Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03060 and QEN71_RS03065 overlap by 1 nucleotides QEN71_RS03065 and QEN71_RS03070 are separated by 79 nucleotides QEN71_RS03070 and QEN71_RS03075 are separated by 233 nucleotides QEN71_RS03075 and QEN71_RS03080 are separated by 10 nucleotides QEN71_RS03080 and QEN71_RS03085 are separated by 257 nucleotides
QEN71_RS03060: QEN71_RS03060 - quinolinate synthase NadA, at 684,690 to 685,820
_RS03060
QEN71_RS03065: QEN71_RS03065 - carboxylating nicotinate-nucleotide diphosphorylase, at 685,820 to 686,722
_RS03065
QEN71_RS03070: QEN71_RS03070 - L-aspartate oxidase, at 686,802 to 688,400
_RS03070
QEN71_RS03075: QEN71_RS03075 - 50S ribosomal protein L33, at 688,634 to 688,801
_RS03075
QEN71_RS03080: QEN71_RS03080 - 50S ribosomal protein L28, at 688,812 to 689,045
_RS03080
QEN71_RS03085: QEN71_RS03085 - DNA repair protein RadC, at 689,303 to 690,031
_RS03085
Position (kb) 686
687
688
689 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 685.889 kb on + strand at 685.890 kb on - strand at 686.083 kb on + strand, within QEN71_RS03065 at 686.083 kb on + strand, within QEN71_RS03065 at 686.260 kb on + strand, within QEN71_RS03065 at 686.321 kb on + strand, within QEN71_RS03065 at 686.321 kb on + strand, within QEN71_RS03065 at 686.322 kb on - strand, within QEN71_RS03065 at 686.366 kb on + strand, within QEN71_RS03065 at 686.366 kb on + strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.601 kb on + strand, within QEN71_RS03065 at 686.601 kb on + strand, within QEN71_RS03065 at 686.602 kb on - strand, within QEN71_RS03065 at 686.667 kb on + strand at 686.668 kb on - strand at 686.728 kb on + strand at 686.728 kb on + strand at 686.728 kb on + strand at 686.733 kb on + strand at 686.733 kb on + strand at 686.733 kb on + strand at 686.733 kb on + strand at 686.734 kb on - strand at 686.734 kb on - strand at 686.737 kb on - strand at 686.884 kb on + strand at 686.884 kb on + strand at 686.884 kb on + strand at 686.995 kb on + strand, within QEN71_RS03070 at 686.996 kb on - strand, within QEN71_RS03070 at 686.996 kb on - strand, within QEN71_RS03070 at 686.998 kb on + strand, within QEN71_RS03070 at 686.998 kb on + strand, within QEN71_RS03070 at 686.998 kb on + strand, within QEN71_RS03070 at 686.998 kb on + strand, within QEN71_RS03070 at 686.998 kb on + strand, within QEN71_RS03070 at 686.998 kb on + strand, within QEN71_RS03070 at 686.998 kb on + strand, within QEN71_RS03070 at 686.999 kb on - strand, within QEN71_RS03070 at 687.079 kb on + strand, within QEN71_RS03070 at 687.079 kb on + strand, within QEN71_RS03070 at 687.079 kb on + strand, within QEN71_RS03070 at 687.079 kb on + strand, within QEN71_RS03070 at 687.079 kb on + strand, within QEN71_RS03070 at 687.079 kb on + strand, within QEN71_RS03070 at 687.080 kb on - strand, within QEN71_RS03070 at 687.080 kb on - strand, within QEN71_RS03070 