Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS08640 and QEN71_RS08645 are separated by 346 nucleotides QEN71_RS08645 and QEN71_RS08650 are separated by 100 nucleotides QEN71_RS08650 and QEN71_RS08655 are separated by 151 nucleotides
QEN71_RS08640: QEN71_RS08640 - CBS domain-containing protein, at 1,933,131 to 1,933,565
_RS08640
QEN71_RS08645: QEN71_RS08645 - GTP cyclohydrolase II, at 1,933,912 to 1,934,553
_RS08645
QEN71_RS08650: QEN71_RS08650 - cysteine hydrolase family protein, at 1,934,654 to 1,935,199
_RS08650
QEN71_RS08655: QEN71_RS08655 - hypothetical protein, at 1,935,351 to 1,935,638
_RS08655
Position (kb)
1933
1934
1935 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1933.042 kb on - strand at 1933.042 kb on - strand at 1933.042 kb on - strand at 1933.143 kb on + strand at 1933.144 kb on - strand at 1933.144 kb on - strand at 1933.144 kb on - strand at 1933.144 kb on - strand at 1933.144 kb on - strand at 1933.144 kb on - strand at 1933.144 kb on - strand at 1933.147 kb on + strand at 1933.147 kb on + strand at 1933.147 kb on + strand at 1933.147 kb on + strand at 1933.147 kb on + strand at 1933.147 kb on + strand at 1933.147 kb on + strand at 1933.147 kb on + strand at 1933.148 kb on - strand at 1933.148 kb on - strand at 1933.148 kb on - strand at 1933.148 kb on - strand at 1933.148 kb on - strand at 1933.262 kb on + strand, within QEN71_RS08640 at 1933.262 kb on + strand, within QEN71_RS08640 at 1933.262 kb on + strand, within QEN71_RS08640 at 1933.262 kb on + strand, within QEN71_RS08640 at 1933.262 kb on + strand, within QEN71_RS08640 at 1933.262 kb on + strand, within QEN71_RS08640 at 1933.262 kb on + strand, within QEN71_RS08640 at 1933.263 kb on - strand, within QEN71_RS08640 at 1933.263 kb on - strand, within QEN71_RS08640 at 1933.263 kb on - strand, within QEN71_RS08640 at 1933.263 kb on - strand, within QEN71_RS08640 at 1933.397 kb on - strand, within QEN71_RS08640 at 1933.397 kb on - strand, within QEN71_RS08640 at 1933.490 kb on - strand, within QEN71_RS08640 at 1933.490 kb on - strand, within QEN71_RS08640 at 1933.490 kb on - strand, within QEN71_RS08640 at 1933.490 kb on - strand, within QEN71_RS08640 at 1933.516 kb on + strand, within QEN71_RS08640 at 1933.516 kb on + strand, within QEN71_RS08640 at 1933.516 kb on + strand, within QEN71_RS08640 at 1933.517 kb on - strand, within QEN71_RS08640 at 1933.517 kb on - strand, within QEN71_RS08640 at 1933.517 kb on - strand, within QEN71_RS08640 at 1933.517 kb on - strand, within QEN71_RS08640 at 1933.517 kb on - strand, within QEN71_RS08640 at 1933.560 kb on - strand at 1933.560 kb on - strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.657 kb on + strand at 1933.658 kb on - strand at 1933.658 kb on - strand at 1933.658 kb on - strand at 1933.658 kb on - strand at 1933.658 kb on - strand at 1933.658 kb on - strand at 1933.658 kb on - strand at 1933.659 kb on + strand at 1933.659 kb on + strand at 1933.659 kb on + strand at 1933.660 kb on - strand at 1933.660 kb on - strand at 1933.660 kb on - strand at 1933.660 kb on - strand at 1933.820 kb on + strand at 1933.820 kb on + strand at 1933.820 kb on + strand at 1933.820 kb on + strand at 1933.821 kb on - strand at 1933.855 kb on + strand at 1933.855 kb on + strand at 1933.856 kb on - strand at 1933.860 kb on + strand at 1933.860 kb on + strand at 1933.861 kb on - strand at 1934.014 kb on + strand, within QEN71_RS08645 at 1934.015 kb on - strand, within QEN71_RS08645 at 1934.141 kb on - strand, within QEN71_RS08645 at 1934.183 kb on - strand, within QEN71_RS08645 at 1934.183 kb on - strand, within QEN71_RS08645 at 1934.184 kb on + strand, within QEN71_RS08645 at 1934.185 kb on - strand, within QEN71_RS08645 at 1934.502 kb on + strand at 1934.533 kb on + strand at 1934.533 kb on + strand at 1934.534 kb on - strand at 1934.552 kb on - strand at 1934.552 kb on - strand at 1934.552 kb on - strand at 1934.552 kb on - strand at 1934.552 kb on - strand at 1934.554 kb on + strand at 1934.555 kb on - strand at 1934.555 kb on - strand at 1934.582 kb on + strand at 1934.583 kb on - strand at 1934.806 kb on - strand, within QEN71_RS08650 at 1934.987 kb on + strand, within QEN71_RS08650 at 1934.987 kb on + strand, within QEN71_RS08650 at 1934.987 kb on + strand, within QEN71_RS08650 at 1934.988 kb on - strand, within QEN71_RS08650 at 1934.988 kb on - strand, within QEN71_RS08650 at 1934.988 kb on - strand, within QEN71_RS08650 at 1934.988 kb on - strand, within QEN71_RS08650 at 1934.993 kb on + strand, within QEN71_RS08650 at 1934.993 kb on + strand, within QEN71_RS08650 at 1934.994 kb on - strand, within QEN71_RS08650 at 1934.994 kb on - strand, within QEN71_RS08650 at 1934.994 kb on - strand, within QEN71_RS08650 at 1934.994 kb on - strand, within QEN71_RS08650 at 1935.041 kb on + strand, within QEN71_RS08650 at 1935.042 kb on - strand, within QEN71_RS08650 at 1935.042 kb on - strand, within QEN71_RS08650 at 1935.042 kb on - strand, within QEN71_RS08650 at 1935.042 kb on - strand, within QEN71_RS08650 at 1935.053 kb on - strand, within QEN71_RS08650 at 1935.106 kb on + strand, within QEN71_RS08650 at 1935.106 kb on + strand, within QEN71_RS08650 at 1935.107 kb on - strand, within QEN71_RS08650 at 1935.107 kb on - strand, within QEN71_RS08650 at 1935.107 kb on - strand, within QEN71_RS08650 at 1935.107 kb on - strand, within QEN71_RS08650 at 1935.107 kb on - strand, within QEN71_RS08650 at 1935.181 kb on + strand at 1935.181 kb on + strand at 1935.213 kb on + strand at 1935.213 kb on + strand at 1935.214 kb on - strand at 1935.214 kb on - strand at 1935.328 kb on + strand at 1935.398 kb on + strand, within QEN71_RS08655 at 1935.398 kb on + strand, within QEN71_RS08655 at 1935.398 kb on + strand, within QEN71_RS08655 at 1935.399 kb on - strand, within QEN71_RS08655 at 1935.399 kb on - strand, within QEN71_RS08655 at 1935.399 kb on - strand, within QEN71_RS08655 at 1935.399 kb on - strand, within QEN71_RS08655 at 1935.399 kb on - strand, within QEN71_RS08655 at 1935.400 kb on + strand, within QEN71_RS08655 at 1935.401 kb on - strand, within QEN71_RS08655 at 1935.401 kb on - strand, within QEN71_RS08655 at 1935.401 kb on - strand, within QEN71_RS08655 at 1935.401 kb on - strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.466 kb on + strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.467 