Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02620 and QEN71_RS02625 are separated by 122 nucleotides QEN71_RS02625 and QEN71_RS02630 are separated by 171 nucleotides
QEN71_RS02620: QEN71_RS02620 - sugar-binding transcriptional regulator, at 587,281 to 588,252
_RS02620
QEN71_RS02625: QEN71_RS02625 - xylulokinase, at 588,375 to 589,859
_RS02625
QEN71_RS02630: QEN71_RS02630 - mannitol dehydrogenase family protein, at 590,031 to 591,437
_RS02630
Position (kb)
588
589
590 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 587.611 kb on - strand, within QEN71_RS02620 at 587.784 kb on - strand, within QEN71_RS02620 at 588.197 kb on + strand at 588.197 kb on + strand at 588.197 kb on + strand at 588.197 kb on + strand at 588.197 kb on + strand at 588.197 kb on + strand at 588.198 kb on - strand at 588.198 kb on - strand at 588.200 kb on + strand at 588.201 kb on - strand at 588.201 kb on - strand at 588.201 kb on - strand at 588.376 kb on + strand at 588.427 kb on + strand at 588.439 kb on + strand at 588.439 kb on + strand at 588.439 kb on + strand at 588.440 kb on - strand at 588.646 kb on + strand, within QEN71_RS02625 at 588.646 kb on + strand, within QEN71_RS02625 at 588.646 kb on + strand, within QEN71_RS02625 at 588.647 kb on - strand, within QEN71_RS02625 at 588.647 kb on - strand, within QEN71_RS02625 at 588.687 kb on + strand, within QEN71_RS02625 at 588.688 kb on - strand, within QEN71_RS02625 at 588.760 kb on + strand, within QEN71_RS02625 at 588.817 kb on + strand, within QEN71_RS02625 at 588.853 kb on + strand, within QEN71_RS02625 at 588.853 kb on + strand, within QEN71_RS02625 at 588.853 kb on + strand, within QEN71_RS02625 at 588.853 kb on + strand, within QEN71_RS02625 at 588.854 kb on - strand, within QEN71_RS02625 at 588.854 kb on - strand, within QEN71_RS02625 at 589.390 kb on + strand, within QEN71_RS02625 at 589.390 kb on + strand, within QEN71_RS02625 at 589.391 kb on - strand, within QEN71_RS02625 at 589.528 kb on + strand, within QEN71_RS02625 at 589.528 kb on + strand, within QEN71_RS02625 at 589.528 kb on + strand, within QEN71_RS02625 at 589.855 kb on + strand at 589.855 kb on + strand at 589.855 kb on + strand at 589.855 kb on + strand at 589.855 kb on + strand at 589.855 kb on + strand at 589.855 kb on + strand at 589.855 kb on + strand at 589.855 kb on + strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.856 kb on - strand at 589.892 kb on + strand at 589.892 kb on + strand at 589.893 kb on - strand at 589.897 kb on + strand at 589.897 kb on + strand at 590.014 kb on - strand at 590.032 kb on + strand at 590.032 kb on + strand at 590.033 kb on - strand at 590.033 kb on - strand at 590.213 kb on - strand, within QEN71_RS02630 at 590.213 kb on - strand, within QEN71_RS02630 at 590.213 kb on - strand, within QEN71_RS02630 at 590.213 kb on - strand, within QEN71_RS02630 at 590.213 kb on - strand, within QEN71_RS02630 at 590.213 kb on - strand, within QEN71_RS02630 at 590.213 kb on - strand, within QEN71_RS02630 at 590.218 kb on + strand, within QEN71_RS02630 at 590.218 kb on + strand, within QEN71_RS02630 at 590.219 kb on - strand, within QEN71_RS02630 at 590.390 kb on + strand, within QEN71_RS02630 at 590.390 kb on + strand, within