Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37030 and QEN71_RS37035 are separated by 494 nucleotides QEN71_RS37035 and QEN71_RS37040 are separated by 15 nucleotides QEN71_RS37040 and QEN71_RS37045 are separated by 92 nucleotides
QEN71_RS37030: QEN71_RS37030 - peptidase S10, at 1,677,955 to 1,679,769
_RS37030
QEN71_RS37035: QEN71_RS37035 - ankyrin repeat domain-containing protein, at 1,680,264 to 1,680,932
_RS37035
QEN71_RS37040: QEN71_RS37040 - c-type cytochrome, at 1,680,948 to 1,681,487
_RS37040
QEN71_RS37045: QEN71_RS37045 - PQQ-binding-like beta-propeller repeat protein, at 1,681,580 to 1,683,313
_RS37045
Position (kb)
1680
1681 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1679.323 kb on - strand, within QEN71_RS37030 at 1679.381 kb on + strand, within QEN71_RS37030 at 1679.448 kb on - strand, within QEN71_RS37030 at 1679.448 kb on - strand, within QEN71_RS37030 at 1679.480 kb on + strand, within QEN71_RS37030 at 1679.565 kb on - strand, within QEN71_RS37030 at 1679.565 kb on - strand, within QEN71_RS37030 at 1679.784 kb on + strand at 1679.785 kb on - strand at 1679.799 kb on + strand at 1679.800 kb on - strand at 1680.032 kb on - strand at 1680.204 kb on + strand at 1680.470 kb on + strand, within QEN71_RS37035 at 1680.524 kb on - strand, within QEN71_RS37035 at 1680.524 kb on - strand, within QEN71_RS37035 at 1680.913 kb on + strand at 1680.914 kb on - strand at 1680.968 kb on - strand at 1680.968 kb on - strand at 1681.081 kb on + strand, within QEN71_RS37040 at 1681.081 kb on + strand, within QEN71_RS37040 at 1681.082 kb on - strand, within QEN71_RS37040 at 1681.082 kb on - strand, within QEN71_RS37040 at 1681.087 kb on + strand, within QEN71_RS37040 at 1681.088 kb on - strand, within QEN71_RS37040 at 1681.210 kb on + strand, within QEN71_RS37040 at 1681.211 kb on - strand, within QEN71_RS37040 at 1681.345 kb on + strand, within QEN71_RS37040 at 1681.345 kb on + strand, within QEN71_RS37040 at 1681.346 kb on - strand, within QEN71_RS37040 at 1681.346 kb on - strand, within QEN71_RS37040 at 1681.351 kb on + strand, within QEN71_RS37040 at 1681.352 kb on - strand, within QEN71_RS37040 at 1681.352 kb on - strand, within QEN71_RS37040 at 1681.633 kb on + strand at 1681.634 kb on - strand at 1681.659 kb on + strand at 1681.660 kb on - strand at 1681.660 kb on - strand at 1681.678 kb on + strand at 1681.680 kb on + strand at 1681.681 kb on - strand at 1681.681 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 1,679,323 - QEN71_RS37030 0.75 -0.5 1,679,381 + QEN71_RS37030 0.79 +0.5 1,679,448 - QEN71_RS37030 0.82 -0.6 1,679,448 - QEN71_RS37030 0.82 -0.4 1,679,480 + QEN71_RS37030 0.84 -0.5 1,679,565 - QEN71_RS37030 0.89 +0.7 1,679,565 - QEN71_RS37030 0.89 -0.2 1,679,784 + +1.6 1,679,785 - -0.2 1,679,799 + -1.0 1,679,800 - -0.9 1,680,032 - +0.4 1,680,204 + +0.9 1,680,470 + QEN71_RS37035 0.31 +0.1 1,680,524 - QEN71_RS37035 0.39 -0.8 1,680,524 - QEN71_RS37035 0.39 -1.3 1,680,913 + -0.8 1,680,914 - -1.3 1,680,968 - -1.1 1,680,968 - -1.1 1,681,081 + QEN71_RS37040 0.25 +0.1 1,681,081 + QEN71_RS37040 0.25 -0.4 1,681,082 - QEN71_RS37040 0.25 +0.2 1,681,082 - QEN71_RS37040 0.25 -0.6 1,681,087 + QEN71_RS37040 0.26 +0.6 1,681,088 - QEN71_RS37040 0.26 +0.3 1,681,210 + QEN71_RS37040 0.49 +0.2 1,681,211 - QEN71_RS37040 0.49 +0.5 1,681,345 + QEN71_RS37040 0.74 +0.3 1,681,345 + QEN71_RS37040 0.74 -3.3 1,681,346 - QEN71_RS37040 0.74 +1.0 1,681,346 - QEN71_RS37040 0.74 +1.2 1,681,351 + QEN71_RS37040 0.75 -2.3 1,681,352 - QEN71_RS37040 0.75 -0.2 1,681,352 - QEN71_RS37040 0.75 +0.4 1,681,633 + -0.8 1,681,634 - -0.4 1,681,659 + -0.5 1,681,660 - -0.7 1,681,660 - +1.4 1,681,678 + +0.2 1,681,680 + -0.1 1,681,681 - -1.4 1,681,681 - +1.3
Or see this region's nucleotide sequence