Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS01360 and QEN71_RS01365 are separated by 363 nucleotides QEN71_RS01365 and QEN71_RS01370 are separated by 3 nucleotides
QEN71_RS01360: QEN71_RS01360 - ABC transporter ATP-binding protein, at 304,679 to 305,752
_RS01360
QEN71_RS01365: QEN71_RS01365 - dicarboxylate/amino acid:cation symporter, at 306,116 to 307,396
_RS01365
QEN71_RS01370: QEN71_RS01370 - ATP-binding protein, at 307,400 to 309,424
_RS01370
Position (kb) 306
307
308 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 305.230 kb on + strand, within QEN71_RS01360 at 305.231 kb on - strand, within QEN71_RS01360 at 305.231 kb on - strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.342 kb on + strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.343 kb on - strand, within QEN71_RS01360 at 305.348 kb on + strand, within QEN71_RS01360 at 305.348 kb on + strand, within QEN71_RS01360 at 305.349 kb on - strand, within QEN71_RS01360 at 305.349 kb on - strand, within QEN71_RS01360 at 305.647 kb on + strand at 305.648 kb on - strand at 305.750 kb on + strand at 305.750 kb on + strand at 305.751 kb on - strand at 305.751 kb on - strand at 305.751 kb on - strand at 305.751 kb on - strand at 305.761 kb on - strand at 305.768 kb on - strand at 305.881 kb on - strand at 305.891 kb on + strand at 305.916 kb on + strand at 305.941 kb on + strand at 305.942 kb on - strand at 305.942 kb on - strand at 306.093 kb on + strand at 306.093 kb on + strand at 306.093 kb on + strand at 306.093 kb on - strand at 306.094 kb on - strand at 306.127 kb on + strand at 306.127 kb on + strand at 306.127 kb on - strand at 306.128 kb on - strand at 306.128 kb on - strand at 306.128 kb on - strand at 306.128 kb on - strand at 306.128 kb on - strand at 306.128 kb on - strand at 306.128 kb on - strand at 306.128 kb on - strand at 306.131 kb on + strand at 306.131 kb on + strand at 306.131 kb on + strand at 306.131 kb on + strand at 306.131 kb on + strand at 306.131 kb on + strand at 306.132 kb on - strand at 306.132 kb on - strand at 306.132 kb on - strand at 306.132 kb on - strand at 306.134 kb on - strand at 306.143 kb on + strand at 306.143 kb on + strand at 306.143 kb on + strand at 306.143 kb on + strand at 306.143 kb on + strand at 306.144 kb on - strand at 306.195 kb on - strand at 306.195 kb on - strand at 306.195 kb on - strand at 306.280 kb on + strand, within QEN71_RS01365 at 306.281 kb on - strand, within QEN71_RS01365 at 306.281 kb on - strand, within QEN71_RS01365 at 306.281 kb on - strand, within QEN71_RS01365 at 306.281 kb on - strand, within QEN71_RS01365 at 306.353 kb on + strand, within QEN71_RS01365 at 306.353 kb on + strand, within QEN71_RS01365 at 306.353 kb on + strand, within QEN71_RS01365 at 306.354 kb on - strand, within QEN71_RS01365 at 306.746 kb on + strand, within QEN71_RS01365 at 306.746 kb on + strand, within QEN71_RS01365 at 306.746 