Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01450 and QEN71_RS01455 overlap by 4 nucleotides QEN71_RS01455 and QEN71_RS01460 are separated by 194 nucleotides QEN71_RS01460 and QEN71_RS01465 are separated by 21 nucleotides QEN71_RS01465 and QEN71_RS01470 are separated by 155 nucleotides QEN71_RS01470 and QEN71_RS01475 overlap by 28 nucleotides
QEN71_RS01450: QEN71_RS01450 - rhodanese-like domain-containing protein, at 326,325 to 326,750
_RS01450
QEN71_RS01455: QEN71_RS01455 - glutaredoxin 3, at 326,747 to 327,010
_RS01455
QEN71_RS01460: QEN71_RS01460 - protein-export chaperone SecB, at 327,205 to 327,675
_RS01460
QEN71_RS01465: QEN71_RS01465 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 327,697 to 328,695
_RS01465
QEN71_RS01470: QEN71_RS01470 - O-acetyl-ADP-ribose deacetylase, at 328,851 to 329,402
_RS01470
QEN71_RS01475: QEN71_RS01475 - tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL, at 329,375 to 329,845
_RS01475
Position (kb) 327
328
329 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 326.752 kb on + strand at 326.752 kb on + strand at 326.752 kb on + strand at 326.752 kb on + strand at 326.752 kb on + strand at 326.752 kb on + strand at 326.752 kb on + strand at 326.752 kb on + strand at 326.753 kb on - strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.765 kb on + strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.766 kb on - strand at 326.787 kb on - strand, within QEN71_RS01455 at 326.808 kb on + strand, within QEN71_RS01455 at 326.808 kb on + strand, within QEN71_RS01455 at 326.808 kb on + strand, within QEN71_RS01455 at 326.809 kb on - strand, within QEN71_RS01455 at 326.809 kb on - strand, within QEN71_RS01455 at 326.809 kb on - strand, within QEN71_RS01455 at 326.811 kb on + strand, within QEN71_RS01455 at 326.811 kb on + strand, within QEN71_RS01455 at 326.811 kb on + strand, within QEN71_RS01455 at 326.811 kb on + strand, within QEN71_RS01455 at 326.811 kb on + strand, within QEN71_RS01455 at 326.811 kb on + strand, within QEN71_RS01455 at 326.811 kb on + strand, within QEN71_RS01455 at 326.812 kb on - strand, within QEN71_RS01455 at 326.812 kb on - strand, within QEN71_RS01455 at 326.812 kb on - strand, within QEN71_RS01455 at 326.812 kb on - strand, within QEN71_RS01455 at 326.812 kb on - strand, within QEN71_RS01455 at 326.812 kb on - strand, within QEN71_RS01455 at 326.902 kb on + strand, within QEN71_RS01455 at 326.903 kb on - strand, within QEN71_RS01455 at 326.903 kb on - strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.918 kb on + strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.919 kb on - strand, within QEN71_RS01455 at 326.946 kb on - strand, within QEN71_RS01455 at 326.946 kb on - strand, within QEN71_RS01455 at 326.946 