Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS06505

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,444,010	-		QEN71_RS06500	0.56	+2.0
1,444,010	-		QEN71_RS06500	0.56	-1.0
1,444,232	-		QEN71_RS06500	0.83	+0.9
1,444,354	-				+0.4
1,444,354	-				-1.0
1,444,354	-				-1.3
1,444,483	+				+1.4
1,444,484	-				-0.6
1,444,484	-				-0.2
1,444,484	-				+0.1
1,444,484	-				+1.4
1,444,484	-				+0.2
1,444,506	+				-0.5
1,444,507	-				-2.4
1,444,507	-				-2.1
1,444,531	+				-0.1
1,444,531	+				+0.7
1,444,531	+				+0.8
1,444,531	+				+0.7
1,444,531	+				-0.8
1,444,531	+				-0.5
1,444,532	-				-1.7
1,444,532	-				-1.9
1,444,535	+				-1.7
1,444,535	+				-1.2
1,444,535	+				-0.8
1,444,535	+				-0.9
1,444,536	-				+0.4
1,444,574	+				-0.9
1,444,575	-				+1.2
1,444,750	+				-1.8
1,444,751	-				-3.2
1,444,751	-				-0.8
1,444,751	-				-1.9
1,444,760	+				-3.0
1,444,760	+				-2.2
1,444,760	+				-1.2
1,444,760	+				-1.2
1,444,760	+				-2.7
1,444,760	+				-1.7
1,444,760	+				+0.2
1,444,760	+				-1.3
1,444,760	+				+0.6
1,444,761	-				-0.2
1,444,761	-				-3.2
1,444,766	+				-2.2
1,444,766	+				-1.8
1,444,767	-				-1.9
1,444,767	-				-1.4
1,444,775	+				-2.5
1,444,775	+				-1.8
1,444,784	+				-3.1
1,444,784	+				-1.9
1,444,785	-				-2.0
1,444,797	+				-0.8
1,444,797	+				-1.4
1,444,797	+				-1.6
1,444,797	+				-0.2
1,444,797	+				-4.6
1,444,797	+				-1.4
1,444,797	+				-2.9
1,444,797	+				+0.2
1,444,797	+				-2.5
1,444,798	-				-1.4
1,444,798	-				-1.0
1,444,798	-				-2.8
1,444,798	-				-1.7
1,444,798	-				-2.2
1,444,798	-				-2.4
1,444,801	+				-0.4
1,444,801	+				-1.2
1,444,801	+				-0.8
1,444,801	+				-0.4
1,444,801	+				-1.0
1,444,802	-				-1.7
1,444,802	-				-2.3
1,444,802	-				-2.3
1,444,802	-				-2.4
1,445,214	+		QEN71_RS06505	0.19	-2.8
1,445,214	+		QEN71_RS06505	0.19	-2.7
1,445,214	+		QEN71_RS06505	0.19	-3.0
1,445,215	-		QEN71_RS06505	0.19	-1.3
1,445,277	+		QEN71_RS06505	0.21	-1.2
1,445,277	+		QEN71_RS06505	0.21	-3.2
1,445,277	+		QEN71_RS06505	0.21	-3.1
1,445,448	+		QEN71_RS06505	0.29	-0.4
1,445,448	+		QEN71_RS06505	0.29	-2.9
1,445,449	-		QEN71_RS06505	0.29	-1.6
1,445,499	+		QEN71_RS06505	0.31	-1.9
1,445,499	+		QEN71_RS06505	0.31	-1.8
1,445,500	-		QEN71_RS06505	0.31	-1.7
1,445,500	-		QEN71_RS06505	0.31	-0.7
1,445,685	+		QEN71_RS06505	0.38	-0.9
1,446,165	+		QEN71_RS06505	0.58	-1.4
1,446,165	+		QEN71_RS06505	0.58	-1.6
1,446,165	+		QEN71_RS06505	0.58	-1.7
1,446,166	-		QEN71_RS06505	0.58	-0.4
1,446,166	-		QEN71_RS06505	0.58	-0.9
1,446,166	-		QEN71_RS06505	0.58	-0.7
1,446,166	-		QEN71_RS06505	0.58	-2.0
1,446,441	+		QEN71_RS06505	0.70	-1.6
1,446,441	+		QEN71_RS06505	0.70	-1.4
1,446,442	-		QEN71_RS06505	0.70	-2.1
1,446,442	-		QEN71_RS06505	0.70	-0.5
1,446,489	+		QEN71_RS06505	0.72	-1.9
1,446,537	+		QEN71_RS06505	0.74	-2.4
1,446,615	+		QEN71_RS06505	0.77	-3.1
1,446,615	+		QEN71_RS06505	0.77	-2.0
1,446,615	+		QEN71_RS06505	0.77	-3.0
1,446,725	+		QEN71_RS06505	0.82	-0.2
1,446,769	-		QEN71_RS06505	0.83	-1.4
1,446,769	-		QEN71_RS06505	0.83	-0.7
1,446,769	-		QEN71_RS06505	0.83	-0.7
1,446,769	-		QEN71_RS06505	0.83	-1.0
1,447,023	+				-2.3
1,447,023	+				-2.0
1,447,023	+				-0.7
1,447,023	+				-1.6
1,447,024	-				-1.7
1,447,024	-				-1.9
1,447,130	+				-2.9
1,447,130	+				-2.0
