Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03055 and QEN71_RS03060 are separated by 132 nucleotides QEN71_RS03060 and QEN71_RS03065 overlap by 1 nucleotides QEN71_RS03065 and QEN71_RS03070 are separated by 79 nucleotides
QEN71_RS03055: QEN71_RS03055 - acyl-CoA desaturase, at 683,361 to 684,557
_RS03055
QEN71_RS03060: QEN71_RS03060 - quinolinate synthase NadA, at 684,690 to 685,820
_RS03060
QEN71_RS03065: QEN71_RS03065 - carboxylating nicotinate-nucleotide diphosphorylase, at 685,820 to 686,722
_RS03065
QEN71_RS03070: QEN71_RS03070 - L-aspartate oxidase, at 686,802 to 688,400
_RS03070
Position (kb) 684
685
686 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 684.572 kb on + strand at 684.572 kb on + strand at 684.572 kb on + strand at 684.572 kb on + strand at 684.573 kb on - strand at 684.573 kb on - strand at 684.575 kb on + strand at 684.586 kb on + strand at 684.586 kb on + strand at 684.586 kb on + strand at 684.586 kb on + strand at 684.586 kb on + strand at 684.586 kb on + strand at 684.587 kb on - strand at 684.587 kb on - strand at 684.587 kb on - strand at 684.718 kb on - strand at 684.816 kb on - strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.861 kb on + strand, within QEN71_RS03060 at 684.862 kb on - strand, within QEN71_RS03060 at 684.862 kb on - strand, within QEN71_RS03060 at 684.862 kb on - strand, within QEN71_RS03060 at 684.862 kb on - strand, within QEN71_RS03060 at 684.862 kb on - strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.864 kb on + strand, within QEN71_RS03060 at 684.865 kb on - strand, within QEN71_RS03060 at 684.865 kb on - strand, within QEN71_RS03060 at 684.865 kb on - strand, within QEN71_RS03060 at 684.865 kb on - strand, within QEN71_RS03060 at 684.865 kb on - strand, within QEN71_RS03060 at 684.865 kb on - strand, within QEN71_RS03060 at 685.131 kb on - strand, within QEN71_RS03060 at 685.134 kb on + strand, within QEN71_RS03060 at 685.134 kb on + strand, within QEN71_RS03060 at 685.134 kb on + strand, within QEN71_RS03060 at 685.134 kb on + strand, within QEN71_RS03060 at 685.134 kb on + strand, within QEN71_RS03060 at 685.134 kb on + strand, within QEN71_RS03060 at 685.134 kb on + strand, within QEN71_RS03060 at 685.135 kb on - strand, within QEN71_RS03060 at 685.135 kb on - strand, within QEN71_RS03060 at 685.135 kb on - strand, within QEN71_RS03060 at 685.142 kb on + strand, within QEN71_RS03060 at 685.142 kb on + strand, within QEN71_RS03060 at 685.142 kb on + strand, within QEN71_RS03060 at 685.142 kb on + strand, within QEN71_RS03060 at 685.143 kb on - strand, within QEN71_RS03060 at 685.143 kb on - strand, within QEN71_RS03060 at 685.143 kb on - strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.269 kb on + strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.270 kb on - strand, within QEN71_RS03060 at 685.271 kb on + strand, within QEN71_RS03060 at 685.271 kb on + strand, within QEN71_RS03060 at 685.271 kb on + strand, within QEN71_RS03060 at 685.271 kb on + strand, within QEN71_RS03060 at 685.271 kb on + strand, within QEN71_RS03060 at 685.272 kb on - strand, within QEN71_RS03060 at 685.272 kb on - strand, within QEN71_RS03060 at 685.272 kb on - strand, within QEN71_RS03060 at 685.272 kb on - strand, within QEN71_RS03060 at 685.372 kb on - strand, within QEN71_RS03060 at 685.445 kb on + strand, within QEN71_RS03060 at 685.445 kb on + strand, within QEN71_RS03060 at 685.445 kb on + strand, within QEN71_RS03060 at 685.445 kb on + strand, within QEN71_RS03060 at 685.445 kb on + strand, within QEN71_RS03060 at 685.445 kb on + strand, within QEN71_RS03060 at 685.446 kb on - strand, within QEN71_RS03060 at 685.446 kb on - strand, within QEN71_RS03060 at 685.556 kb on + strand, within QEN71_RS03060 at 685.557 kb on - strand, within QEN71_RS03060 at 685.889 kb on + strand at 685.890 kb on - strand at 686.083 kb on + strand, within QEN71_RS03065 at 686.083 kb on + strand, within QEN71_RS03065 at 686.260 kb on + strand, within QEN71_RS03065 at 686.321 kb on + strand, within QEN71_RS03065 at 686.321 kb on + strand, within QEN71_RS03065 at 686.322 kb on - strand, within QEN71_RS03065 at 686.366 kb on + strand, within QEN71_RS03065 at 686.366 kb on + strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.367 kb on - strand, within QEN71_RS03065 at 686.601 kb on + strand, within QEN71_RS03065 at 686.601 kb on + strand, within QEN71_RS03065 at 686.602 kb on - strand, within QEN71_RS03065 at 686.667 kb on + strand at 686.668 kb on - strand at 686.728 kb on + strand at 686.728 kb on + strand at 686.728 kb on + strand at 686.733 kb on + strand at 686.733 kb on + strand at 686.733 kb on + strand at 686.733 kb on + strand at 686.734 kb on - strand at 686.734 kb on - strand at 686.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 684,572 + -1.1 684,572 + -0.2 684,572 + -0.0 684,572 + -0.1 684,573 - -1.1 684,573 - -2.4 684,575 + -0.2 684,586 + -1.0 684,586 + -0.4 684,586 + -0.5 684,586 + -0.4 684,586 + -1.3 684,586 + -0.0 684,587 - -2.2 684,587 - -1.1 684,587 - -2.1 684,718 - -0.3 684,816 - QEN71_RS03060 0.11 -1.5 684,861 + QEN71_RS03060 0.15 -0.0 684,861 + QEN71_RS03060 0.15 -0.2 684,861 + QEN71_RS03060 0.15 -3.0 684,861 + QEN71_RS03060 0.15 +0.2 684,861 + QEN71_RS03060 0.15 -1.3 684,861 + QEN71_RS03060 0.15 -0.6 684,861 + QEN71_RS03060 0.15 -0.7 684,861 + QEN71_RS03060 0.15 -0.7 684,861 + QEN71_RS03060 0.15 -0.8 684,861 + QEN71_RS03060 0.15 -1.4 684,862 - QEN71_RS03060 0.15 -1.4 684,862 - QEN71_RS03060 0.15 -1.1 684,862 - QEN71_RS03060 0.15 -0.9 684,862 - QEN71_RS03060 0.15 -1.2 684,862 - QEN71_RS03060 0.15 -2.3 684,864 + QEN71_RS03060 0.15 -0.9 684,864 + QEN71_RS03060 0.15 -0.5 684,864 + QEN71_RS03060 0.15 -2.2 684,864 + QEN71_RS03060 0.15 -2.4 684,864 + QEN71_RS03060 0.15 -3.2 684,864 + QEN71_RS03060 0.15 -0.5 684,864 + QEN71_RS03060 0.15 -0.1 684,864 + QEN71_RS03060 0.15 +3.1 684,864 + QEN71_RS03060 0.15 -1.6 684,864 + QEN71_RS03060 0.15 -0.8 684,864 + QEN71_RS03060 0.15 -2.1 684,864 + QEN71_RS03060 0.15 +0.1 684,864 + QEN71_RS03060 0.15 -3.2 684,864 + QEN71_RS03060 0.15 -1.1 684,864 + QEN71_RS03060 0.15 -0.1 684,865 - QEN71_RS03060 0.15 -0.5 684,865 - QEN71_RS03060 0.15 -2.1 684,865 - QEN71_RS03060 0.15 -1.9 684,865 - QEN71_RS03060 0.15 -0.1 684,865 - QEN71_RS03060 0.15 -2.2 684,865 - QEN71_RS03060 0.15 -3.7 685,131 - QEN71_RS03060 0.39 -1.1 685,134 + QEN71_RS03060 0.39 -2.1 685,134 + QEN71_RS03060 0.39 -1.5 685,134 + QEN71_RS03060 0.39 -2.7 685,134 + QEN71_RS03060 0.39 -0.2 685,134 + QEN71_RS03060 0.39 -1.1 685,134 + QEN71_RS03060 0.39 -1.7 685,134 + QEN71_RS03060 0.39 -3.2 685,135 - QEN71_RS03060 0.39 -2.0 685,135 - QEN71_RS03060 0.39 +0.2 685,135 - QEN71_RS03060 0.39 -2.5 