kb on - strand, within QEN71_RS01455 at 327.070 kb on + strand at 327.070 kb on + strand at 327.071 kb on - strand at 327.071 kb on - strand at 327.071 kb on - strand at 327.071 kb on - strand at 327.071 kb on - strand at 327.098 kb on + strand at 327.098 kb on + strand at 327.098 kb on + strand at 327.189 kb on + strand at 327.190 kb on - strand at 327.196 kb on + strand at 327.196 kb on + strand at 327.196 kb on + strand at 327.196 kb on + strand at 327.196 kb on + strand at 327.197 kb on - strand at 327.197 kb on - strand at 327.197 kb on - strand at 327.197 kb on - strand at 327.197 kb on - strand at 327.197 kb on - strand at 327.250 kb on + strand at 327.250 kb on + strand at 327.250 kb on + strand at 327.250 kb on + strand at 327.250 kb on + strand at 327.251 kb on - strand at 327.251 kb on - strand at 327.251 kb on - strand at 327.251 kb on - strand at 327.251 kb on - strand at 327.251 kb on - strand at 327.387 kb on + strand, within QEN71_RS01460 at 327.388 kb on - strand, within QEN71_RS01460 at 327.526 kb on + strand, within QEN71_RS01460 at 327.527 kb on - strand, within QEN71_RS01460 at 327.610 kb on + strand, within QEN71_RS01460 at 327.610 kb on + strand, within QEN71_RS01460 at 327.610 kb on + strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.611 kb on - strand, within QEN71_RS01460 at 327.697 kb on - strand at 327.697 kb on - strand at 327.835 kb on + strand, within QEN71_RS01465 at 327.835 kb on + strand, within QEN71_RS01465 at 327.836 kb on - strand, within QEN71_RS01465 at 327.836 kb on - strand, within QEN71_RS01465 at 327.836 kb on - strand, within QEN71_RS01465 at 327.836 kb on - strand, within QEN71_RS01465 at 328.002 kb on + strand, within QEN71_RS01465 at 328.002 kb on + strand, within QEN71_RS01465 at 328.002 kb on + strand, within QEN71_RS01465 at 328.003 kb on - strand, within QEN71_RS01465 at 328.003 kb on - strand, within QEN71_RS01465 at 328.003 kb on - strand, within QEN71_RS01465 at 328.003 kb on - strand, within QEN71_RS01465 at 328.003 kb on - strand, within QEN71_RS01465 at 328.003 kb on - strand, within QEN71_RS01465 at 328.157 kb on + strand, within QEN71_RS01465 at 328.225 kb on + strand, within QEN71_RS01465 at 328.225 kb on + strand, within QEN71_RS01465 at 328.225 kb on + strand, within QEN71_RS01465 at 328.225 kb on + strand, within QEN71_RS01465 at 328.225 kb on + strand, within QEN71_RS01465 at 328.225 kb on + strand, within QEN71_RS01465 at 328.225 kb on + strand, within QEN71_RS01465 at 328.226 kb on - strand, within QEN71_RS01465 at 328.226 kb on - strand, within QEN71_RS01465 at 328.226 kb on - strand, within QEN71_RS01465 at 328.226 kb on - strand, within QEN71_RS01465 at 328.226 kb on - strand, within QEN71_RS01465 at 328.226 kb on - strand, within