kb on + strand, within QEN71_RS01365 at 306.747 kb on - strand, within QEN71_RS01365 at 306.747 kb on - strand, within QEN71_RS01365 at 306.747 kb on - strand, within QEN71_RS01365 at 306.794 kb on + strand, within QEN71_RS01365 at 306.794 kb on + strand, within QEN71_RS01365 at 306.794 kb on + strand, within QEN71_RS01365 at 306.794 kb on + strand, within QEN71_RS01365 at 306.794 kb on + strand, within QEN71_RS01365 at 306.794 kb on + strand, within QEN71_RS01365 at 306.794 kb on + strand, within QEN71_RS01365 at 306.795 kb on - strand, within QEN71_RS01365 at 306.795 kb on - strand, within QEN71_RS01365 at 306.795 kb on - strand, within QEN71_RS01365 at 306.878 kb on + strand, within QEN71_RS01365 at 306.878 kb on + strand, within QEN71_RS01365 at 306.878 kb on + strand, within QEN71_RS01365 at 306.878 kb on + strand, within QEN71_RS01365 at 306.879 kb on - strand, within QEN71_RS01365 at 306.879 kb on - strand, within QEN71_RS01365 at 307.008 kb on - strand, within QEN71_RS01365 at 307.037 kb on + strand, within QEN71_RS01365 at 307.037 kb on + strand, within QEN71_RS01365 at 307.037 kb on + strand, within QEN71_RS01365 at 307.037 kb on + strand, within QEN71_RS01365 at 307.037 kb on + strand, within QEN71_RS01365 at 307.037 kb on + strand, within QEN71_RS01365 at 307.037 kb on + strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.038 kb on - strand, within QEN71_RS01365 at 307.040 kb on - strand, within QEN71_RS01365 at 307.368 kb on + strand at 307.368 kb on + strand at 307.368 kb on + strand at 307.368 kb on + strand at 307.369 kb on - strand at 307.441 kb on + strand at 307.441 kb on + strand at 307.442 kb on - strand at 307.442 kb on - strand at 307.487 kb on + strand at 307.487 kb on + strand at 307.497 kb on + strand at 307.497 kb on + strand at 307.497 kb on + strand at 307.497 kb on + strand at 307.497 kb on + strand at 307.498 kb on - strand at 307.498 kb on - strand at 307.498 kb on - strand at 307.694 kb on + strand, within QEN71_RS01370 at 307.695 kb on - strand, within QEN71_RS01370 at 307.709 kb on + strand, within QEN71_RS01370 at 307.709 kb on + strand, within QEN71_RS01370 at 307.709 kb on + strand, within QEN71_RS01370 at 307.709 kb on + strand, within QEN71_RS01370 at 307.709 kb on + strand, within QEN71_RS01370 at 307.709 kb on + strand, within QEN71_RS01370 at 307.710 kb on - strand, within QEN71_RS01370 at 307.710 kb on - strand, within QEN71_RS01370 at 307.710 kb on - strand, within QEN71_RS01370 at 307.710 kb on - strand, within QEN71_RS01370 at 307.710 kb on - strand, within QEN71_RS01370 at 307.710 kb on - strand, within QEN71_RS01370 at 307.787 kb on + strand, within QEN71_RS01370 at 307.787 kb on + strand, within QEN71_RS01370 at 307.787 kb on + strand, within QEN71_RS01370 at 307.788 kb on - strand, within QEN71_RS01370 at 307.788 kb on - strand, within QEN71_RS01370 at 307.788 kb on - strand, within QEN71_RS01370 