Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03515 and QEN71_RS03520 are separated by 89 nucleotides QEN71_RS03520 and QEN71_RS03525 are separated by 15 nucleotides QEN71_RS03525 and QEN71_RS03530 are separated by 258 nucleotides
QEN71_RS03515: QEN71_RS03515 - septum site-determining protein MinC, at 786,129 to 786,965
_RS03515
QEN71_RS03520: QEN71_RS03520 - septum site-determining protein MinD, at 787,055 to 787,870
_RS03520
QEN71_RS03525: QEN71_RS03525 - cell division topological specificity factor MinE, at 787,886 to 788,140
_RS03525
QEN71_RS03530: QEN71_RS03530 - YXWGXW repeat-containing protein, at 788,399 to 788,710
_RS03530
Position (kb) 787
788 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 786.062 kb on + strand at 786.062 kb on + strand at 786.063 kb on - strand at 786.063 kb on - strand at 786.063 kb on - strand at 786.099 kb on + strand at 786.099 kb on + strand at 786.100 kb on - strand at 786.100 kb on - strand at 786.105 kb on - strand at 786.128 kb on + strand at 786.128 kb on + strand at 786.128 kb on + strand at 786.128 kb on + strand at 786.129 kb on - strand at 786.129 kb on - strand at 786.129 kb on - strand at 786.129 kb on - strand at 786.679 kb on - strand, within QEN71_RS03515 at 786.752 kb on + strand, within QEN71_RS03515 at 786.752 kb on + strand, within QEN71_RS03515 at 786.752 kb on + strand, within QEN71_RS03515 at 786.752 kb on + strand, within QEN71_RS03515 at 786.753 kb on - strand, within QEN71_RS03515 at 786.753 kb on - strand, within QEN71_RS03515 at 786.753 kb on - strand, within QEN71_RS03515 at 786.753 kb on - strand, within QEN71_RS03515 at 786.756 kb on + strand, within QEN71_RS03515 at 786.757 kb on - strand, within QEN71_RS03515 at 786.757 kb on - strand, within QEN71_RS03515 at 786.757 kb on - strand, within QEN71_RS03515 at 786.757 kb on - strand, within QEN71_RS03515 at 786.757 kb on - strand, within QEN71_RS03515 at 786.971 kb on - strand at 787.023 kb on + strand at 787.023 kb on + strand at 787.046 kb on + strand at 787.046 kb on + strand at 787.046 kb on + strand at 787.054 kb on - strand at 787.054 kb on - strand at 787.054 kb on - strand at 787.054 kb on - strand at 787.226 kb on + strand, within QEN71_RS03520 at 787.226 kb on + strand, within QEN71_RS03520 at 787.226 kb on + strand, within QEN71_RS03520 at 787.226 kb on + strand, within QEN71_RS03520 at 787.227 kb on - strand, within QEN71_RS03520 at 787.227 kb on - strand, within QEN71_RS03520 at 787.400 kb on + strand, within QEN71_RS03520 at 787.400 kb on + strand, within QEN71_RS03520 at 787.400 kb on + strand, within QEN71_RS03520 at 787.401 kb on - strand, within QEN71_RS03520 at 787.401 kb on - strand, within QEN71_RS03520 at 787.401 kb on - strand, within QEN71_RS03520 at 787.401 kb on - strand, within QEN71_RS03520 at 787.401 kb on - strand, within QEN71_RS03520 at 787.401 kb on - strand, within QEN71_RS03520 at 787.601 kb on + strand, within QEN71_RS03520 at 787.601 kb on + strand, within QEN71_RS03520 at 787.601 kb on + strand, within QEN71_RS03520 at 787.601 kb on + strand, within QEN71_RS03520 at 787.602 kb on - strand, within QEN71_RS03520 at 787.602 kb on - strand, within QEN71_RS03520 at 787.769 kb on + strand, within QEN71_RS03520 at 787.769 kb on + strand, within QEN71_RS03520 at 787.769 kb on + strand, within QEN71_RS03520 at 787.770 kb on - strand, within QEN71_RS03520 at 787.770 kb on - strand, within QEN71_RS03520 at 787.770 kb on - strand, within QEN71_RS03520 at 787.819 