QEN71_RS01465 at 328.226 kb on - strand, within QEN71_RS01465 at 328.228 kb on - strand, within QEN71_RS01465 at 328.385 kb on + strand, within QEN71_RS01465 at 328.500 kb on + strand, within QEN71_RS01465 at 328.500 kb on + strand, within QEN71_RS01465 at 328.500 kb on + strand, within QEN71_RS01465 at 328.500 kb on + strand, within QEN71_RS01465 at 328.501 kb on - strand, within QEN71_RS01465 at 328.501 kb on - strand, within QEN71_RS01465 at 328.501 kb on - strand, within QEN71_RS01465 at 328.512 kb on + strand, within QEN71_RS01465 at 328.512 kb on + strand, within QEN71_RS01465 at 328.513 kb on - strand, within QEN71_RS01465 at 328.513 kb on - strand, within QEN71_RS01465 at 328.568 kb on + strand, within QEN71_RS01465 at 328.693 kb on + strand at 328.693 kb on + strand at 328.693 kb on + strand at 328.693 kb on + strand at 328.693 kb on + strand at 328.694 kb on - strand at 328.762 kb on + strand at 328.763 kb on - strand at 328.763 kb on - strand at 328.780 kb on + strand at 328.780 kb on + strand at 328.780 kb on + strand at 328.781 kb on - strand at 328.819 kb on - strand at 328.819 kb on - strand at 328.819 kb on - strand at 328.819 kb on - strand at 328.830 kb on - strand at 328.868 kb on + strand at 328.868 kb on + strand at 328.868 kb on + strand at 328.868 kb on + strand at 328.868 kb on + strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 328.869 kb on - strand at 329.226 kb on + strand, within QEN71_RS01470 at 329.226 kb on + strand, within QEN71_RS01470 at 329.227 kb on - strand, within QEN71_RS01470 at 329.227 kb on - strand, within QEN71_RS01470 at 329.300 kb on + strand, within QEN71_RS01470 at 329.349 kb on + strand at 329.349 kb on + strand at 329.350 kb on - strand at 329.350 kb on - strand at 329.350 kb on - strand at 329.350 kb on - strand at 329.685 kb on + strand, within QEN71_RS01475 at 329.685 kb on + strand, within QEN71_RS01475 at 329.685 kb on + strand, within QEN71_RS01475 at 329.686 kb on - strand, within QEN71_RS01475 at 329.686 kb on - strand, within QEN71_RS01475 at 329.694 kb on + strand, within QEN71_RS01475 at 329.694 kb on + strand, within QEN71_RS01475 at 329.695 kb on - strand, within QEN71_RS01475 at 329.695 kb on - strand, within QEN71_RS01475
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 326,752 + +0.1 326,752 + -0.5 326,752 + -0.0 326,752 + -0.2 326,752 + +0.3 326,752 + +0.1 326,752 + -0.7 326,752 + -0.1 326,753 - +0.6 326,765 + -1.0 326,765 + +1.0 326,765 + -0.3 326,765 + +0.5 326,765 + -0.5 326,765 + +0.9 326,765 + -0.1 326,765 + -1.3 326,765 + -0.7 326,765 + +0.1 326,765 + -0.9 326,765 + -0.1 326,765 + +0.0 326,765 + -0.3 326,765 + +0.9 326,765 + -1.1 326,765 + +0.3 326,765 + -0.1 326,765 + +0.0 326,766 - -0.5 326,766 - -1.5 326,766 - -0.6 