kb on - strand, within QEN71_RS08655 at 1935.470 kb on + strand, within QEN71_RS08655 at 1935.484 kb on + strand, within QEN71_RS08655 at 1935.484 kb on + strand, within QEN71_RS08655 at 1935.513 kb on + strand, within QEN71_RS08655 at 1935.514 kb on + strand, within QEN71_RS08655 at 1935.514 kb on + strand, within QEN71_RS08655 at 1935.514 kb on + strand, within QEN71_RS08655 at 1935.514 kb on + strand, within QEN71_RS08655 at 1935.514 kb on + strand, within QEN71_RS08655 at 1935.515 kb on - strand, within QEN71_RS08655 at 1935.515 kb on - strand, within QEN71_RS08655 at 1935.515 kb on - strand, within QEN71_RS08655 at 1935.550 kb on + strand, within QEN71_RS08655 at 1935.550 kb on + strand, within QEN71_RS08655 at 1935.550 kb on + strand, within QEN71_RS08655 at 1935.551 kb on - strand, within QEN71_RS08655
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 1,933,042 - -1.1 1,933,042 - +2.0 1,933,042 - -1.1 1,933,143 + -0.6 1,933,144 - +1.0 1,933,144 - -0.4 1,933,144 - +0.0 1,933,144 - +0.9 1,933,144 - +0.4 1,933,144 - +0.8 1,933,144 - +1.0 1,933,147 + -0.0 1,933,147 + +0.0 1,933,147 + +0.7 1,933,147 + +0.0 1,933,147 + +0.4 1,933,147 + -0.6 1,933,147 + -0.2 1,933,147 + -0.5 1,933,148 - +0.6 1,933,148 - +2.0 1,933,148 - -0.6 1,933,148 - -1.4 1,933,148 - -2.3 1,933,262 + QEN71_RS08640 0.30 -0.3 1,933,262 + QEN71_RS08640 0.30 -0.5 1,933,262 + QEN71_RS08640 0.30 -0.2 1,933,262 + QEN71_RS08640 0.30 -2.2 1,933,262 + QEN71_RS08640 0.30 +0.1 1,933,262 + QEN71_RS08640 0.30 -1.6 1,933,262 + QEN71_RS08640 0.30 +0.4 1,933,263 - QEN71_RS08640 0.30 +0.4 1,933,263 - QEN71_RS08640 0.30 +1.8 1,933,263 - QEN71_RS08640 0.30 -1.7 1,933,263 - QEN71_RS08640 0.30 -0.5 1,933,397 - QEN71_RS08640 0.61 +0.6 1,933,397 - QEN71_RS08640 0.61 -0.0 1,933,490 - QEN71_RS08640 0.83 -0.3 1,933,490 - QEN71_RS08640 0.83 -1.8 1,933,490 - QEN71_RS08640 0.83 -0.0 1,933,490 - QEN71_RS08640 0.83 +1.0 1,933,516 + QEN71_RS08640 0.89 -0.4 1,933,516 + QEN71_RS08640 0.89 -0.1 1,933,516 + QEN71_RS08640 0.89 +0.1 1,933,517 - QEN71_RS08640 0.89 +0.7 1,933,517 - QEN71_RS08640 0.89 +1.3 1,933,517 - QEN71_RS08640 0.89 +2.0 1,933,517 - QEN71_RS08640 0.89 -1.7 1,933,517 - QEN71_RS08640 0.89 +0.8 1,933,560 - -0.1 1,933,560 - +0.4 1,933,657 + -1.8 1,933,657 + -0.2 1,933,657 + +0.4 1,933,657 + -1.0 1,933,657 + -1.4 1,933,657 + +0.0 1,933,657 + -0.7 1,933,657 + -2.2 1,933,657 + -2.9 1,933,657 + -0.6 1,933,657 + -0.6 1,933,657 + -1.2 1,933,658 - -0.7 1,933,658 - -1.9 1,933,658 - -0.4 1,933,658 - +0.1 1,933,658 - +0.7 1,933,658 - +0.7 1,933,658 - -1.6 1,933,659 + +0.5 1,933,659 + +0.4 1,933,659 + +0.0 1,933,660 - -1.2 1,933,660 - -0.4 1,933,660 - -0.1 1,933,660 - -0.2 1,933,820 + -0.5 1,933,820 + -1.3 1,933,820 + -1.3 1,933,820 + -0.3 1,933,821 - +0.6 1,933,855 + -1.4 1,933,855 + -2.9 1,933,856 - -0.3 1,933,860 + +0.2 1,933,860 + +0.8 1,933,861 - -0.1 1,934,014 + QEN71_RS08645 0.16 -0.8 1,934,015 - QEN71_RS08645 0.16 -0.3 1,934,141 - QEN71_RS08645 0.36 -0.3 1,934,183 - QEN71_RS08645 0.42 -1.1 1,934,183 - QEN71_RS08645 0.42 -0.6 1,934,184 + QEN71_RS08645 0.42 +1.0 1,934,185 - QEN71_RS08645 0.43 +0.6 1,934,502 + +0.9 1,934,533 + +0.4 1,934,533 + -0.8 1,934,534 - -1.7 