at 307.788 kb on - strand, within QEN71_RS01370 at 307.829 kb on + strand, within QEN71_RS01370 at 307.904 kb on + strand, within QEN71_RS01370 at 307.904 kb on + strand, within QEN71_RS01370 at 307.904 kb on + strand, within QEN71_RS01370 at 307.904 kb on + strand, within QEN71_RS01370 at 307.904 kb on + strand, within QEN71_RS01370 at 307.904 kb on + strand, within QEN71_RS01370 at 307.905 kb on - strand, within QEN71_RS01370 at 307.905 kb on - strand, within QEN71_RS01370 at 307.905 kb on - strand, within QEN71_RS01370 at 307.919 kb on + strand, within QEN71_RS01370 at 307.919 kb on + strand, within QEN71_RS01370 at 307.992 kb on - strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.994 kb on + strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 307.995 kb on - strand, within QEN71_RS01370 at 308.150 kb on + strand, within QEN71_RS01370 at 308.150 kb on + strand, within QEN71_RS01370 at 308.151 kb on - strand, within QEN71_RS01370 at 308.151 kb on - strand, within QEN71_RS01370 at 308.151 kb on - strand, within QEN71_RS01370 at 308.151 kb on - strand, within QEN71_RS01370 at 308.170 kb on + strand, within QEN71_RS01370 at 308.170 kb on + strand, within QEN71_RS01370 at 308.171 kb on - strand, within QEN71_RS01370 at 308.171 kb on - strand, within QEN71_RS01370 at 308.195 kb on + strand, within QEN71_RS01370 at 308.195 kb on + strand, within QEN71_RS01370 at 308.195 kb on + strand, within QEN71_RS01370 at 308.196 kb on - strand, within QEN71_RS01370 at 308.196 kb on - strand, within QEN71_RS01370 at 308.196 kb on - strand, within QEN71_RS01370 at 308.196 kb on - strand, within QEN71_RS01370 at 308.196 kb on - strand, within QEN71_RS01370 at 308.196 kb on - strand, within QEN71_RS01370 at 308.196 kb on - strand, within QEN71_RS01370 at 308.210 kb on + strand, within QEN71_RS01370 at 308.211 kb on - strand, within QEN71_RS01370 at 308.309 kb on + strand, within QEN71_RS01370 at 308.310 kb on - strand, within QEN71_RS01370
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 305,230 + QEN71_RS01360 0.51 -1.5 305,231 - QEN71_RS01360 0.51 -0.9 305,231 - QEN71_RS01360 0.51 -0.4 305,342 + QEN71_RS01360 0.62 -0.5 305,342 + QEN71_RS01360 0.62 -0.5 305,342 + QEN71_RS01360 0.62 -0.1 305,342 + QEN71_RS01360 0.62 -0.5 305,342 + QEN71_RS01360 0.62 +0.4 305,342 + QEN71_RS01360 0.62 +0.3 305,342 + QEN71_RS01360 0.62 +0.7 305,342 + QEN71_RS01360 0.62 +0.4 305,342 + QEN71_RS01360 0.62 -0.3 305,342 + QEN71_RS01360 0.62 +0.0 305,342 + QEN71_RS01360 0.62 -0.7 305,342 + QEN71_RS01360 0.62 -0.4 305,342 + QEN71_RS01360 0.62 -0.8 305,343 - QEN71_RS01360 0.62 -1.4 305,343 - QEN71_RS01360 0.62 +0.6 305,343 - QEN71_RS01360 0.62 -1.1 305,343 - QEN71_RS01360 0.62 -0.7 305,343 - QEN71_RS01360 0.62 +0.5 305,343 - QEN71_RS01360 0.62 +3.1 305,343 - QEN71_RS01360 0.62 +0.1 305,343 - QEN71_RS01360 0.62 -0.4 305,343 - QEN71_RS01360 0.62 -1.1 305,343 - QEN71_RS01360 0.62 -0.7 305,343 - QEN71_RS01360 0.62 +1.3 305,348 + QEN71_RS01360 0.62 -0.5 305,348 + QEN71_RS01360 0.62 -1.8 305,349 - QEN71_RS01360 0.62 -0.6 305,349 - QEN71_RS01360 0.62 +0.9 305,647 + -0.7 305,648 - +0.4 305,750 + +0.5 305,750 + -0.5 305,751 - -0.6 305,751 - +0.1 305,751 - -0.9 305,751 - -0.3 305,761 - -1.3 305,768 - -0.3 305,881 - -1.3 305,891 + -1.9 305,916 + +1.2 305,941 + +0.1 305,942 - -1.4 305,942 - -1.3 306,093 + +0.1 306,093 + +1.2 306,093 + +0.9 306,093 - -1.1 306,094 - -0.9 306,127 + -0.5 306,127 + -3.8 306,127 - +0.1 306,128 - -1.5 306,128 - -2.1 306,128 - -1.6 306,128 - -1.4 306,128 - -2.5 306,128 - -1.1 306,128 - -2.8 306,128 - -1.9 306,131 + -2.2 306,131 + -2.0 306,131 + -3.1 306,131 + -3.0 306,131 + -2.4 306,131 + +0.1 306,132 - -0.3 306,132 - -1.1 306,132 - -1.8 306,132 - -3.0 306,134 - -2.8 306,143 + -2.6 306,143 + -3.7 306,143 + -2.7 306,143 + -2.4 306,143 + -1.3 306,144 - -1.1 306,195 - -4.2 306,195 - +0.1 306,195 - -0.5 306,280 + QEN71_RS01365 0.13 -0.3 306,281 - QEN71_RS01365 0.13 -2.5 306,281 - QEN71_RS01365 0.13 -0.6 306,281 - QEN71_RS01365 0.13 -0.7 306,281 - QEN71_RS01365 0.13 -1.9 306,353 + QEN71_RS01365 0.19 -3.4 306,353 + QEN71_RS01365 0.19 +0.1 306,353 + QEN71_RS01365 0.19 -2.6 306,354 - QEN71_RS01365 0.19 -0.9 306,746 + QEN71_RS01365 0.49 -1.5 306,746 + QEN71_RS01365 0.49 -4.1 306,746 + QEN71_RS01365 0.49 -2.8 306,747 - QEN71_RS01365 0.49 -3.7 306,747 - QEN71_RS01365 0.49 -2.6 306,747 - QEN71_RS01365 0.49 -3.2 306,794 + QEN71_RS01365 0.53 -3.9 306,794 + QEN71_RS01365 0.53 -2.6 306,794 + QEN71_RS01365 0.53 -1.9 306,794 + QEN71_RS01365 0.53 -2.2 306,794 + QEN71_RS01365 0.53 -2.0 306,794 + QEN71_RS01365 0.53 -1.1 306,794 + QEN71_RS01365 0.53 +0.1 306,795 - QEN71_RS01365 0.53 +0.1 306,795 - QEN71_RS01365 0.53 -2.0 306,795 - QEN71_RS01365 0.53 -3.5 306,878 + QEN71_RS01365 0.59 +0.1 306,878 + QEN71_RS01365 0.59 -1.4 306,878 + QEN71_RS01365 0.59 -2.9 306,878 + QEN71_RS01365 0.59 -4.7 306,879 - QEN71_RS01365 0.60 -2.8 306,879 - QEN71_RS01365 0.60 -1.0 307,008 - QEN71_RS01365 0.70 -1.5 307,037 + QEN71_RS01365 0.72 -3.9 307,037 + QEN71_RS01365 0.72 -3.3 307,037 + QEN71_RS01365 0.72 -0.9 307,037 + QEN71_RS01365 0.72 -1.0 307,037 + QEN71_RS01365 0.72 -0.1 307,037 + QEN71_RS01365 0.72 -2.2 307,037 + QEN71_RS01365 0.72 -3.1 307,038 - QEN71_RS01365 0.72 -0.3 307,038 - QEN71_RS01365 0.72 -1.9 307,038 - QEN71_RS01365 0.72 -1.9 307,038 - QEN71_RS01365 0.72 -1.6 307,038 - QEN71_RS01365 0.72 -2.5 307,038 - QEN71_RS01365 0.72 -1.4 307,038 - QEN71_RS01365 0.72 -1.5 307,038 - QEN71_RS01365 0.72 +0.1 307,040 - QEN71_RS01365 0.72 -2.7 307,368 + +0.1 307,368 + -0.6 307,368 + -1.6 307,368 + -0.6 307,369 - -1.3 307,441 + -0.0 307,441 + +0.7 307,442 - +1.1 307,442 - +0.1 307,487 + +0.7 307,487 + -2.3 307,497 + +0.1 307,497 + +0.0 307,497 + +0.5 307,497 + +1.7 307,497 + +0.6 307,498 - -1.3 307,498 - -0.8 307,498 - -1.4 307,694 + QEN71_RS01370 0.15 -2.1 307,695 - QEN71_RS01370 0.15 -2.8 307,709 + QEN71_RS01370 0.15 -0.5 307,709 + QEN71_RS01370 0.15 -0.7 307,709 + QEN71_RS01370 0.15 -2.9 307,709 + QEN71_RS01370 0.15 -2.1 307,709 + QEN71_RS01370 0.15 -0.3 307,709 + QEN71_RS01370 0.15 -3.3 307,710 - QEN71_RS01370 0.15 +0.1 307,710 - QEN71_RS01370 0.15 -0.9 307,710 - QEN71_RS01370 0.15 -0.9 307,710 - QEN71_RS01370 0.15 -1.8 307,710 - QEN71_RS01370 0.15 -1.9 307,710 - QEN71_RS01370 0.15 -2.5 307,787 + QEN71_RS01370 0.19 -1.0 307,787 + QEN71_RS01370 0.19 -0.3 307,787 + QEN71_RS01370 0.19 -0.3 307,788 - QEN71_RS01370 0.19 -2.2 307,788 - QEN71_RS01370 0.19 -2.4 307,788 - QEN71_RS01370 0.19 -1.3 307,788 - QEN71_RS01370 0.19 -0.3 307,829 + QEN71_RS01370 0.21 -0.3 307,904 + QEN71_RS01370 0.25 -2.0 307,904 + QEN71_RS01370 0.25 -2.6 307,904 + QEN71_RS01370 0.25 +1.1 307,904 + QEN71_RS01370 0.25 -2.5 307,904 + QEN71_RS01370 0.25 -1.7 307,904 + QEN71_RS01370 0.25 -0.5 307,905 - QEN71_RS01370 0.25 -4.8 307,905 - QEN71_RS01370 0.25 -1.6 307,905 - QEN71_RS01370 0.25 -1.2 307,919 + QEN71_RS01370 0.26 -0.7 307,919 + QEN71_RS01370 0.26 -2.3 307,992 - QEN71_RS01370 0.29 -2.1 307,994 + QEN71_RS01370 0.29 -0.9 307,994 + QEN71_RS01370 0.29 +0.6 307,994 + QEN71_RS01370 0.29 -0.7 307,994 + QEN71_RS01370 0.29 +0.1 307,994 + QEN71_RS01370 0.29 -1.2 307,994 + QEN71_RS01370 0.29 -3.1 307,994 + QEN71_RS01370 0.29 -2.3 307,994 + QEN71_RS01370 0.29 -0.3 307,994 + QEN71_RS01370 0.29 -0.3 307,994 + QEN71_RS01370 0.29 -0.8 307,994 + QEN71_RS01370 0.29 -2.4 307,994 + QEN71_RS01370 0.29 +0.1 307,994 + QEN71_RS01370 0.29 -0.3 307,994 + QEN71_RS01370 0.29 -1.2 307,994 + QEN71_RS01370 0.29 -0.2 307,995 - QEN71_RS01370 0.29 -0.5 307,995 - QEN71_RS01370 0.29 -2.8 307,995 - QEN71_RS01370 0.29 -2.2 307,995 - QEN71_RS01370 0.29 -0.4 307,995 - QEN71_RS01370 0.29 -1.6 307,995 - QEN71_RS01370 0.29 -0.9 307,995 - QEN71_RS01370 0.29 -2.3 307,995 - QEN71_RS01370 0.29 -2.7 307,995 - QEN71_RS01370 0.29 -3.1 307,995 - QEN71_RS01370 0.29 -1.6 307,995 - QEN71_RS01370 0.29 -0.5 307,995 - QEN71_RS01370 0.29 -2.3 308,150 + QEN71_RS01370 0.37 -0.9 308,150 + QEN71_RS01370 0.37 -2.0 308,151 - QEN71_RS01370 0.37 -3.5 308,151 - QEN71_RS01370 0.37 -2.1 308,151 - QEN71_RS01370 0.37 -0.1 308,151 - QEN71_RS01370 0.37 -3.0 308,170 + QEN71_RS01370 0.38 -2.4 308,170 + QEN71_RS01370 0.38 +0.1 308,171 - QEN71_RS01370 0.38 -2.3 308,171 - QEN71_RS01370 0.38 -1.3 308,195 + QEN71_RS01370 0.39 -1.5 308,195 + QEN71_RS01370 0.39 -0.4 308,195 + QEN71_RS01370 0.39 -0.5 308,196 - QEN71_RS01370 0.39 -0.8 308,196 - QEN71_RS01370 0.39 -1.7 308,196 - QEN71_RS01370 0.39 -0.3 308,196 - QEN71_RS01370 0.39 -2.2 308,196 - QEN71_RS01370 0.39 -2.7 308,196 - QEN71_RS01370 0.39 -3.2 308,196 - QEN71_RS01370 0.39 -2.8 308,210 + QEN71_RS01370 0.40 -1.1 308,211 - QEN71_RS01370 0.40 +0.8 308,309 + QEN71_RS01370 0.45 +0.1 308,310 - QEN71_RS01370 0.45 -1.3
Or see this region's nucleotide sequence