QEN71_RS02630 at 590.391 kb on - strand, within QEN71_RS02630 at 590.391 kb on - strand, within QEN71_RS02630 at 590.391 kb on - strand, within QEN71_RS02630 at 590.392 kb on + strand, within QEN71_RS02630 at 590.392 kb on + strand, within QEN71_RS02630 at 590.392 kb on + strand, within QEN71_RS02630 at 590.392 kb on + strand, within QEN71_RS02630 at 590.392 kb on + strand, within QEN71_RS02630 at 590.392 kb on + strand, within QEN71_RS02630 at 590.392 kb on + strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.393 kb on - strand, within QEN71_RS02630 at 590.428 kb on + strand, within QEN71_RS02630 at 590.429 kb on - strand, within QEN71_RS02630 at 590.429 kb on - strand, within QEN71_RS02630 at 590.485 kb on + strand, within QEN71_RS02630 at 590.485 kb on + strand, within QEN71_RS02630 at 590.485 kb on + strand, within QEN71_RS02630 at 590.485 kb on + strand, within QEN71_RS02630 at 590.485 kb on + strand, within QEN71_RS02630 at 590.486 kb on - strand, within QEN71_RS02630 at 590.486 kb on - strand, within QEN71_RS02630 at 590.486 kb on - strand, within QEN71_RS02630 at 590.486 kb on - strand, within QEN71_RS02630 at 590.486 kb on - strand, within QEN71_RS02630 at 590.486 kb on - strand, within QEN71_RS02630 at 590.536 kb on + strand, within QEN71_RS02630 at 590.536 kb on + strand, within QEN71_RS02630 at 590.536 kb on + strand, within QEN71_RS02630 at 590.536 kb on + strand, within QEN71_RS02630 at 590.536 kb on + strand, within QEN71_RS02630 at 590.536 kb on + strand, within QEN71_RS02630 at 590.536 kb on + strand, within QEN71_RS02630 at 590.537 kb on - strand, within QEN71_RS02630 at 590.537 kb on - strand, within QEN71_RS02630 at 590.537 kb on - strand, within QEN71_RS02630 at 590.537 kb on - strand, within QEN71_RS02630 at 590.537 kb on - strand, within QEN71_RS02630 at 590.576 kb on + strand, within QEN71_RS02630 at 590.576 kb on + strand, within QEN71_RS02630 at 590.576 kb on + strand, within QEN71_RS02630 at 590.576 kb on + strand, within QEN71_RS02630 at 590.576 kb on + strand, within QEN71_RS02630 at 590.576 kb on + strand, within QEN71_RS02630 at 590.576 kb on + strand, within QEN71_RS02630 at 590.577 kb on - strand, within QEN71_RS02630 at 590.577 kb on - strand, within QEN71_RS02630 at 590.703 kb on - strand, within QEN71_RS02630 at 590.789 kb on + strand, within QEN71_RS02630 at 590.789 kb on + strand, within QEN71_RS02630 at 590.790 kb on - strand, within QEN71_RS02630
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 587,611 - QEN71_RS02620 0.34 -0.2 587,784 - QEN71_RS02620 0.52 -0.7 588,197 + +0.9 588,197 + -1.5 588,197 + -0.3 588,197 + -1.5 588,197 + -0.5 588,197 + +0.5 588,198 - +1.0 588,198 - -1.4 588,200 + -1.8 588,201 - +0.4 588,201 - -0.3 588,201 - -0.5 588,376 + +2.4 588,427 + -0.9 588,439 + +1.4 588,439 + -1.4 588,439 + +0.1 588,440 - +0.2 588,646 + QEN71_RS02625 0.18 -0.9 588,646 + QEN71_RS02625 0.18 +0.2 588,646 + QEN71_RS02625 0.18 -1.2 588,647 - QEN71_RS02625 0.18 -1.3 588,647 - QEN71_RS02625 0.18 -0.2 588,687 + QEN71_RS02625 0.21 +0.4 588,688 - QEN71_RS02625 0.21 +1.0 588,760 + QEN71_RS02625 0.26 -1.2 588,817 + QEN71_RS02625 0.30 +1.5 588,853 + QEN71_RS02625 0.32 +0.9 588,853 + QEN71_RS02625 0.32 +0.3 588,853 + QEN71_RS02625 0.32 -1.8 