Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS04575

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,003,278	-		QEN71_RS04570	0.28	-1.0
1,003,450	+		QEN71_RS04570	0.64	+0.7
1,003,450	+		QEN71_RS04570	0.64	+1.2
1,003,450	+		QEN71_RS04570	0.64	+1.0
1,003,451	-		QEN71_RS04570	0.64	-0.0
1,003,660	+				+0.0
1,003,660	+				-0.8
1,003,660	+				-1.4
1,003,661	-				-1.6
1,003,661	-				-2.2
1,003,661	-				+0.1
1,003,661	-				+0.7
1,003,669	+				+0.2
1,003,669	+				+0.1
1,003,669	+				-1.4
1,003,688	-				+0.0
1,003,712	+				+1.4
1,003,712	+				+1.6
1,003,712	+				+0.7
1,003,712	+				+1.4
1,003,712	+				+1.0
1,003,713	-				-1.9
1,003,713	-				+2.1
1,003,713	-				+1.2
1,003,728	+				+0.6
1,003,728	+				+1.1
1,003,729	-				+0.1
1,003,752	+				-1.1
1,003,774	+				-1.0
1,003,774	+				-0.6
1,003,774	+				+0.1
1,003,775	-				+0.1
1,003,775	-				+0.1
1,003,842	+		QEN71_RS04575	0.14	-0.9
1,003,842	+		QEN71_RS04575	0.14	-1.1
1,003,842	+		QEN71_RS04575	0.14	-0.2
1,003,842	+		QEN71_RS04575	0.14	+0.1
1,003,842	+		QEN71_RS04575	0.14	-1.9
1,003,843	-		QEN71_RS04575	0.14	-0.5
1,003,971	+		QEN71_RS04575	0.35	-0.5
1,003,971	+		QEN71_RS04575	0.35	+1.1
1,003,971	+		QEN71_RS04575	0.35	+0.1
1,003,971	+		QEN71_RS04575	0.35	-0.9
1,003,971	+		QEN71_RS04575	0.35	-0.7
1,003,972	-		QEN71_RS04575	0.36	+0.1
1,003,973	+		QEN71_RS04575	0.36	-1.6
1,003,973	+		QEN71_RS04575	0.36	-1.7
1,003,973	+		QEN71_RS04575	0.36	-1.2
1,003,973	+		QEN71_RS04575	0.36	-0.5
1,003,973	+		QEN71_RS04575	0.36	-0.2
1,003,973	+		QEN71_RS04575	0.36	-1.1
1,003,973	+		QEN71_RS04575	0.36	-1.9
1,003,974	-		QEN71_RS04575	0.36	-0.8
1,003,974	-		QEN71_RS04575	0.36	-0.7
1,003,983	+		QEN71_RS04575	0.38	-0.2
1,003,984	-		QEN71_RS04575	0.38	-1.5
1,004,000	+		QEN71_RS04575	0.40	+0.9
1,004,001	-		QEN71_RS04575	0.41	+0.1
1,004,013	+		QEN71_RS04575	0.42	-1.1
1,004,014	-		QEN71_RS04575	0.43	-1.6
1,004,014	-		QEN71_RS04575	0.43	-0.7
1,004,098	+		QEN71_RS04575	0.57	+0.1
1,004,098	+		QEN71_RS04575	0.57	-0.9
1,004,098	+		QEN71_RS04575	0.57	-0.6
1,004,098	+		QEN71_RS04575	0.57	-0.9
1,004,098	+		QEN71_RS04575	0.57	-0.5
1,004,098	+		QEN71_RS04575	0.57	+0.5
1,004,098	+		QEN71_RS04575	0.57	-0.5
1,004,099	-		QEN71_RS04575	0.57	-0.5
1,004,099	-		QEN71_RS04575	0.57	+0.1
1,004,106	-		QEN71_RS04575	0.58	-1.2
1,004,177	-		QEN71_RS04575	0.70	-0.2
1,004,200	+		QEN71_RS04575	0.74	-1.6
1,004,200	+		QEN71_RS04575	0.74	-0.2
1,004,201	-		QEN71_RS04575	0.74	-2.1
1,004,201	-		QEN71_RS04575	0.74	-0.2
1,004,229	+		QEN71_RS04575	0.79	-0.9
1,004,229	+		QEN71_RS04575	0.79	+0.1
1,004,229	+		QEN71_RS04575	0.79	+0.3
1,004,229	+		QEN71_RS04575	0.79	+0.1
1,004,230	-		QEN71_RS04575	0.79	+0.1
1,004,363	+				+1.1
1,004,363	+				+0.7
1,004,363	+				-0.1
1,004,363	+				+1.0
1,004,363	+				-0.9
1,004,363	+				+1.0
1,004,363	+				+1.5
1,004,363	+				-0.6
1,004,363	+				+0.8
1,004,363	+				+0.3
1,004,364	-				+0.7
1,004,364	-				+0.9
1,004,364	-				+1.4
1,004,364	-				+2.2
