Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS17680

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,929,145	+		QEN71_RS17670	0.84	-1.0
3,929,145	+		QEN71_RS17670	0.84	-1.4
3,929,145	+		QEN71_RS17670	0.84	-4.1
3,929,145	+		QEN71_RS17670	0.84	+0.0
3,929,145	+		QEN71_RS17670	0.84	-0.4
3,929,146	-		QEN71_RS17670	0.84	-0.8
3,929,146	-		QEN71_RS17670	0.84	-3.0
3,929,146	-		QEN71_RS17670	0.84	-0.3
3,929,146	-		QEN71_RS17670	0.84	-2.3
3,929,147	+		QEN71_RS17670	0.84	-0.6
3,929,147	+		QEN71_RS17670	0.84	-1.3
3,929,147	+		QEN71_RS17670	0.84	-0.9
3,929,147	+		QEN71_RS17670	0.84	-1.7
3,929,147	+		QEN71_RS17670	0.84	-0.8
3,929,147	+		QEN71_RS17670	0.84	+0.6
3,929,147	+		QEN71_RS17670	0.84	-2.0
3,929,147	+		QEN71_RS17670	0.84	-0.3
3,929,147	+		QEN71_RS17670	0.84	-2.6
3,929,147	+		QEN71_RS17670	0.84	-1.4
3,929,147	+		QEN71_RS17670	0.84	-2.3
3,929,147	+		QEN71_RS17670	0.84	-1.6
3,929,147	+		QEN71_RS17670	0.84	-0.3
3,929,147	+		QEN71_RS17670	0.84	-1.4
3,929,147	+		QEN71_RS17670	0.84	-1.6
3,929,147	+		QEN71_RS17670	0.84	-2.1
3,929,148	-		QEN71_RS17670	0.84	-2.2
3,929,148	-		QEN71_RS17670	0.84	-0.9
3,929,148	-		QEN71_RS17670	0.84	-0.4
3,929,148	-		QEN71_RS17670	0.84	-2.5
3,929,148	-		QEN71_RS17670	0.84	-1.7
3,929,148	-		QEN71_RS17670	0.84	-1.7
3,929,148	-		QEN71_RS17670	0.84	-1.0
3,929,148	-		QEN71_RS17670	0.84	-3.4
3,929,148	-		QEN71_RS17670	0.84	-1.9
3,929,148	-		QEN71_RS17670	0.84	-0.6
3,929,178	-		QEN71_RS17670	0.88	-2.1
3,929,292	+				-0.6
3,929,292	+				-0.8
3,929,293	-				-2.3
3,929,293	-				-2.1
3,929,320	+				+0.4
3,929,320	+				-0.5
3,929,321	-				-2.4
3,929,321	-				-2.4
3,929,321	-				-3.1
3,929,327	+				+0.4
3,929,327	+				-0.6
3,929,327	+				-0.2
3,929,328	-				-2.3
3,929,328	-				-4.5
3,929,328	-				-2.3
3,929,328	-				-3.4
3,929,466	+		QEN71_RS17675	0.33	-0.4
3,929,466	+		QEN71_RS17675	0.33	-1.1
3,929,467	-		QEN71_RS17675	0.33	-0.8
3,929,467	-		QEN71_RS17675	0.33	-2.9
3,929,467	-		QEN71_RS17675	0.33	-2.4
3,929,630	+		QEN71_RS17675	0.66	-1.1
3,929,630	+		QEN71_RS17675	0.66	-0.3
3,929,631	-		QEN71_RS17675	0.66	-1.4
3,929,631	-		QEN71_RS17675	0.66	-2.5
3,929,642	+		QEN71_RS17675	0.69	-0.3
3,929,642	+		QEN71_RS17675	0.69	-0.3
3,929,642	+		QEN71_RS17675	0.69	-1.6
3,929,642	+		QEN71_RS17675	0.69	-0.5
3,929,642	+		QEN71_RS17675	0.69	-1.7
3,929,642	+		QEN71_RS17675	0.69	-1.1