kb on + strand at 787.826 kb on + strand at 787.826 kb on + strand at 788.166 kb on + strand at 788.166 kb on + strand at 788.166 kb on + strand at 788.166 kb on + strand at 788.166 kb on + strand at 788.167 kb on - strand at 788.167 kb on - strand at 788.167 kb on - strand at 788.167 kb on - strand at 788.167 kb on - strand at 788.314 kb on + strand at 788.314 kb on + strand at 788.555 kb on + strand, within QEN71_RS03530 at 788.555 kb on + strand, within QEN71_RS03530 at 788.555 kb on + strand, within QEN71_RS03530 at 788.556 kb on - strand, within QEN71_RS03530 at 788.556 kb on - strand, within QEN71_RS03530 at 788.556 kb on - strand, within QEN71_RS03530 at 788.556 kb on - strand, within QEN71_RS03530 at 788.597 kb on + strand, within QEN71_RS03530 at 788.639 kb on + strand, within QEN71_RS03530 at 788.639 kb on + strand, within QEN71_RS03530 at 788.741 kb on - strand at 788.794 kb on + strand at 788.794 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 786,062 + +0.3 786,062 + -0.2 786,063 - -0.2 786,063 - -2.1 786,063 - -1.4 786,099 + -0.6 786,099 + -0.4 786,100 - -0.2 786,100 - -0.5 786,105 - -2.3 786,128 + +0.1 786,128 + -0.2 786,128 + -2.0 786,128 + +0.6 786,129 - -0.5 786,129 - +1.1 786,129 - -2.4 786,129 - +1.8 786,679 - QEN71_RS03515 0.66 +0.1 786,752 + QEN71_RS03515 0.74 +1.1 786,752 + QEN71_RS03515 0.74 -1.9 786,752 + QEN71_RS03515 0.74 -2.2 786,752 + QEN71_RS03515 0.74 -0.2 786,753 - QEN71_RS03515 0.75 +1.1 786,753 - QEN71_RS03515 0.75 -1.4 786,753 - QEN71_RS03515 0.75 -1.0 786,753 - QEN71_RS03515 0.75 -0.0 786,756 + QEN71_RS03515 0.75 -0.7 786,757 - QEN71_RS03515 0.75 -0.7 786,757 - QEN71_RS03515 0.75 -0.5 786,757 - QEN71_RS03515 0.75 -3.8 786,757 - QEN71_RS03515 0.75 -0.9 786,757 - QEN71_RS03515 0.75 -1.4 786,971 - -1.4 787,023 + -0.3 787,023 + +0.9 787,046 + -2.3 787,046 + -1.8 787,046 + -0.9 787,054 - -1.5 787,054 - -0.9 787,054 - -0.2 787,054 - -1.4 787,226 + QEN71_RS03520 0.21 -1.1 787,226 + QEN71_RS03520 0.21 -2.2 787,226 + QEN71_RS03520 0.21 -2.3 787,226 + QEN71_RS03520 0.21 -0.8 787,227 - QEN71_RS03520 0.21 -0.5 787,227 - QEN71_RS03520 0.21 -0.2 787,400 + QEN71_RS03520 0.42 -2.6 787,400 + QEN71_RS03520 0.42 -0.5 787,400 + QEN71_RS03520 0.42 -2.2 787,401 - QEN71_RS03520 0.42 -0.5 787,401 - QEN71_RS03520 0.42 -1.6 787,401 - QEN71_RS03520 0.42 -2.7 787,401 - QEN71_RS03520 0.42 -0.7 787,401 - QEN71_RS03520 0.42 -1.5 787,401 - QEN71_RS03520 0.42 -2.2 787,601 + QEN71_RS03520 0.67 -2.9 787,601 + QEN71_RS03520 0.67 -1.9 787,601 + QEN71_RS03520 0.67 -0.7 787,601 + QEN71_RS03520 0.67 -2.5 787,602 - QEN71_RS03520 0.67 +0.1 787,602 - QEN71_RS03520 0.67 -1.6 787,769 + QEN71_RS03520 0.88 -1.2 787,769 + QEN71_RS03520 0.88 -0.7 787,769 + QEN71_RS03520 0.88 -0.5 787,770 - QEN71_RS03520 0.88 -1.6 787,770 - QEN71_RS03520 0.88 -3.0 787,770 - QEN71_RS03520 0.88 -2.0 787,819 + -0.2 787,826 + -0.9 787,826 + -2.0 788,166 + -1.7 788,166 + +0.0 788,166 + -1.1 788,166 + -1.2 788,166 + -0.2 788,167 - -1.7 788,167 - -1.1 788,167 - -3.9 788,167 - -0.8 788,167 - +1.3 788,314 + +0.1 788,314 + +0.8 788,555 + QEN71_RS03530 0.50 -0.7 788,555 + QEN71_RS03530 0.50 +0.4 788,555 + QEN71_RS03530 0.50 -0.5 788,556 - QEN71_RS03530 0.50 -0.7 788,556 - QEN71_RS03530 0.50 -0.1 788,556 - QEN71_RS03530 0.50 -0.2 788,556 - QEN71_RS03530 0.50 -0.0 788,597 + QEN71_RS03530 0.63 -0.7 788,639 + QEN71_RS03530 0.77 +0.1 788,639 + QEN71_RS03530 0.77 -1.2 788,741 - +0.3 788,794 + -1.3 788,794 + +1.3
Or see this region's nucleotide sequence