685,142 + QEN71_RS03060 0.40 -1.1 685,142 + QEN71_RS03060 0.40 -1.2 685,142 + QEN71_RS03060 0.40 +0.2 685,142 + QEN71_RS03060 0.40 -1.3 685,143 - QEN71_RS03060 0.40 -0.6 685,143 - QEN71_RS03060 0.40 -1.6 685,143 - QEN71_RS03060 0.40 -1.4 685,269 + QEN71_RS03060 0.51 -2.1 685,269 + QEN71_RS03060 0.51 -1.5 685,269 + QEN71_RS03060 0.51 -1.9 685,269 + QEN71_RS03060 0.51 -1.1 685,269 + QEN71_RS03060 0.51 -0.9 685,269 + QEN71_RS03060 0.51 -0.9 685,269 + QEN71_RS03060 0.51 -2.8 685,269 + QEN71_RS03060 0.51 -0.6 685,269 + QEN71_RS03060 0.51 -2.2 685,269 + QEN71_RS03060 0.51 -1.1 685,269 + QEN71_RS03060 0.51 -1.2 685,269 + QEN71_RS03060 0.51 -2.9 685,269 + QEN71_RS03060 0.51 -2.9 685,269 + QEN71_RS03060 0.51 -0.5 685,269 + QEN71_RS03060 0.51 -1.1 685,269 + QEN71_RS03060 0.51 -3.3 685,269 + QEN71_RS03060 0.51 -1.2 685,269 + QEN71_RS03060 0.51 -0.7 685,269 + QEN71_RS03060 0.51 -2.0 685,269 + QEN71_RS03060 0.51 -1.1 685,269 + QEN71_RS03060 0.51 -0.4 685,269 + QEN71_RS03060 0.51 +1.1 685,269 + QEN71_RS03060 0.51 -0.6 685,269 + QEN71_RS03060 0.51 -0.4 685,269 + QEN71_RS03060 0.51 -0.9 685,269 + QEN71_RS03060 0.51 -1.0 685,269 + QEN71_RS03060 0.51 -1.8 685,269 + QEN71_RS03060 0.51 -1.7 685,270 - QEN71_RS03060 0.51 -2.2 685,270 - QEN71_RS03060 0.51 -0.7 685,270 - QEN71_RS03060 0.51 -0.7 685,270 - QEN71_RS03060 0.51 +1.1 685,270 - QEN71_RS03060 0.51 -0.5 685,270 - QEN71_RS03060 0.51 -1.5 685,270 - QEN71_RS03060 0.51 -0.5 685,270 - QEN71_RS03060 0.51 -1.2 685,270 - QEN71_RS03060 0.51 -1.5 685,270 - QEN71_RS03060 0.51 -1.8 685,270 - QEN71_RS03060 0.51 -1.3 685,270 - QEN71_RS03060 0.51 -0.8 685,270 - QEN71_RS03060 0.51 -2.7 685,270 - QEN71_RS03060 0.51 -0.7 685,270 - QEN71_RS03060 0.51 -1.2 685,270 - QEN71_RS03060 0.51 +0.1 685,270 - QEN71_RS03060 0.51 -0.7 685,270 - QEN71_RS03060 0.51 -1.3 685,270 - QEN71_RS03060 0.51 -2.9 685,270 - QEN71_RS03060 0.51 -1.8 685,270 - QEN71_RS03060 0.51 -0.4 685,271 + QEN71_RS03060 0.51 -1.3 685,271 + QEN71_RS03060 0.51 -1.5 685,271 + QEN71_RS03060 0.51 -3.0 685,271 + QEN71_RS03060 0.51 -0.7 685,271 + QEN71_RS03060 0.51 -1.8 685,272 - QEN71_RS03060 0.51 -0.9 685,272 - QEN71_RS03060 0.51 -2.0 685,272 - QEN71_RS03060 0.51 -0.6 685,272 - QEN71_RS03060 0.51 -3.1 685,372 - QEN71_RS03060 0.60 +0.1 685,445 + QEN71_RS03060 0.67 -1.6 685,445 + QEN71_RS03060 0.67 -0.2 685,445 + QEN71_RS03060 0.67 -1.5 685,445 + QEN71_RS03060 0.67 -1.5 685,445 + QEN71_RS03060 0.67 -1.7 685,445 + QEN71_RS03060 0.67 -0.5 685,446 - QEN71_RS03060 0.67 -1.0 685,446 - QEN71_RS03060 0.67 -1.7 685,556 + QEN71_RS03060 0.77 -1.2 685,557 - QEN71_RS03060 0.77 +1.8 685,889 + -0.5 685,890 - -2.1 686,083 + QEN71_RS03065 0.29 -1.6 686,083 + QEN71_RS03065 0.29 -0.6 686,260 + QEN71_RS03065 0.49 -1.3 686,321 + QEN71_RS03065 0.55 -2.3 686,321 + QEN71_RS03065 0.55 -2.1 686,322 - QEN71_RS03065 0.56 -0.8 686,366 + QEN71_RS03065 0.60 -1.6 686,366 + QEN71_RS03065 0.60 -1.1 686,367 - QEN71_RS03065 0.61 -3.3 686,367 - QEN71_RS03065 0.61 +1.1 686,367 - QEN71_RS03065 0.61 -1.7 686,367 - QEN71_RS03065 0.61 -2.4 686,601 + QEN71_RS03065 0.86 -1.0 686,601 + QEN71_RS03065 0.86 -2.4 686,602 - QEN71_RS03065 0.87 -0.3 686,667 + +0.7 686,668 - -1.7 686,728 + -1.4 686,728 + +0.2 686,728 + -1.1 686,733 + +0.2 686,733 + -0.2 686,733 + -0.1 686,733 + -0.8 686,734 - +0.2 686,734 - -0.4 686,737 - +0.5
Or see this region's nucleotide sequence