3,929,642	+		QEN71_RS17675	0.69	-1.5
3,929,643	-		QEN71_RS17675	0.69	-2.5
3,929,643	-		QEN71_RS17675	0.69	-2.9
3,929,643	-		QEN71_RS17675	0.69	-2.4
3,929,643	-		QEN71_RS17675	0.69	-2.1
3,929,643	-		QEN71_RS17675	0.69	-1.0
3,929,643	-		QEN71_RS17675	0.69	-3.6
3,929,782	+				-0.3
3,929,782	+				+0.4
3,929,783	-				-2.4
3,929,783	-				-3.2
3,929,783	-				-3.3
3,929,783	-				-4.2
3,929,783	-				-3.4
3,929,783	-				-4.6
3,929,794	+				+0.6
3,929,794	+				-0.4
3,929,795	-				-2.0
3,929,795	-				-3.1
3,929,795	-				-4.5
3,929,945	+				-2.6
3,929,945	+				-0.3
3,929,945	+				-4.9
3,929,945	+				-2.7
3,929,945	+				-1.0
3,929,945	+				-3.6
3,929,946	-				-2.9
3,929,946	-				-4.2
3,929,946	-				-3.8
3,929,946	-				-1.9
3,929,946	-				-4.8
3,929,951	+				-2.9
3,929,951	+				-2.9
3,929,951	+				-1.4
3,929,951	+				-3.2
3,929,951	+				-5.1
3,929,951	+				-3.2
3,929,951	+				-5.5
3,929,951	+				-4.1
3,929,951	+				-3.6
3,929,951	+				-3.8
3,929,951	+				-2.4
3,929,951	+				-5.3
3,929,952	-				-3.8
3,929,952	-				-3.7
3,929,952	-				-0.8
3,929,952	-				-3.3
3,929,952	-				-5.1
3,929,983	+				-2.3
3,929,983	+				-3.5
3,929,983	+				-3.1
3,929,983	+				-0.8
3,929,983	+				-2.6
3,929,983	+				-4.6
3,929,983	+				-2.9
3,929,984	-				-3.4
3,929,984	-				-2.0
3,929,984	-				-0.4
3,929,984	-				-3.7
3,929,984	-				-6.1
3,929,984	-				-4.4
3,929,984	-				-1.8
3,929,984	-				-4.7
3,930,199	+		QEN71_RS17680	0.17	-3.8
3,930,199	+		QEN71_RS17680	0.17	-3.8
3,930,199	+		QEN71_RS17680	0.17	-2.8
3,930,199	+		QEN71_RS17680	0.17	-2.7
3,930,199	+		QEN71_RS17680	0.17	-2.6
3,930,199	+		QEN71_RS17680	0.17	-4.3
3,930,199	+		QEN71_RS17680	0.17	-0.6
3,930,199	+		QEN71_RS17680	0.17	-2.9
3,930,199	+		QEN71_RS17680	0.17	-1.8
3,930,200	-		QEN71_RS17680	0.17	-5.0
3,930,200	-		QEN71_RS17680	0.17	-5.0
3,930,200	-		QEN71_RS17680	0.17	-3.4
3,930,200	-		QEN71_RS17680	0.17	-6.4
3,930,200	-		QEN71_RS17680	0.17	-4.0
3,930,200	-		QEN71_RS17680	0.17	-0.6
3,930,303	+		QEN71_RS17680	0.24	-2.1
3,930,304	-		QEN71_RS17680	0.24	-2.1
3,930,304	-		QEN71_RS17680	0.24	-3.7
3,930,510	+		QEN71_RS17680	0.37	-3.6
3,930,511	-		QEN71_RS17680	0.37	-2.8
3,930,706	+		QEN71_RS17680	0.50	-3.7
3,930,706	+		QEN71_RS17680	0.50	-3.7
3,930,706	+		QEN71_RS17680	0.50	-2.3
3,930,706	+		QEN71_RS17680	0.50	-4.1
3,930,706	+		QEN71_RS17680	0.50	-1.4
3,930,706	+		QEN71_RS17680	0.50	-2.4