1,934,552 - +1.4 1,934,552 - +0.1 1,934,552 - -0.1 1,934,552 - +0.2 1,934,552 - +1.8 1,934,554 + -1.1 1,934,555 - -0.9 1,934,555 - +0.0 1,934,582 + +1.1 1,934,583 - -0.4 1,934,806 - QEN71_RS08650 0.28 -0.3 1,934,987 + QEN71_RS08650 0.61 -1.2 1,934,987 + QEN71_RS08650 0.61 -0.3 1,934,987 + QEN71_RS08650 0.61 -0.4 1,934,988 - QEN71_RS08650 0.61 -0.5 1,934,988 - QEN71_RS08650 0.61 -0.6 1,934,988 - QEN71_RS08650 0.61 +1.1 1,934,988 - QEN71_RS08650 0.61 -1.1 1,934,993 + QEN71_RS08650 0.62 -1.0 1,934,993 + QEN71_RS08650 0.62 +2.3 1,934,994 - QEN71_RS08650 0.62 -0.6 1,934,994 - QEN71_RS08650 0.62 +0.1 1,934,994 - QEN71_RS08650 0.62 -0.4 1,934,994 - QEN71_RS08650 0.62 +0.6 1,935,041 + QEN71_RS08650 0.71 +0.7 1,935,042 - QEN71_RS08650 0.71 -1.4 1,935,042 - QEN71_RS08650 0.71 -0.3 1,935,042 - QEN71_RS08650 0.71 +0.9 1,935,042 - QEN71_RS08650 0.71 -1.3 1,935,053 - QEN71_RS08650 0.73 +0.2 1,935,106 + QEN71_RS08650 0.83 -0.1 1,935,106 + QEN71_RS08650 0.83 +0.7 1,935,107 - QEN71_RS08650 0.83 -1.0 1,935,107 - QEN71_RS08650 0.83 -0.1 1,935,107 - QEN71_RS08650 0.83 -1.0 1,935,107 - QEN71_RS08650 0.83 -1.4 1,935,107 - QEN71_RS08650 0.83 +0.3 1,935,181 + +0.7 1,935,181 + -0.2 1,935,213 + -1.6 1,935,213 + +0.3 1,935,214 - +0.1 1,935,214 - -1.5 1,935,328 + -0.8 1,935,398 + QEN71_RS08655 0.16 +0.8 1,935,398 + QEN71_RS08655 0.16 -0.2 1,935,398 + QEN71_RS08655 0.16 -0.2 1,935,399 - QEN71_RS08655 0.17 -0.6 1,935,399 - QEN71_RS08655 0.17 -0.6 1,935,399 - QEN71_RS08655 0.17 -1.3 1,935,399 - QEN71_RS08655 0.17 -1.0 1,935,399 - QEN71_RS08655 0.17 +1.8 1,935,400 + QEN71_RS08655 0.17 -0.8 1,935,401 - QEN71_RS08655 0.17 +0.9 1,935,401 - QEN71_RS08655 0.17 -0.8 1,935,401 - QEN71_RS08655 0.17 +1.0 1,935,401 - QEN71_RS08655 0.17 -2.3 1,935,466 + QEN71_RS08655 0.40 -1.0 1,935,466 + QEN71_RS08655 0.40 -0.9 1,935,466 + QEN71_RS08655 0.40 -1.2 1,935,466 + QEN71_RS08655 0.40 -0.8 1,935,466 + QEN71_RS08655 0.40 -1.1 1,935,466 + QEN71_RS08655 0.40 +0.0 1,935,466 + QEN71_RS08655 0.40 +0.5 1,935,466 + QEN71_RS08655 0.40 -0.3 1,935,466 + QEN71_RS08655 0.40 +0.3 1,935,466 + QEN71_RS08655 0.40 -0.3 1,935,467 - QEN71_RS08655 0.40 -1.9 1,935,467 - QEN71_RS08655 0.40 -0.4 1,935,467 - QEN71_RS08655 0.40 +0.2 1,935,467 - QEN71_RS08655 0.40 +1.4 1,935,467 - QEN71_RS08655 0.40 -0.6 1,935,467 - QEN71_RS08655 0.40 +0.6 1,935,467 - QEN71_RS08655 0.40 +0.4 1,935,467 - QEN71_RS08655 0.40 -1.4 1,935,467 - QEN71_RS08655 0.40 +2.0 1,935,467 - QEN71_RS08655 0.40 -0.8 1,935,467 - QEN71_RS08655 0.40 -0.6 1,935,467 - QEN71_RS08655 0.40 -0.4 1,935,467 - QEN71_RS08655 0.40 +0.6 1,935,470 + QEN71_RS08655 0.41 +0.0 1,935,484 + QEN71_RS08655 0.46 +0.2 1,935,484 + QEN71_RS08655 0.46 -1.9 1,935,513 + QEN71_RS08655 0.56 -0.7 1,935,514 + QEN71_RS08655 0.57 -0.5 1,935,514 + QEN71_RS08655 0.57 -0.8 1,935,514 + QEN71_RS08655 0.57 +0.3 1,935,514 + QEN71_RS08655 0.57 +0.6 1,935,514 + QEN71_RS08655 0.57 +0.6 1,935,515 - QEN71_RS08655 0.57 +0.7 1,935,515 - QEN71_RS08655 0.57 -1.6 1,935,515 - QEN71_RS08655 0.57 -0.1 1,935,550 + QEN71_RS08655 0.69 +0.3 1,935,550 + QEN71_RS08655 0.69 -0.6 1,935,550 + QEN71_RS08655 0.69 -0.2 1,935,551 - QEN71_RS08655 0.69 -0.1
Or see this region's nucleotide sequence