1,004,364	-				+1.9
1,004,364	-				+1.1
1,004,402	+				+0.2
1,004,402	+				-0.4
1,004,402	+				-0.7
1,004,402	+				+0.1
1,004,411	+				+0.5
1,004,411	+				+0.8
1,004,411	+				+0.7
1,004,411	+				+1.2
1,004,411	+				+1.4
1,004,411	+				+0.9
1,004,411	+				+1.6
1,004,411	+				+0.5
1,004,412	-				+1.9
1,004,412	-				+1.9
1,004,609	+		QEN71_RS04580	0.24	+0.1
1,004,609	+		QEN71_RS04580	0.24	+1.8
1,004,609	+		QEN71_RS04580	0.24	+1.9
1,004,609	+		QEN71_RS04580	0.24	+2.4
1,004,610	-		QEN71_RS04580	0.24	+0.6
1,004,610	-		QEN71_RS04580	0.24	+1.1
1,004,610	-		QEN71_RS04580	0.24	+1.3
1,004,610	-		QEN71_RS04580	0.24	+2.1
1,004,718	+		QEN71_RS04580	0.41	-1.3
1,004,718	+		QEN71_RS04580	0.41	-3.4
1,004,718	+		QEN71_RS04580	0.41	-1.1
1,004,718	+		QEN71_RS04580	0.41	-0.0
1,004,718	+		QEN71_RS04580	0.41	-1.2
1,004,718	+		QEN71_RS04580	0.41	-0.9
1,004,718	+		QEN71_RS04580	0.41	+1.1
1,004,718	+		QEN71_RS04580	0.41	-0.2
1,004,718	+		QEN71_RS04580	0.41	-0.2
1,004,718	+		QEN71_RS04580	0.41	-3.7
1,004,718	+		QEN71_RS04580	0.41	-0.9
1,004,718	+		QEN71_RS04580	0.41	-2.1
1,004,718	+		QEN71_RS04580	0.41	-1.4
1,004,718	+		QEN71_RS04580	0.41	+0.3
1,004,718	+		QEN71_RS04580	0.41	-1.3
1,004,719	-		QEN71_RS04580	0.41	-0.8
1,004,719	-		QEN71_RS04580	0.41	+1.7
1,004,719	-		QEN71_RS04580	0.41	+0.6
1,004,719	-		QEN71_RS04580	0.41	+0.9
1,004,719	-		QEN71_RS04580	0.41	+0.3
1,004,719	-		QEN71_RS04580	0.41	+1.5
1,004,719	-		QEN71_RS04580	0.41	+1.0
1,004,719	-		QEN71_RS04580	0.41	+0.3
1,004,719	-		QEN71_RS04580	0.41	+0.4
1,004,852	-		QEN71_RS04580	0.62	+2.2
1,004,999	+		QEN71_RS04580	0.85	-2.5
1,004,999	+		QEN71_RS04580	0.85	-0.5
1,004,999	+		QEN71_RS04580	0.85	-2.4
1,004,999	+		QEN71_RS04580	0.85	-1.2
1,004,999	+		QEN71_RS04580	0.85	-1.0
1,005,000	-		QEN71_RS04580	0.85	-1.2
1,005,000	-		QEN71_RS04580	0.85	+0.3
1,005,000	-		QEN71_RS04580	0.85	-0.1
1,005,092	+				+3.1
1,005,092	+				-0.4
1,005,092	+				-1.6
1,005,092	+				+0.7
1,005,092	+				-0.1
1,005,093	-				+1.8
1,005,093	-				+0.1
1,005,093	-				-3.2
1,005,128	+				+1.4
1,005,128	+				+1.4
1,005,129	-				+0.8
1,005,129	-				+0.5
1,005,129	-				+2.1
1,005,183	-				+0.3
1,005,183	-				+1.4
1,005,191	+				+1.0
1,005,192	-				-0.7
1,005,192	-				+1.2
1,005,279	+		QEN71_RS04585	0.17	+0.1
1,005,279	+		QEN71_RS04585	0.17	+0.8
1,005,279	+		QEN71_RS04585	0.17	+1.2
1,005,279	+		QEN71_RS04585	0.17	+1.8
1,005,279	+		QEN71_RS04585	0.17	+0.3
1,005,279	+		QEN71_RS04585	0.17	+0.6
1,005,280	-		QEN71_RS04585	0.17	+2.4
1,005,280	-		QEN71_RS04585	0.17	+1.5
1,005,280	-		QEN71_RS04585	0.17	+1.5
1,005,297	+		QEN71_RS04585	0.19	+3.8
1,005,298	-		QEN71_RS04585	0.19	+0.8
1,005,298	-		QEN71_RS04585	0.19	+0.1
1,005,298	-		QEN71_RS04585	0.19	+0.5
1,005,316	+		QEN71_RS04585	0.21	+0.6
1,005,317	-		QEN71_RS04585	0.21	+0.8
1,005,317	-		QEN71_RS04585	0.21	+1.6
1,005,317	-		QEN71_RS04585	0.21	+2.1
1,005,339	+		QEN71_RS04585	0.23	+1.1
1,005,340	-		QEN71_RS04585	0.23	-0.0