3,930,707	-		QEN71_RS17680	0.50	-1.1
3,930,707	-		QEN71_RS17680	0.50	-4.1
3,930,748	+		QEN71_RS17680	0.53	-4.5
3,930,749	-		QEN71_RS17680	0.53	-4.5
3,930,775	+		QEN71_RS17680	0.54	-1.1
3,930,775	+		QEN71_RS17680	0.54	-3.4
3,930,775	+		QEN71_RS17680	0.54	-2.8
3,930,775	+		QEN71_RS17680	0.54	-1.7
3,930,776	-		QEN71_RS17680	0.54	-2.3
3,930,776	-		QEN71_RS17680	0.54	-3.9
3,930,776	-		QEN71_RS17680	0.54	-1.7
3,930,895	+		QEN71_RS17680	0.62	-3.6
3,930,922	+		QEN71_RS17680	0.64	-2.7
3,930,922	+		QEN71_RS17680	0.64	-5.3
3,930,922	+		QEN71_RS17680	0.64	-4.4
3,930,922	+		QEN71_RS17680	0.64	-2.3
3,930,922	+		QEN71_RS17680	0.64	-3.2
3,930,922	+		QEN71_RS17680	0.64	-2.9
3,930,922	+		QEN71_RS17680	0.64	-3.5
3,930,922	+		QEN71_RS17680	0.64	-1.8
3,930,922	+		QEN71_RS17680	0.64	-3.0
3,930,922	+		QEN71_RS17680	0.64	-4.3
3,930,922	+		QEN71_RS17680	0.64	-3.6
3,930,923	-		QEN71_RS17680	0.64	-2.1
3,930,923	-		QEN71_RS17680	0.64	-3.3
3,930,923	-		QEN71_RS17680	0.64	-3.6
3,930,923	-		QEN71_RS17680	0.64	-4.6
3,931,150	+		QEN71_RS17680	0.79	-3.1
3,931,150	+		QEN71_RS17680	0.79	-4.9
3,931,151	-		QEN71_RS17680	0.79	-5.0
3,931,151	-		QEN71_RS17680	0.79	-1.7
3,931,243	+		QEN71_RS17680	0.85	-4.1
3,931,243	+		QEN71_RS17680	0.85	-3.9
3,931,243	+		QEN71_RS17680	0.85	-4.1
3,931,243	+		QEN71_RS17680	0.85	-3.7
3,931,244	-		QEN71_RS17680	0.85	-2.4
3,931,244	-		QEN71_RS17680	0.85	-3.8
3,931,244	-		QEN71_RS17680	0.85	-2.9
3,931,244	-		QEN71_RS17680	0.85	-3.0
3,931,330	+				-4.1
3,931,330	+				-3.6
3,931,330	+				-5.5
3,931,330	+				-1.4
3,931,330	+				-3.3
3,931,330	+				-4.8
3,931,330	+				-3.7
3,931,330	+				-2.9
3,931,330	+				-3.1
3,931,330	+				-2.8
3,931,330	+				-2.8
3,931,330	+				-3.7
3,931,330	+				-0.7
3,931,330	+				-4.2
3,931,330	+				-4.0
3,931,330	+				-1.1
3,931,330	+				-5.0
3,931,330	+				-2.2
3,931,330	+				-4.2
3,931,331	-				-3.2
3,931,331	-				-4.2
3,931,331	-				-3.1
3,931,331	-				-1.8
3,931,331	-				-4.6
3,931,331	-				-5.1
3,931,331	-				-2.7
3,931,331	-				-2.9
3,931,331	-				-5.9
3,931,331	-				-2.6
3,931,331	-				-2.1
3,931,331	-				-2.7
3,931,357	+				-0.8
3,931,480	+				-0.2
3,931,532	+				-1.0
3,931,532	+				-1.0
3,931,532	+				-1.1
3,931,532	+				-0.6
3,931,532	+				-0.6
3,931,533	-				+0.3
3,931,533	-				-0.3
3,931,533	-				-0.2
3,931,533	-				-0.3
3,931,533	-				+1.0
3,931,539	-				-0.1
3,931,748	+		QEN71_RS17685	0.12	-0.2