at 687.080 kb on - strand, within QEN71_RS03070 at 687.080 kb on - strand, within QEN71_RS03070 at 687.080 kb on - strand, within QEN71_RS03070 at 687.080 kb on - strand, within QEN71_RS03070 at 687.316 kb on + strand, within QEN71_RS03070 at 687.317 kb on - strand, within QEN71_RS03070 at 687.317 kb on - strand, within QEN71_RS03070 at 687.317 kb on - strand, within QEN71_RS03070 at 687.355 kb on - strand, within QEN71_RS03070 at 687.355 kb on - strand, within QEN71_RS03070 at 687.355 kb on - strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.373 kb on + strand, within QEN71_RS03070 at 687.374 kb on - strand, within QEN71_RS03070 at 687.374 kb on - strand, within QEN71_RS03070 at 687.374 kb on - strand, within QEN71_RS03070 at 687.374 kb on - strand, within QEN71_RS03070 at 687.374 kb on - strand, within QEN71_RS03070 at 687.374 kb on - strand, within QEN71_RS03070 at 687.410 kb on + strand, within QEN71_RS03070 at 687.410 kb on + strand, within QEN71_RS03070 at 687.410 kb on + strand, within QEN71_RS03070 at 687.410 kb on + strand, within QEN71_RS03070 at 687.446 kb on + strand, within QEN71_RS03070 at 687.446 kb on + strand, within QEN71_RS03070 at 687.446 kb on + strand, within QEN71_RS03070 at 687.446 kb on + strand, within QEN71_RS03070 at 687.446 kb on + strand, within QEN71_RS03070 at 687.446 kb on + strand, within QEN71_RS03070 at 687.446 kb on + strand, within QEN71_RS03070 at 687.447 kb on - strand, within QEN71_RS03070 at 687.499 kb on + strand, within QEN71_RS03070 at 687.499 kb on + strand, within QEN71_RS03070 at 687.499 kb on + strand, within QEN71_RS03070 at 687.500 kb on - strand, within QEN71_RS03070 at 687.500 kb on - strand, within QEN71_RS03070 at 687.554 kb on + strand, within QEN71_RS03070 at 687.620 kb on + strand, within QEN71_RS03070 at 687.620 kb on + strand, within QEN71_RS03070 at 687.620 kb on + strand, within QEN71_RS03070 at 687.620 kb on + strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.621 kb on - strand, within QEN71_RS03070 at 687.774 kb on - strand, within QEN71_RS03070 at 687.790 kb on + strand, within QEN71_RS03070 at 687.790 kb on + strand, within QEN71_RS03070 at 687.790 kb on + strand, within QEN71_RS03070 at 687.791 kb on - strand, within QEN71_RS03070 at 687.791 kb on - strand, within QEN71_RS03070 at 687.791 kb on - strand, within QEN71_RS03070 at 687.796 kb on + strand, within QEN71_RS03070 at 687.796 kb on + strand, within QEN71_RS03070 at 687.796 kb on + strand, within QEN71_RS03070 at 687.796 kb on + strand, within QEN71_RS03070 at 687.796 kb on + strand, within QEN71_RS03070 at 687.797 kb on - strand, within QEN71_RS03070 at 687.797 kb on - strand, within QEN71_RS03070 at 687.797 kb on - strand, within QEN71_RS03070 at 687.797 kb on - strand, within QEN71_RS03070 at 687.797 kb on - strand, within QEN71_RS03070 at 687.880 kb on + strand, within QEN71_RS03070 at 687.880 kb on + strand, within QEN71_RS03070 at 687.881 kb on - strand, within QEN71_RS03070 at 687.881 kb on - strand, within QEN71_RS03070 at 687.881 kb on - strand, within QEN71_RS03070 at 687.943 kb on + strand, within QEN71_RS03070 at 687.943 kb on + strand, within QEN71_RS03070 at 687.944 kb on - strand, within QEN71_RS03070 at 687.944 kb on - strand, within QEN71_RS03070 at 687.944 kb on - strand, within QEN71_RS03070 at 688.172 kb on + strand, within QEN71_RS03070 at 688.235 kb on + strand, within QEN71_RS03070 at 688.236 kb on - strand, within QEN71_RS03070 at 688.386 kb on + strand at 688.386 kb on + strand at 688.386 kb on + strand at 688.387 kb on - strand at 688.387 kb on - strand at 688.387 kb on - strand at 688.416 kb on + strand at 688.416 kb on + strand at 688.417 kb on - strand at 688.417 kb on - strand at 688.417 kb on - strand at 688.417 kb on - strand at 688.417 kb on - strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.475 kb on + strand at 688.476 kb on - strand at 688.476 kb on - strand at 688.476 kb on - strand at 688.476 kb on - strand at 688.515 kb on + strand at 688.515 kb on + strand at 688.515 kb on + strand at 688.515 kb on + strand at 688.515 kb on + strand at 688.516 kb on - strand at 688.516 kb on - strand at 688.516 kb on - strand at 688.516 kb on - strand at 688.516 kb on - strand at 688.516 kb on - strand at 688.516 kb on - strand at 688.516 kb on - strand at 688.543 kb on + strand at 688.543 kb on + strand at 688.543 kb on + strand at 688.544 kb on - strand at 688.544 kb on - strand at 688.547 kb on - strand at 688.547 kb on - strand at 688.636 kb on - strand at 688.636 kb on - strand at 688.636 kb on - strand at 688.636 kb on - strand at 688.657 kb on - strand, within QEN71_RS03075 at 688.657 kb on - strand, within QEN71_RS03075 at 688.657 kb on - strand, within QEN71_RS03075 at 688.657 kb on - strand, within QEN71_RS03075 at 688.657 kb on - strand, within QEN71_RS03075 at 688.741 kb on - strand, within QEN71_RS03075 at 688.741 kb on - strand, within QEN71_RS03075 at 688.754 kb on - strand, within QEN71_RS03075 at 688.807 kb on - strand at 688.807 kb on - strand at 688.807 kb on - strand at 688.807 kb on - strand at 688.807 kb on - strand at 688.807 kb on - strand at 688.814 kb on - strand at 689.241 kb on - strand at 689.241 kb on - strand at 689.241 kb on - strand at 689.241 kb on - strand at 689.241 kb on - strand at 689.241 kb on - strand at 689.241 kb on - strand at 689.265 kb on + strand at 689.265 kb on + strand at 689.265 kb on + strand at 689.265 kb on + strand at 689.266 kb on - strand at 689.266 kb on - strand at 689.266 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 685,889 + -0.5 685,890 - -2.1 686,083 + QEN71_RS03065 0.29 -1.6 686,083 + QEN71_RS03065 0.29 -0.6 686,260 + QEN71_RS03065 0.49 -1.3 686,321 + QEN71_RS03065 0.55 -2.3 686,321 + QEN71_RS03065 0.55 -2.1 686,322 - QEN71_RS03065 0.56 -0.8 686,366 + QEN71_RS03065 0.60 -1.6 686,366 + QEN71_RS03065 0.60 -1.1 686,367 - QEN71_RS03065 0.61 -3.3 686,367 - QEN71_RS03065 0.61 +1.1 686,367 - QEN71_RS03065 0.61 -1.7 686,367 - QEN71_RS03065 0.61 -2.4 686,601 + QEN71_RS03065 0.86 -1.0 686,601 + QEN71_RS03065 0.86 -2.4 686,602 - QEN71_RS03065 0.87 -0.3 686,667 + +0.7 686,668 - -1.7 686,728 + -1.4 686,728 + +0.2 686,728 + -1.1 686,733 + +0.2 686,733 + -0.2 686,733 + -0.1 686,733 + -0.8 686,734 - +0.2 686,734 - -0.4 686,737 - +0.5 686,884 + -1.4 686,884 + -0.7 686,884 + -1.4 686,995 + QEN71_RS03070 0.12 -0.2 686,996 - QEN71_RS03070 0.12 -1.9 686,996 - QEN71_RS03070 0.12 -1.6 686,998 + QEN71_RS03070 0.12 -0.3 686,998 + QEN71_RS03070 0.12 -2.4 686,998 + QEN71_RS03070 0.12 -1.0 686,998 + QEN71_RS03070 0.12 -0.9 686,998 + QEN71_RS03070 0.12 +0.5 686,998 + QEN71_RS03070 0.12 -1.7 686,998 + QEN71_RS03070 0.12 -1.3 686,999 - QEN71_RS03070 0.12 -2.3 687,079 + QEN71_RS03070 0.17 -1.8 687,079 + QEN71_RS03070 0.17 -1.0 687,079 + QEN71_RS03070 0.17 -1.6 687,079 + QEN71_RS03070 0.17 -1.8 687,079 + QEN71_RS03070 0.17 +0.1 687,079 + QEN71_RS03070 0.17 -1.9 687,080 - QEN71_RS03070 0.17 -1.4 687,080 - QEN71_RS03070 0.17 -0.5 687,080 - QEN71_RS03070 0.17 -3.0 687,080 - QEN71_RS03070 0.17 -1.3 687,080 - QEN71_RS03070 0.17 -1.6 687,080 - QEN71_RS03070 0.17 -1.1 687,316 + QEN71_RS03070 0.32 -0.2 687,317 - QEN71_RS03070 0.32 -0.9 687,317 - QEN71_RS03070 0.32 -1.5 687,317 - QEN71_RS03070 0.32 +0.8 687,355 - QEN71_RS03070 0.35 -3.2 687,355 - QEN71_RS03070 0.35 -1.2 687,355 - QEN71_RS03070 0.35 -1.2 687,373 + QEN71_RS03070 0.36 -1.9 687,373 + QEN71_RS03070 0.36 -0.2 687,373 + QEN71_RS03070 0.36 -2.6 687,373 + QEN71_RS03070 0.36 -0.2 687,373 + QEN71_RS03070 0.36 -1.7 687,373 + QEN71_RS03070 0.36 -1.5 687,373 + QEN71_RS03070 0.36 -1.3 687,373 + QEN71_RS03070 0.36 -0.7 687,373 + QEN71_RS03070 0.36 -1.7 687,373 + QEN71_RS03070 0.36 -0.5 687,373 + QEN71_RS03070 0.36 -1.3 687,373 + QEN71_RS03070 0.36 -1.5 687,373 + QEN71_RS03070 0.36 -2.1 687,374 - QEN71_RS03070 0.36 -0.4 687,374 - QEN71_RS03070 0.36 -1.5 687,374 - QEN71_RS03070 0.36 +0.5 687,374 - QEN71_RS03070 0.36 -0.5 687,374 - QEN71_RS03070 0.36 -1.7 687,374 - QEN71_RS03070 0.36 -2.4 687,410 + QEN71_RS03070 0.38 +0.5 687,410 + QEN71_RS03070 0.38 -1.2 687,410 + QEN71_RS03070 0.38 +0.2 687,410 + QEN71_RS03070 0.38 -0.5 687,446 + QEN71_RS03070 0.40 -0.7 687,446 + QEN71_RS03070 0.40 -1.5 687,446 + QEN71_RS03070 0.40 -1.4 687,446 + QEN71_RS03070 0.40 +0.4 687,446 + QEN71_RS03070 0.40 +1.7 687,446 + QEN71_RS03070 0.40 -2.0 687,446 + QEN71_RS03070 0.40 -1.6 687,447 - QEN71_RS03070 0.40 -0.5 687,499 + QEN71_RS03070 0.44 -0.2 687,499 + QEN71_RS03070 0.44 +0.0 687,499 + QEN71_RS03070 0.44 -1.6 687,500 - QEN71_RS03070 0.44 -0.7 687,500 - QEN71_RS03070 0.44 -0.6 687,554 + QEN71_RS03070 0.47 -1.9 687,620 + QEN71_RS03070 0.51 -2.0 687,620 + QEN71_RS03070 0.51 -1.5 687,620 + QEN71_RS03070 0.51 -0.0 687,620 + QEN71_RS03070 0.51 -1.1 687,621 - QEN71_RS03070 0.51 -0.9 687,621 - QEN71_RS03070 0.51 -1.5 687,621 - QEN71_RS03070 0.51 -0.7 687,621 - QEN71_RS03070 0.51 -2.6 687,621 - QEN71_RS03070 0.51 -0.5 687,621 - QEN71_RS03070 0.51 -2.2 687,621 - QEN71_RS03070 0.51 -3.2 687,621 - QEN71_RS03070 0.51 -0.2 687,621 - QEN71_RS03070 0.51 -2.6 687,621 - QEN71_RS03070 0.51 -0.2 687,621 - QEN71_RS03070 0.51 -2.3 687,621 - QEN71_RS03070 0.51 -2.5 687,621 - QEN71_RS03070 0.51 -1.2 687,774 - QEN71_RS03070 0.61 -0.2 687,790 + QEN71_RS03070 0.62 -1.3 687,790 + QEN71_RS03070 0.62 -2.0 687,790 + QEN71_RS03070 0.62 -0.1 687,791 - QEN71_RS03070 0.62 -1.2 687,791 - QEN71_RS03070 0.62 -2.4 687,791 - QEN71_RS03070 0.62 -1.2 687,796 + QEN71_RS03070 0.62 -0.5 687,796 + QEN71_RS03070 0.62 -2.1 687,796 + QEN71_RS03070 0.62 -0.7 687,796 + QEN71_RS03070 0.62 -0.9 687,796 + QEN71_RS03070 0.62 +1.7 687,797 - QEN71_RS03070 0.62 -1.0 687,797 - QEN71_RS03070 0.62 -1.1 687,797 - QEN71_RS03070 0.62 -2.1 687,797 - QEN71_RS03070 0.62 +0.6 687,797 - QEN71_RS03070 0.62 -1.7 687,880 + QEN71_RS03070 0.67 -1.3 687,880 + QEN71_RS03070 0.67 -2.4 687,881 - QEN71_RS03070 0.67 -2.0 687,881 - QEN71_RS03070 0.67 -1.1 687,881 - QEN71_RS03070 0.67 -1.9 687,943 + QEN71_RS03070 0.71 -3.2 687,943 + QEN71_RS03070 0.71 -1.2 687,944 - QEN71_RS03070 0.71 +0.1 687,944 - QEN71_RS03070 0.71 -2.3 687,944 - QEN71_RS03070 0.71 -1.9 688,172 + QEN71_RS03070 0.86 -2.7 688,235 + QEN71_RS03070 0.90 -0.2 688,236 - QEN71_RS03070 0.90 -1.3 688,386 + +0.1 688,386 + -2.0 688,386 + -0.9 688,387 - -0.1 688,387 - -1.2 688,387 - -1.6 688,416 + +0.6 688,416 + -0.3 688,417 - +0.0 688,417 - -0.1 688,417 - +0.6 688,417 - +0.5 688,417 - +0.2 688,475 + -0.1 688,475 + +0.6 688,475 + +2.1 688,475 + -0.3 688,475 + -1.2 688,475 + +0.8 688,475 + -0.5 688,475 + -0.9 688,475 + -1.2 688,476 - -0.4 688,476 - -1.2 688,476 - -0.2 688,476 - -0.3 688,515 + -0.1 688,515 + +0.5 688,515 + +1.0 688,515 + +2.1 688,515 + +1.0 688,516 - -2.6 688,516 - -0.6 688,516 - -0.0 688,516 - -2.4 688,516 - -1.4 688,516 - -0.2 688,516 - -0.1 688,516 - -0.7 688,543 + +0.1 688,543 + -0.2 688,543 + +1.6 688,544 - -0.1 688,544 - -1.0 688,547 - +0.1 688,547 - +0.7 688,636 - +1.4 688,636 - -0.8 688,636 - -1.1 688,636 - -0.9 688,657 - QEN71_RS03075 0.14 +2.4 688,657 - QEN71_RS03075 0.14 +1.1 688,657 - QEN71_RS03075 0.14 -0.7 688,657 - QEN71_RS03075 0.14 -0.9 688,657 - QEN71_RS03075 0.14 -0.0 688,741 - QEN71_RS03075 0.64 +0.5 688,741 - QEN71_RS03075 0.64 -0.9 688,754 - QEN71_RS03075 0.71 +0.0 688,807 - -0.7 688,807 - +2.0 688,807 - +0.8 688,807 - -0.4 688,807 - +0.6 688,807 - -1.2 688,814 - +1.1 689,241 - +0.1 689,241 - -0.4 689,241 - +1.3 689,241 - +0.6 689,241 - +0.1 689,241 - -0.1 689,241 - +0.2 689,265 + +0.6 689,265 + -0.1 689,265 + -0.2 689,265 + +1.2 689,266 - -0.9 689,266 - -1.0 689,266 - +0.2
Or see this region's nucleotide sequence