326,766 - -1.3 326,766 - -1.1 326,766 - -1.0 326,766 - -0.7 326,766 - -0.3 326,766 - -0.3 326,766 - -0.2 326,766 - -0.2 326,766 - -2.3 326,766 - +0.1 326,766 - -1.5 326,766 - -0.4 326,766 - -0.1 326,766 - +0.7 326,766 - -0.3 326,787 - QEN71_RS01455 0.15 -0.7 326,808 + QEN71_RS01455 0.23 -0.1 326,808 + QEN71_RS01455 0.23 -0.9 326,808 + QEN71_RS01455 0.23 -0.0 326,809 - QEN71_RS01455 0.23 +0.1 326,809 - QEN71_RS01455 0.23 -0.5 326,809 - QEN71_RS01455 0.23 -3.7 326,811 + QEN71_RS01455 0.24 -0.9 326,811 + QEN71_RS01455 0.24 +0.2 326,811 + QEN71_RS01455 0.24 -0.4 326,811 + QEN71_RS01455 0.24 -0.2 326,811 + QEN71_RS01455 0.24 -0.3 326,811 + QEN71_RS01455 0.24 +0.0 326,811 + QEN71_RS01455 0.24 -0.3 326,812 - QEN71_RS01455 0.25 -1.9 326,812 - QEN71_RS01455 0.25 +0.1 326,812 - QEN71_RS01455 0.25 -3.6 326,812 - QEN71_RS01455 0.25 -3.1 326,812 - QEN71_RS01455 0.25 -1.1 326,812 - QEN71_RS01455 0.25 -2.5 326,902 + QEN71_RS01455 0.59 +0.4 326,903 - QEN71_RS01455 0.59 -0.9 326,903 - QEN71_RS01455 0.59 -2.6 326,918 + QEN71_RS01455 0.65 -0.2 326,918 + QEN71_RS01455 0.65 +0.4 326,918 + QEN71_RS01455 0.65 -0.7 326,918 + QEN71_RS01455 0.65 +0.3 326,918 + QEN71_RS01455 0.65 -0.4 326,918 + QEN71_RS01455 0.65 -0.7 326,918 + QEN71_RS01455 0.65 +0.8 326,918 + QEN71_RS01455 0.65 +0.4 326,918 + QEN71_RS01455 0.65 -1.1 326,918 + QEN71_RS01455 0.65 -0.2 326,918 + QEN71_RS01455 0.65 +0.7 326,918 + QEN71_RS01455 0.65 +0.8 326,919 - QEN71_RS01455 0.65 -2.3 326,919 - QEN71_RS01455 0.65 -2.6 326,919 - QEN71_RS01455 0.65 -0.3 326,919 - QEN71_RS01455 0.65 -1.3 326,919 - QEN71_RS01455 0.65 -3.2 326,919 - QEN71_RS01455 0.65 -3.5 326,919 - QEN71_RS01455 0.65 -3.5 326,919 - QEN71_RS01455 0.65 -2.1 326,919 - QEN71_RS01455 0.65 -1.7 326,919 - QEN71_RS01455 0.65 -1.6 326,946 - QEN71_RS01455 0.75 -0.9 326,946 - QEN71_RS01455 0.75 -2.2 326,946 - QEN71_RS01455 0.75 -1.5 327,070 + +0.2 327,070 + +0.5 327,071 - -2.7 327,071 - -2.8 327,071 - -3.5 327,071 - -2.7 327,071 - -2.0 327,098 + +0.1 327,098 + +0.0 327,098 + +0.3 327,189 + -2.6 327,190 - +0.1 327,196 + +0.7 327,196 + -0.8 327,196 + -1.6 327,196 + -0.0 327,196 + -0.2 327,197 - -2.9 327,197 - -3.5 327,197 - -0.5 327,197 - -1.8 327,197 - -2.6 327,197 - -2.2 327,250 + -0.7 327,250 + -2.1 327,250 + -1.7 327,250 + -2.7 327,250 + -0.2 327,251 - -0.5 327,251 - -0.7 327,251 - -2.0 327,251 - -2.9 327,251 - -0.7 327,251 - -0.5 327,387 + QEN71_RS01460 0.39 -3.1 327,388 - QEN71_RS01460 0.39 -1.1 327,526 + QEN71_RS01460 0.68 +0.1 327,527 - QEN71_RS01460 0.68 -2.5 327,610 + QEN71_RS01460 0.86 -2.2 327,610 + QEN71_RS01460 0.86 -3.6 327,610 + QEN71_RS01460 0.86 -2.2 327,611 - QEN71_RS01460 0.86 -5.4 327,611 - QEN71_RS01460 0.86 -1.4 327,611 - QEN71_RS01460 0.86 -2.8 327,611 - QEN71_RS01460 0.86 -3.6 327,611 - QEN71_RS01460 0.86 -4.1 327,611 - QEN71_RS01460 0.86 -4.2 327,611 - QEN71_RS01460 0.86 -6.7 327,611 - QEN71_RS01460 0.86 -3.1 327,697 - -3.8 327,697 - -1.7 327,835 + QEN71_RS01465 0.14 -4.6 327,835 + QEN71_RS01465 0.14 -3.1 327,836 - QEN71_RS01465 0.14 -5.7 327,836 - QEN71_RS01465 0.14 -6.3 327,836 - QEN71_RS01465 0.14 -3.8 327,836 - QEN71_RS01465 0.14 -4.5 328,002 + QEN71_RS01465 0.31 -5.5 328,002 + QEN71_RS01465 0.31 -3.2 328,002 + QEN71_RS01465 0.31 -4.5 328,003 - QEN71_RS01465 0.31 -6.7 328,003 - QEN71_RS01465 0.31 -3.6 328,003 - QEN71_RS01465 0.31 -3.6 328,003 - QEN71_RS01465 0.31 -4.8 328,003 - QEN71_RS01465 0.31 -4.1 328,003 - QEN71_RS01465 0.31 -0.2 328,157 + QEN71_RS01465 0.46 -5.6 328,225 + QEN71_RS01465 0.53 -5.1 328,225 + QEN71_RS01465 0.53 -3.2 328,225 + QEN71_RS01465 0.53 -3.1 328,225 + QEN71_RS01465 0.53 -4.7 328,225 + QEN71_RS01465 0.53 -3.4 328,225 + QEN71_RS01465 0.53 -5.2 328,225 + QEN71_RS01465 0.53 -3.3 328,226 - QEN71_RS01465 0.53 -4.0 328,226 - QEN71_RS01465 0.53 -5.5 328,226 - QEN71_RS01465 0.53 -5.1 328,226 - QEN71_RS01465 0.53 -4.7 328,226 - QEN71_RS01465 0.53 -4.6 328,226 - QEN71_RS01465 0.53 -3.8 328,226 - QEN71_RS01465 0.53 -5.6 328,228 - QEN71_RS01465 0.53 -3.5 328,385 + QEN71_RS01465 0.69 -3.3 328,500 + QEN71_RS01465 0.80 -5.0 328,500 + QEN71_RS01465 0.80 -4.5 328,500 + QEN71_RS01465 0.80 -6.3 328,500 + QEN71_RS01465 0.80 -4.0 328,501 - QEN71_RS01465 0.80 -4.0 328,501 - QEN71_RS01465 0.80 -5.2 328,501 - QEN71_RS01465 0.80 -4.0 328,512 + QEN71_RS01465 0.82 -5.4 328,512 + QEN71_RS01465 0.82 -3.8 328,513 - QEN71_RS01465 0.82 -4.6 328,513 - QEN71_RS01465 0.82 -6.0 328,568 + QEN71_RS01465 0.87 -6.7 328,693 + +1.1 328,693 + +0.2 328,693 + -0.2 328,693 + +0.7 328,693 + +1.4 328,694 - +0.5 328,762 + +0.3 328,763 - -0.3 328,763 - -1.4 328,780 + -0.9 328,780 + -0.2 328,780 + +0.6 328,781 - +0.2 328,819 - -0.2 328,819 - +0.2 328,819 - -0.5 328,819 - -0.3 328,830 - +0.4 328,868 + -0.7 328,868 + +1.0 328,868 + -1.6 328,868 + +0.1 328,868 + +0.5 328,869 - +0.9 328,869 - -1.2 328,869 - +0.1 328,869 - -1.6 328,869 - +0.3 328,869 - -0.2 328,869 - +0.1 328,869 - +0.4 328,869 - +0.5 328,869 - +1.3 329,226 + QEN71_RS01470 0.68 +1.8 329,226 + QEN71_RS01470 0.68 +0.1 329,227 - QEN71_RS01470 0.68 -0.3 329,227 - QEN71_RS01470 0.68 -1.7 329,300 + QEN71_RS01470 0.81 -0.9 329,349 + -0.5 329,349 + -0.0 329,350 - +1.1 329,350 - -0.9 329,350 - +0.8 329,350 - -0.6 329,685 + QEN71_RS01475 0.66 +0.8 329,685 + QEN71_RS01475 0.66 -1.1 329,685 + QEN71_RS01475 0.66 -0.2 329,686 - QEN71_RS01475 0.66 -0.7 329,686 - QEN71_RS01475 0.66 -0.7 329,694 + QEN71_RS01475 0.68 +0.4 329,694 + QEN71_RS01475 0.68 +0.7 329,695 - QEN71_RS01475 0.68 -0.2 329,695 - QEN71_RS01475 0.68 -0.1
Or see this region's nucleotide sequence