Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS06450 and QEN71_RS06455 are separated by 7 nucleotides QEN71_RS06455 and QEN71_RS06460 are separated by 65 nucleotides
QEN71_RS06450: QEN71_RS06450 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 1,432,399 to 1,433,604
_RS06450
QEN71_RS06455: QEN71_RS06455 - RIP metalloprotease RseP, at 1,433,612 to 1,435,000
_RS06455
QEN71_RS06460: QEN71_RS06460 - outer membrane protein assembly factor BamA, at 1,435,066 to 1,437,378
_RS06460
Position (kb)
1433
1434
1435
1436 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1433.611 kb on + strand at 1433.678 kb on + strand at 1433.678 kb on + strand at 1433.678 kb on + strand at 1433.679 kb on - strand at 1433.687 kb on + strand at 1433.687 kb on + strand at 1433.688 kb on - strand at 1433.688 kb on - strand at 1433.816 kb on + strand, within QEN71_RS06455 at 1434.246 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.413 kb on + strand, within QEN71_RS06455 at 1434.414 kb on - strand, within QEN71_RS06455 at 1434.414 kb on - strand, within QEN71_RS06455 at 1434.414 kb on - strand, within QEN71_RS06455 at 1434.414 kb on - strand, within QEN71_RS06455 at 1434.414 kb on - strand, within QEN71_RS06455 at 1434.489 kb on + strand, within QEN71_RS06455 at 1434.498 kb on + strand, within QEN71_RS06455 at 1434.498 kb on + strand, within QEN71_RS06455 at 1434.656 kb on + strand, within QEN71_RS06455 at 1434.737 kb on + strand, within QEN71_RS06455 at 1434.801 kb on + strand, within QEN71_RS06455 at 1434.801 kb on + strand, within QEN71_RS06455 at 1434.801 kb on + strand, within QEN71_RS06455 at 1434.801 kb on + strand, within QEN71_RS06455 at 1434.801 kb on + strand, within QEN71_RS06455 at 1434.801 kb on + strand, within QEN71_RS06455 at 1434.825 kb on + strand, within QEN71_RS06455 at 1434.825 kb on + strand, within QEN71_RS06455 at 1434.825 kb on + strand, within QEN71_RS06455 at 1434.858 kb on + strand, within QEN71_RS06455 at 1434.858 kb on + strand, within QEN71_RS06455 at 1434.858 kb on + strand, within QEN71_RS06455 at 1434.858 kb on + strand, within QEN71_RS06455 at 1434.860 kb on + strand, within QEN71_RS06455 at 1434.860 kb on + strand, within QEN71_RS06455 at 1434.860 kb on + strand, within QEN71_RS06455 at 1434.863 kb on + strand at 1434.863 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.940 kb on + strand at 1434.987 kb on + strand at 1434.987 kb on + strand at 1434.998 kb on + strand at 1435.045 kb on + strand at 1435.045 kb on + strand at 1435.045 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 1,433,611 + +0.6 1,433,678 + -1.2 1,433,678 + -1.3 1,433,678 + +0.1 1,433,679 - -0.4 1,433,687 + -2.3 1,433,687 + -0.0 1,433,688 - -0.9 1,433,688 - -0.7 1,433,816 + QEN71_RS06455 0.15 -1.0 1,434,246 + QEN71_RS06455 0.46 +0.6 1,434,413 + QEN71_RS06455 0.58 -1.1 1,434,413 + QEN71_RS06455 0.58 -0.9 1,434,413 + QEN71_RS06455 0.58 -2.5 1,434,413 + QEN71_RS06455 0.58 -2.2 1,434,413 + QEN71_RS06455 0.58 -1.8 1,434,413 + QEN71_RS06455 0.58 -2.6 1,434,413 + QEN71_RS06455 0.58 -1.4 1,434,413 + QEN71_RS06455 0.58 -0.0 1,434,414 - QEN71_RS06455 0.58 +1.1 1,434,414 - QEN71_RS06455 0.58 -3.3 1,434,414 - QEN71_RS06455 0.58 -1.3 1,434,414 - QEN71_RS06455 0.58 +2.5 1,434,414 - QEN71_RS06455 0.58 -0.2 1,434,489 + QEN71_RS06455 0.63 -1.1 1,434,498 + QEN71_RS06455 0.64 -1.9 1,434,498 + QEN71_RS06455 0.64 +0.1 1,434,656 + QEN71_RS06455 0.75 -1.4 1,434,737 + QEN71_RS06455 0.81 -0.2 1,434,801 + QEN71_RS06455 0.86 +0.1 1,434,801 + QEN71_RS06455 0.86 -1.7 1,434,801 + QEN71_RS06455 0.86 -2.3 1,434,801 + QEN71_RS06455 0.86 -2.5 1,434,801 + QEN71_RS06455 0.86 -2.2 1,434,801 + QEN71_RS06455 0.86 -1.1 1,434,825 + QEN71_RS06455 0.87 -1.4 1,434,825 + QEN71_RS06455 0.87 -3.1 1,434,825 + QEN71_RS06455 0.87 -1.6 1,434,858 + QEN71_RS06455 0.90 -1.4 1,434,858 + QEN71_RS06455 0.90 -2.6 1,434,858 + QEN71_RS06455 0.90 -1.8 1,434,858 + QEN71_RS06455 0.90 -2.7 1,434,860 + QEN71_RS06455 0.90 -1.5 1,434,860 + QEN71_RS06455 0.90 -1.4 1,434,860 + QEN71_RS06455 0.90 -2.2 1,434,863 + -1.3 1,434,863 + -1.4 1,434,940 + -1.0 1,434,940 + -1.2 1,434,940 + -2.9 1,434,940 + -1.7 1,434,940 + -0.6 1,434,940 + -2.0 1,434,940 + -3.6 1,434,940 + -2.0 1,434,940 + -1.4 1,434,940 + -1.4 1,434,940 + -3.3 1,434,987 + -1.3 1,434,987 + -0.2 1,434,998 + -2.1 1,435,045 + -0.6 1,435,045 + +0.1 1,435,045 + -0.3
Or see this region's nucleotide sequence