3,931,764	+		QEN71_RS17685	0.13	-0.9
3,931,764	+		QEN71_RS17685	0.13	+1.4
3,931,764	+		QEN71_RS17685	0.13	-0.1
3,931,764	+		QEN71_RS17685	0.13	-0.4
3,931,764	+		QEN71_RS17685	0.13	+0.2
3,931,765	-		QEN71_RS17685	0.13	-0.8
3,931,765	-		QEN71_RS17685	0.13	-1.1
3,931,765	-		QEN71_RS17685	0.13	+0.4
3,931,765	-		QEN71_RS17685	0.13	-1.0
3,931,765	-		QEN71_RS17685	0.13	-0.4
3,931,765	-		QEN71_RS17685	0.13	-0.9
3,931,765	-		QEN71_RS17685	0.13	-1.5
3,931,765	-		QEN71_RS17685	0.13	-1.0
3,931,765	-		QEN71_RS17685	0.13	-0.8
3,931,765	-		QEN71_RS17685	0.13	+0.2
3,931,765	-		QEN71_RS17685	0.13	-1.0
3,931,767	+		QEN71_RS17685	0.13	-0.7
3,931,767	+		QEN71_RS17685	0.13	-0.5
3,931,767	+		QEN71_RS17685	0.13	+0.4
3,931,767	+		QEN71_RS17685	0.13	-0.9
3,931,767	+		QEN71_RS17685	0.13	-0.1
3,931,767	+		QEN71_RS17685	0.13	-0.1
3,931,767	+		QEN71_RS17685	0.13	-1.0
3,931,767	+		QEN71_RS17685	0.13	-0.1
3,931,767	+		QEN71_RS17685	0.13	-0.7
3,931,767	+		QEN71_RS17685	0.13	-1.9
3,931,767	+		QEN71_RS17685	0.13	+0.4
3,931,767	+		QEN71_RS17685	0.13	+0.4
3,931,768	-		QEN71_RS17685	0.13	-1.0
3,931,768	-		QEN71_RS17685	0.13	-1.4
3,931,768	-		QEN71_RS17685	0.13	-0.1
3,931,768	-		QEN71_RS17685	0.13	-0.1
3,931,768	-		QEN71_RS17685	0.13	-2.4
3,931,768	-		QEN71_RS17685	0.13	+0.0
3,931,768	-		QEN71_RS17685	0.13	-0.1
3,931,768	-		QEN71_RS17685	0.13	-0.8
3,931,768	-		QEN71_RS17685	0.13	-1.3
3,931,768	-		QEN71_RS17685	0.13	+1.3
3,931,768	-		QEN71_RS17685	0.13	-2.1
3,931,768	-		QEN71_RS17685	0.13	+0.4
3,931,773	+		QEN71_RS17685	0.14	+1.1
3,931,773	+		QEN71_RS17685	0.14	+0.1
3,931,773	+		QEN71_RS17685	0.14	+0.5
3,931,773	+		QEN71_RS17685	0.14	-0.6
3,931,773	+		QEN71_RS17685	0.14	-0.0
3,931,773	+		QEN71_RS17685	0.14	-2.0
3,931,773	+		QEN71_RS17685	0.14	-0.9
3,931,773	+		QEN71_RS17685	0.14	-1.6
3,931,774	-		QEN71_RS17685	0.14	-1.4
3,931,774	-		QEN71_RS17685	0.14	-0.9
3,931,774	-		QEN71_RS17685	0.14	+1.0
3,931,774	-		QEN71_RS17685	0.14	-0.8
3,931,774	-		QEN71_RS17685	0.14	+0.8
3,931,774	-		QEN71_RS17685	0.14	+1.0
3,931,774	-		QEN71_RS17685	0.14	-0.3
3,931,988	+		QEN71_RS17685	0.32	-0.1
3,931,988	+		QEN71_RS17685	0.32	+0.1
3,931,988	+		QEN71_RS17685	0.32	-0.3
3,931,989	-		QEN71_RS17685	0.32	+2.4
3,931,989	-		QEN71_RS17685	0.32	-0.3
3,932,466	+		QEN71_RS17685	0.72	-0.1
3,932,467	-		QEN71_RS17685	0.72	-1.0
3,932,467	-		QEN71_RS17685	0.72	-1.5