Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS04065 and QEN71_RS04070 are separated by 69 nucleotides QEN71_RS04070 and QEN71_RS04075 are separated by 73 nucleotides
QEN71_RS04065: QEN71_RS04065 - 3-phosphoserine/phosphohydroxythreonine transaminase, at 900,272 to 901,354
_RS04065
QEN71_RS04070: QEN71_RS04070 - prephenate dehydratase, at 901,424 to 902,506
_RS04070
QEN71_RS04075: QEN71_RS04075 - histidinol-phosphate transaminase, at 902,580 to 903,695
_RS04075
Position (kb) 901
902
903 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 900.605 kb on + strand, within QEN71_RS04065 at 900.605 kb on + strand, within QEN71_RS04065 at 900.605 kb on + strand, within QEN71_RS04065 at 900.605 kb on + strand, within QEN71_RS04065 at 900.701 kb on + strand, within QEN71_RS04065 at 900.701 kb on + strand, within QEN71_RS04065 at 900.701 kb on + strand, within QEN71_RS04065 at 900.769 kb on + strand, within QEN71_RS04065 at 900.769 kb on + strand, within QEN71_RS04065 at 900.769 kb on + strand, within QEN71_RS04065 at 900.769 kb on + strand, within QEN71_RS04065 at 900.830 kb on + strand, within QEN71_RS04065 at 900.830 kb on + strand, within QEN71_RS04065 at 900.830 kb on + strand, within QEN71_RS04065 at 900.830 kb on + strand, within QEN71_RS04065 at 900.862 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.977 kb on + strand, within QEN71_RS04065 at 900.995 kb on + strand, within QEN71_RS04065 at 900.995 kb on + strand, within QEN71_RS04065 at 900.995 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.004 kb on + strand, within QEN71_RS04065 at 901.094 kb on + strand, within QEN71_RS04065 at 901.094 kb on + strand, within QEN71_RS04065 at 901.094 kb on + strand, within QEN71_RS04065 at 901.094 kb on + strand, within QEN71_RS04065 at 901.094 kb on + strand, within QEN71_RS04065 at 901.164 kb on + strand, within QEN71_RS04065 at 901.164 kb on + strand, within QEN71_RS04065 at 901.164 kb on + strand, within QEN71_RS04065 at 901.164 kb on + strand, within QEN71_RS04065 at 901.322 kb on + strand at 901.322 kb on + strand at 901.322 kb on + strand at 901.322 kb on + strand at 901.322 kb on + strand at 901.417 kb on + strand at 901.417 kb on + strand at 901.417 kb on + strand at 901.417 kb on + strand at 901.417 kb on + strand at 901.709 kb on + strand, within QEN71_RS04070 at 901.730 kb on + strand, within QEN71_RS04070 at 901.730 kb on + strand, within QEN71_RS04070 at 901.730 kb on + strand, within QEN71_RS04070 at 901.730 kb on + strand, within QEN71_RS04070 at 901.730 kb on + strand, within QEN71_RS04070 at 901.754 kb on + strand, within QEN71_RS04070 at 902.249 kb on + strand, within QEN71_RS04070 at 902.384 kb on + strand, within QEN71_RS04070 at 902.384 kb on + strand, within QEN71_RS04070 at 902.384 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.387 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.393 kb on + strand, within QEN71_RS04070 at 902.478 kb on + strand at 902.478 kb on + strand at 902.478 kb on + strand at 902.489 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.561 kb on + strand at 902.565 kb on + strand at 902.565 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.575 kb on + strand at 902.604 kb on + strand at 