588,853 + QEN71_RS02625 0.32 -3.4 588,854 - QEN71_RS02625 0.32 -1.2 588,854 - QEN71_RS02625 0.32 -1.9 589,390 + QEN71_RS02625 0.68 +0.2 589,390 + QEN71_RS02625 0.68 -1.2 589,391 - QEN71_RS02625 0.68 +0.0 589,528 + QEN71_RS02625 0.78 -1.1 589,528 + QEN71_RS02625 0.78 +0.3 589,528 + QEN71_RS02625 0.78 -1.5 589,855 + -1.4 589,855 + -0.5 589,855 + -1.5 589,855 + +1.2 589,855 + +0.9 589,855 + +1.1 589,855 + -0.3 589,855 + -1.5 589,855 + +0.0 589,856 - +0.6 589,856 - -0.6 589,856 - +0.6 589,856 - -0.0 589,856 - +0.3 589,856 - -0.5 589,856 - +0.5 589,856 - +1.0 589,856 - -2.0 589,856 - -0.2 589,892 + -0.5 589,892 + +0.5 589,893 - -0.1 589,897 + +1.3 589,897 + -1.8 590,014 - +0.6 590,032 + -0.4 590,032 + -1.6 590,033 - -0.5 590,033 - +1.4 590,213 - QEN71_RS02630 0.13 +0.8 590,213 - QEN71_RS02630 0.13 -0.7 590,213 - QEN71_RS02630 0.13 -0.5 590,213 - QEN71_RS02630 0.13 +0.4 590,213 - QEN71_RS02630 0.13 +0.0 590,213 - QEN71_RS02630 0.13 -0.4 590,213 - QEN71_RS02630 0.13 +0.7 590,218 + QEN71_RS02630 0.13 -0.7 590,218 + QEN71_RS02630 0.13 -1.1 590,219 - QEN71_RS02630 0.13 -0.0 590,390 + QEN71_RS02630 0.26 +0.5 590,390 + QEN71_RS02630 0.26 +1.9 590,391 - QEN71_RS02630 0.26 +1.0 590,391 - QEN71_RS02630 0.26 +0.1 590,391 - QEN71_RS02630 0.26 -1.4 590,392 + QEN71_RS02630 0.26 -0.4 590,392 + QEN71_RS02630 0.26 +2.2 590,392 + QEN71_RS02630 0.26 +2.1 590,392 + QEN71_RS02630 0.26 -0.1 590,392 + QEN71_RS02630 0.26 -0.6 590,392 + QEN71_RS02630 0.26 -1.5 590,392 + QEN71_RS02630 0.26 +2.1 590,393 - QEN71_RS02630 0.26 -0.2 590,393 - QEN71_RS02630 0.26 -1.2 590,393 - QEN71_RS02630 0.26 +0.2 590,393 - QEN71_RS02630 0.26 +1.2 590,393 - QEN71_RS02630 0.26 -0.3 590,393 - QEN71_RS02630 0.26 -0.4 590,393 - QEN71_RS02630 0.26 +0.1 590,393 - QEN71_RS02630 0.26 -0.0 590,393 - QEN71_RS02630 0.26 +0.8 590,393 - QEN71_RS02630 0.26 -0.3 590,393 - QEN71_RS02630 0.26 -0.7 590,428 + QEN71_RS02630 0.28 -0.0 590,429 - QEN71_RS02630 0.28 +0.9 590,429 - QEN71_RS02630 0.28 -1.6 590,485 + QEN71_RS02630 0.32 -0.4 590,485 + QEN71_RS02630 0.32 +0.0 590,485 + QEN71_RS02630 0.32 +0.3 590,485 + QEN71_RS02630 0.32 -0.0 590,485 + QEN71_RS02630 0.32 +2.1 590,486 - QEN71_RS02630 0.32 -2.3 590,486 - QEN71_RS02630 0.32 -1.0 590,486 - QEN71_RS02630 0.32 +0.1 590,486 - QEN71_RS02630 0.32 +0.4 590,486 - QEN71_RS02630 0.32 -0.1 590,486 - QEN71_RS02630 0.32 +0.0 590,536 + QEN71_RS02630 0.36 -1.4 590,536 + QEN71_RS02630 0.36 -1.2 590,536 + QEN71_RS02630 0.36 +0.1 590,536 + QEN71_RS02630 0.36 +0.1 590,536 + QEN71_RS02630 0.36 -0.4 590,536 + QEN71_RS02630 0.36 +0.2 590,536 + QEN71_RS02630 0.36 -1.8 590,537 - QEN71_RS02630 0.36 +0.2 590,537 - QEN71_RS02630 0.36 +0.9 590,537 - QEN71_RS02630 0.36 -0.1 590,537 - QEN71_RS02630 0.36 +0.3 590,537 - QEN71_RS02630 0.36 +1.1 590,576 + QEN71_RS02630 0.39 +0.4 590,576 + QEN71_RS02630 0.39 -1.1 590,576 + QEN71_RS02630 0.39 -0.9 590,576 + QEN71_RS02630 0.39 -0.2 590,576 + QEN71_RS02630 0.39 +0.7 590,576 + QEN71_RS02630 0.39 +0.4 590,576 + QEN71_RS02630 0.39 +0.1 590,577 - QEN71_RS02630 0.39 +0.4 590,577 - QEN71_RS02630 0.39 +0.5 590,703 - QEN71_RS02630 0.48 +0.5 590,789 + QEN71_RS02630 0.54 -0.2 590,789 + QEN71_RS02630 0.54 -0.2 590,790 - QEN71_RS02630 0.54 -0.1
Or see this region's nucleotide sequence