1,447,131	-				-1.8
1,447,131	-				-2.2
1,447,131	-				-2.9
1,447,164	+				+0.2
1,447,164	+				-0.5
1,447,165	-				+1.6
1,447,165	-				+0.9
1,447,165	-				-0.3
1,447,165	-				-0.8
1,447,197	+				-0.6
1,447,197	+				+1.4
1,447,197	+				-1.0
1,447,197	+				+0.5
1,447,197	+				+0.2
1,447,197	+				-1.0
1,447,197	+				-1.5
1,447,198	-				+1.2
1,447,198	-				-1.4
1,447,203	+				+0.1
1,447,203	+				+0.6
1,447,203	+				-0.2
1,447,203	+				-0.6
1,447,203	+				-0.0
1,447,203	+				+1.2
1,447,204	-				-0.1
1,447,204	-				-0.6
1,447,204	-				-1.7
1,447,204	-				+0.2
1,447,207	+				+0.7
1,447,207	+				+1.2
1,447,207	+				-0.9
1,447,207	+				+0.5
1,447,208	-				-2.1
1,447,208	-				-0.2
1,447,208	-				+0.2
1,447,208	-				-0.9
1,447,208	-				-0.7
1,447,229	+				-0.1
1,447,230	-				-0.8
1,447,230	-				-0.5
1,447,250	+				-0.0
1,447,250	+				+0.3
1,447,250	+				-0.4
1,447,250	+				+0.2
1,447,251	-				-0.1
1,447,251	-				+0.2
1,447,251	-				-0.3
1,447,252	+				+1.0
1,447,252	+				-0.1
1,447,252	+				+0.7
1,447,252	+				-0.4
1,447,252	+				+0.9
1,447,252	+				+1.3
1,447,252	+				-0.2
1,447,252	-				-0.3
1,447,253	-				+0.9
1,447,253	-				-0.1
1,447,253	-				-0.2
1,447,253	-				-0.7
1,447,253	-				-0.1
1,447,265	-				+0.0
1,447,373	+		QEN71_RS06510	0.17	-2.8
1,447,373	+		QEN71_RS06510	0.17	-0.9
1,447,373	+		QEN71_RS06510	0.17	+0.4
1,447,373	+		QEN71_RS06510	0.17	-2.6
1,447,373	+		QEN71_RS06510	0.17	-0.7
1,447,373	+		QEN71_RS06510	0.17	+2.0
1,447,373	+		QEN71_RS06510	0.17	-1.2
1,447,373	+		QEN71_RS06510	0.17	+0.1
1,447,373	+		QEN71_RS06510	0.17	-0.6
1,447,373	+		QEN71_RS06510	0.17	+0.2
1,447,373	+		QEN71_RS06510	0.17	-1.3
1,447,373	+		QEN71_RS06510	0.17	+1.2
1,447,373	+		QEN71_RS06510	0.17	+0.5
1,447,373	+		QEN71_RS06510	0.17	+1.2
1,447,374	-		QEN71_RS06510	0.17	-1.1
1,447,374	-		QEN71_RS06510	0.17	-0.4
1,447,374	-		QEN71_RS06510	0.17	-1.4
1,447,543	+		QEN71_RS06510	0.54	-0.1
1,447,543	+		QEN71_RS06510	0.54	-0.8
1,447,543	+		QEN71_RS06510	0.54	+2.4
1,447,544	-		QEN71_RS06510	0.54	-0.4
1,447,544	-		QEN71_RS06510	0.54	-1.9
1,447,544	-		QEN71_RS06510	0.54	-0.8
1,447,544	-		QEN71_RS06510	0.54	-1.2
1,447,544	-		QEN71_RS06510	0.54	-0.2
1,447,619	+		QEN71_RS06510	0.71	-0.0
1,447,619	+		QEN71_RS06510	0.71	+1.0
1,447,620	-		QEN71_RS06510	0.71	-0.1
1,447,679	+		QEN71_RS06510	0.84	+0.7
1,447,680	-		QEN71_RS06510	0.84	-0.0
1,447,763	+				-0.9
1,447,763	+				-0.9
1,447,763	+				+0.6
1,447,763	+				-1.1
1,447,763	+				+0.3
1,447,763	+				-0.3
1,447,763	+				+0.6
1,447,763	+				+2.5
1,447,763	+				+0.9
1,447,763	+				-0.0
1,447,764	-				-0.8
1,447,764	-				-0.6
1,447,764	-				-0.4
1,447,764	-				+0.3
1,447,764	-				-0.8
1,447,764	-				+1.2
1,447,872	+				-0.7
1,447,872	+				-1.1
1,447,872	+				+0.2
1,447,873	-				-0.0
1,447,873	-				-1.8
1,447,873	-				-1.3
1,447,873	-				-0.5
1,448,018	+		QEN71_RS06515	0.19	-0.7
1,448,019	-		QEN71_RS06515	0.19	+0.3
1,448,019	-		QEN71_RS06515	0.19	+2.2
1,448,111	+		QEN71_RS06515	0.29	+0.3
1,448,111	+		QEN71_RS06515	0.29	-0.4
1,448,112	-		QEN71_RS06515	0.29	-1.1
1,448,112	-		QEN71_RS06515	0.29	-1.8
1,448,144	+		QEN71_RS06515	0.33	-1.4
1,448,144	+		QEN71_RS06515	0.33	+0.9
1,448,145	-		QEN71_RS06515	0.33	+0.7
1,448,145	-		QEN71_RS06515	0.33	-0.1
1,448,145	-		QEN71_RS06515	0.33	+0.1