902.604 kb on + strand at 902.604 kb on + strand at 902.604 kb on + strand at 902.604 kb on + strand at 902.604 kb on + strand at 902.604 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.625 kb on + strand at 902.823 kb on + strand, within QEN71_RS04075 at 902.823 kb on + strand, within QEN71_RS04075 at 902.823 kb on + strand, within QEN71_RS04075 at 902.823 kb on + strand, within QEN71_RS04075 at 902.823 kb on + strand, within QEN71_RS04075 at 902.823 kb on + strand, within QEN71_RS04075 at 902.931 kb on + strand, within QEN71_RS04075 at 902.931 kb on + strand, within QEN71_RS04075 at 902.931 kb on + strand, within QEN71_RS04075 at 902.946 kb on + strand, within QEN71_RS04075 at 902.946 kb on + strand, within QEN71_RS04075 at 902.946 kb on + strand, within QEN71_RS04075 at 902.946 kb on + strand, within QEN71_RS04075 at 902.946 kb on + strand, within QEN71_RS04075 at 903.003 kb on + strand, within QEN71_RS04075 at 903.003 kb on + strand, within QEN71_RS04075 at 903.168 kb on + strand, within QEN71_RS04075 at 903.168 kb on + strand, within QEN71_RS04075 at 903.177 kb on + strand, within QEN71_RS04075 at 903.177 kb on + strand, within QEN71_RS04075 at 903.177 kb on + strand, within QEN71_RS04075 at 903.438 kb on + strand, within QEN71_RS04075 at 903.480 kb on + strand, within QEN71_RS04075 at 903.480 kb on + strand, within QEN71_RS04075 at 903.480 kb on + strand, within QEN71_RS04075 at 903.480 kb on + strand, within QEN71_RS04075 at 903.480 kb on + strand, within QEN71_RS04075 at 903.480 kb on + strand, within QEN71_RS04075
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 900,605 + QEN71_RS04065 0.31 -3.4 900,605 + QEN71_RS04065 0.31 -2.1 900,605 + QEN71_RS04065 0.31 -1.6 900,605 + QEN71_RS04065 0.31 -3.1 900,701 + QEN71_RS04065 0.40 -0.9 900,701 + QEN71_RS04065 0.40 -2.2 900,701 + QEN71_RS04065 0.40 -3.7 900,769 + QEN71_RS04065 0.46 -4.2 900,769 + QEN71_RS04065 0.46 -2.4 900,769 + QEN71_RS04065 0.46 -2.7 900,769 + QEN71_RS04065 0.46 -3.6 900,830 + QEN71_RS04065 0.52 -5.5 900,830 + QEN71_RS04065 0.52 -4.0 900,830 + QEN71_RS04065 0.52 -2.1 900,830 + QEN71_RS04065 0.52 -3.8 900,862 + QEN71_RS04065 0.54 -2.8 900,977 + QEN71_RS04065 0.65 -3.0 900,977 + QEN71_RS04065 0.65 -4.5 900,977 + QEN71_RS04065 0.65 -1.5 900,977 + QEN71_RS04065 0.65 -0.5 900,977 + QEN71_RS04065 0.65 -3.8 900,977 + QEN71_RS04065 0.65 -4.0 900,977 + QEN71_RS04065 0.65 -2.6 900,977 + QEN71_RS04065 0.65 -4.7 900,995 + QEN71_RS04065 0.67 -3.0 900,995 + QEN71_RS04065 0.67 -3.1 900,995 + QEN71_RS04065 0.67 -3.2 901,004 + QEN71_RS04065 0.68 -3.1 901,004 + QEN71_RS04065 0.68 -1.9 901,004 + QEN71_RS04065 0.68 -1.1 901,004 + QEN71_RS04065 0.68 -3.9 901,004 + QEN71_RS04065 0.68 +0.1 901,004 + QEN71_RS04065 0.68 -4.4 901,004 + QEN71_RS04065 0.68 -0.9 901,004 + QEN71_RS04065 0.68 -2.7 901,004 + QEN71_RS04065 0.68 -2.6 901,004 + QEN71_RS04065 0.68 -5.5 901,004 + QEN71_RS04065 0.68 -1.7 901,004 + QEN71_RS04065 0.68 -1.5 901,094 + QEN71_RS04065 0.76 -4.2 901,094 + QEN71_RS04065 0.76 -2.6 901,094 + QEN71_RS04065 0.76 -1.5 901,094 + QEN71_RS04065 0.76 -0.7 901,094 + QEN71_RS04065 0.76 -4.1 901,164 + QEN71_RS04065 0.82 -3.0 901,164 + QEN71_RS04065 0.82 -3.3 901,164 + QEN71_RS04065 0.82 -0.5 901,164 + QEN71_RS04065 0.82 -4.0 901,322 + -4.4 901,322 + -2.5 901,322 + -3.2 901,322 + -0.5 901,322 + -2.6 901,417 + +1.4 901,417 + +0.3 901,417 + -0.7 901,417 + +0.4 901,417 + -0.9 901,709 + QEN71_RS04070 0.26 -0.7 901,730 + QEN71_RS04070 0.28 -2.5 901,730 + QEN71_RS04070 0.28 -1.4 901,730 + QEN71_RS04070 0.28 -3.9 901,730 + QEN71_RS04070 0.28 -2.3 901,730 + QEN71_RS04070 0.28 -1.1 901,754 + QEN71_RS04070 0.30 -2.6 902,249 + QEN71_RS04070 0.76 -4.3 902,384 + QEN71_RS04070 0.89 -0.7 902,384 + QEN71_RS04070 0.89 -3.2 902,384 + QEN71_RS04070 0.89 +0.4 902,387 + QEN71_RS04070 0.89 -2.5 902,387 + QEN71_RS04070 0.89 -1.8 902,387 + QEN71_RS04070 0.89 +0.1 902,387 + QEN71_RS04070 0.89 -0.9 902,387 + QEN71_RS04070 0.89 -2.2 902,387 + QEN71_RS04070 0.89 -3.5 902,387 + QEN71_RS04070 0.89 -3.6 902,387 + QEN71_RS04070 0.89 -3.0 902,387 + QEN71_RS04070 0.89 -5.0 902,387 + QEN71_RS04070 0.89 -2.6 902,387 + QEN71_RS04070 0.89 -3.6 902,387 + QEN71_RS04070 0.89 -0.5 902,393 + QEN71_RS04070 0.89 -3.5 902,393 + QEN71_RS04070 0.89 -0.7 902,393 + QEN71_RS04070 0.89 -3.2 902,393 + QEN71_RS04070 0.89 -2.0 902,393 + QEN71_RS04070 0.89 -2.3 902,393 + QEN71_RS04070 0.89 -2.5 902,393 + QEN71_RS04070 0.89 -5.1 902,393 + QEN71_RS04070 0.89 -1.3 902,393 + QEN71_RS04070 0.89 -3.4 902,393 + QEN71_RS04070 0.89 -3.9 902,393 + QEN71_RS04070 0.89 -3.8 902,393 + QEN71_RS04070 0.89 +0.1 902,393 + QEN71_RS04070 0.89 -1.1 902,393 + QEN71_RS04070 0.89 -1.6 902,393 + QEN71_RS04070 0.89 -2.5 902,393 + QEN71_RS04070 0.89 -2.6 902,478 + -4.9 902,478 + -5.5 902,478 + +0.1 902,489 + -0.5 902,561 + -0.9 902,561 + +0.7 902,561 + +0.1 902,561 + -0.2 902,561 + -0.8 902,561 + -0.6 902,561 + +0.2 902,561 + -0.5 902,561 + +0.3 902,561 + +0.5 902,561 + -1.9 902,561 + -1.0 902,565 + -0.3 902,565 + -0.7 902,575 + +0.3 902,575 + -0.4 902,575 + +0.5 902,575 + +1.1 902,575 + +0.0 902,575 + -0.0 902,575 + +0.1 902,575 + +0.8 902,575 + +0.7 902,604 + -0.5 902,604 + -0.4 902,604 + -0.1 902,604 + +0.5 902,604 + -1.0 902,604 + -0.6 902,604 + -0.7 902,625 + -1.1 902,625 + -0.3 902,625 + +0.4 902,625 + -0.3 902,625 + -0.7 902,625 + +0.2 902,625 + -0.4 902,625 + -0.6 902,625 + -1.4 902,625 + -1.5 902,625 + -1.3 902,625 + -0.7 902,625 + -0.7 902,625 + -0.4 902,823 + QEN71_RS04075 0.22 -0.2 902,823 + QEN71_RS04075 0.22 +0.5 902,823 + QEN71_RS04075 0.22 -1.7 902,823 + QEN71_RS04075 0.22 -0.7 902,823 + QEN71_RS04075 0.22 +0.5 902,823 + QEN71_RS04075 0.22 -0.7 902,931 + QEN71_RS04075 0.31 -0.4 902,931 + QEN71_RS04075 0.31 +0.4 902,931 + QEN71_RS04075 0.31 -0.7 902,946 + QEN71_RS04075 0.33 +1.8 902,946 + QEN71_RS04075 0.33 +0.1 902,946 + QEN71_RS04075 0.33 +0.1 902,946 + QEN71_RS04075 0.33 +0.0 902,946 + QEN71_RS04075 0.33 +0.7 903,003 + QEN71_RS04075 0.38 +0.1 903,003 + QEN71_RS04075 0.38 -1.3 903,168 + QEN71_RS04075 0.53 +0.7 903,168 + QEN71_RS04075 0.53 +0.5 903,177 + QEN71_RS04075 0.53 +1.5 903,177 + QEN71_RS04075 0.53 +1.1 903,177 + QEN71_RS04075 0.53 -0.5 903,438 + QEN71_RS04075 0.77 +0.3 903,480 + QEN71_RS04075 0.81 -1.5 903,480 + QEN71_RS04075 0.81 -0.7 903,480 + QEN71_RS04075 0.81 +1.3 903,480 + QEN71_RS04075 0.81 +0.9 903,480 + QEN71_RS04075 0.81 +2.1 903,480 + QEN71_RS04075 0.81 +0.0
Or see this region's nucleotide sequence