within QEN71_RS19590 at 4364.943 kb on + strand, within QEN71_RS19590 at 4364.943 kb on + strand, within QEN71_RS19590 at 4364.944 kb on - strand, within QEN71_RS19590 at 4364.944 kb on - strand, within QEN71_RS19590 at 4365.054 kb on + strand, within QEN71_RS19590 at 4365.054 kb on + strand, within QEN71_RS19590 at 4365.054 kb on + strand, within QEN71_RS19590 at 4365.054 kb on + strand, within QEN71_RS19590 at 4365.055 kb on - strand, within QEN71_RS19590 at 4365.055 kb on - strand, within QEN71_RS19590 at 4365.055 kb on - strand, within QEN71_RS19590 at 4365.055 kb on - strand, within QEN71_RS19590 at 4365.055 kb on - strand, within QEN71_RS19590 at 4365.055 kb on - strand, within QEN71_RS19590 at 4365.055 kb on - strand, within QEN71_RS19590 at 4365.469 kb on + strand, within QEN71_RS19595 at 4365.470 kb on - strand, within QEN71_RS19595 at 4366.035 kb on + strand, within QEN71_RS19595 at 4366.154 kb on - strand, within QEN71_RS19595 at 4366.237 kb on + strand, within QEN71_RS19595 at 4366.253 kb on - strand, within QEN71_RS19595 at 4366.661 kb on + strand, within QEN71_RS19595 at 4367.018 kb on + strand, within QEN71_RS19600 at 4367.019 kb on - strand, within QEN71_RS19600 at 4367.019 kb on - strand, within QEN71_RS19600 at 4367.019 kb on - strand, within QEN71_RS19600 at 4367.019 kb on - strand, within QEN71_RS19600 at 4367.022 kb on - strand, within QEN71_RS19600 at 4367.022 kb on - strand, within QEN71_RS19600 at 4367.234 kb on + strand, within QEN71_RS19600 at 4367.235 kb on - strand, within QEN71_RS19600 at 4367.243 kb on + strand, within QEN71_RS19600 at 4367.243 kb on + strand, within QEN71_RS19600 at 4367.244 kb on - strand, within QEN71_RS19600 at 4367.244 kb on - strand, within QEN71_RS19600 at 4367.249 kb on + strand, within QEN71_RS19600 at 4367.249 kb on + strand, within QEN71_RS19600 at 4367.249 kb on + strand, within QEN71_RS19600 at 4367.249 kb on + strand, within QEN71_RS19600 at 4367.249 kb on + strand, within QEN71_RS19600 at 4367.250 kb on - strand, within QEN71_RS19600 at 4367.414 kb on + strand, within QEN71_RS19600 at 4367.414 kb on + strand, within QEN71_RS19600 at 4367.477 kb on + strand, within QEN71_RS19600 at 4367.526 kb on - strand, within QEN71_RS19600 at 4367.526 kb on - strand, within QEN71_RS19600 at 4367.820 kb on + strand at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.822 kb on - strand at 4367.822 kb on - strand at 4367.825 kb on + strand at 4367.825 kb on + strand at 4367.826 kb on - strand at 4367.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,364,690 + QEN71_RS19590 0.49 +0.4 4,364,778 + QEN71_RS19590 0.58 +1.1 4,364,943 + QEN71_RS19590 0.74 -0.5 4,364,943 + QEN71_RS19590 0.74 -0.5 4,364,943 + QEN71_RS19590 0.74 +0.5 4,364,943 + QEN71_RS19590 0.74 -1.9 4,364,944 - QEN71_RS19590 0.74 -0.3 4,364,944 - QEN71_RS19590 0.74 -1.7 4,365,054 + QEN71_RS19590 0.85 -0.4 4,365,054 + QEN71_RS19590 0.85 -0.5 4,365,054 + QEN71_RS19590 0.85 -0.7 4,365,054 + QEN71_RS19590 0.85 -0.8 4,365,055 - QEN71_RS19590 0.85 -0.6 4,365,055 - QEN71_RS19590 0.85 -1.0 4,365,055 - QEN71_RS19590 0.85 -0.7 4,365,055 - QEN71_RS19590 0.85 -1.6 4,365,055 - QEN71_RS19590 0.85 -0.8 4,365,055 - QEN71_RS19590 0.85 -0.5 4,365,055 - QEN71_RS19590 0.85 -0.3 4,365,469 + QEN71_RS19595 0.14 -0.8 4,365,470 - QEN71_RS19595 0.14 +0.2 4,366,035 + QEN71_RS19595 0.49 -2.4 4,366,154 - QEN71_RS19595 0.56 -1.0 4,366,237 + QEN71_RS19595 0.61 -1.2 4,366,253 - QEN71_RS19595 0.62 +0.0 4,366,661 + QEN71_RS19595 0.87 -1.0 4,367,018 + QEN71_RS19600 0.15 +0.8 4,367,019 - QEN71_RS19600 0.15 +0.2 4,367,019 - QEN71_RS19600 0.15 -0.8 4,367,019 - QEN71_RS19600 0.15 -0.7 4,367,019 - QEN71_RS19600 0.15 +0.3 4,367,022 - QEN71_RS19600 0.16 +0.0 4,367,022 - QEN71_RS19600 0.16 +0.9 4,367,234 + QEN71_RS19600 0.38 -2.4 4,367,235 - QEN71_RS19600 0.38 +0.8 4,367,243 + QEN71_RS19600 0.39 +1.1 4,367,243 + QEN71_RS19600 0.39 -0.6 4,367,244 - QEN71_RS19600 0.39 +0.0 4,367,244 - QEN71_RS19600 0.39 +0.7 4,367,249 + QEN71_RS19600 0.39 -0.1 4,367,249 + QEN71_RS19600 0.39 -0.5 4,367,249 + QEN71_RS19600 0.39 -0.3 4,367,249 + QEN71_RS19600 0.39 -1.8 4,367,249 + QEN71_RS19600 0.39 -0.0 4,367,250 - QEN71_RS19600 0.39 +0.1 4,367,414 + QEN71_RS19600 0.56 -0.5 4,367,414 + QEN71_RS19600 0.56 +0.1 4,367,477 + QEN71_RS19600 0.63 +0.4 4,367,526 - QEN71_RS19600 0.68 -0.1 4,367,526 - QEN71_RS19600 0.68 -0.2 4,367,820 + +0.4 4,367,821 + +1.1 4,367,821 + +0.2 4,367,821 + +0.0 4,367,821 + -0.7 4,367,821 + -1.1 4,367,822 - -0.4 4,367,822 - -1.1 4,367,825 + -0.0 4,367,825 + -0.6 4,367,826 - +1.3 4,367,838 - +0.3
Or see this region's nucleotide sequence