Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS34110 and QEN71_RS34115 are separated by 133 nucleotides QEN71_RS34115 and QEN71_RS34120 are separated by 14 nucleotides QEN71_RS34120 and QEN71_RS34125 are separated by 47 nucleotides
QEN71_RS34110: QEN71_RS34110 - LysR substrate-binding domain-containing protein, at 968,126 to 969,097
_RS34110
QEN71_RS34115: QEN71_RS34115 - class 1 fructose-bisphosphatase, at 969,231 to 970,373
_RS34115
QEN71_RS34120: QEN71_RS34120 - phosphoribulokinase, at 970,388 to 971,260
_RS34120
QEN71_RS34125: QEN71_RS34125 - phosphoglycolate phosphatase, at 971,308 to 972,075
_RS34125
Position (kb) 969
970
971 Strain fitness (log2 ratio) -2
-1
0
1 at 968.350 kb on + strand, within QEN71_RS34110 at 968.351 kb on - strand, within QEN71_RS34110 at 968.743 kb on - strand, within QEN71_RS34110 at 969.124 kb on - strand at 969.124 kb on - strand at 969.134 kb on + strand at 969.145 kb on + strand at 969.183 kb on - strand at 969.783 kb on + strand, within QEN71_RS34115 at 969.783 kb on + strand, within QEN71_RS34115 at 969.784 kb on - strand, within QEN71_RS34115 at 969.784 kb on - strand, within QEN71_RS34115 at 969.824 kb on + strand, within QEN71_RS34115 at 969.960 kb on + strand, within QEN71_RS34115 at 969.960 kb on + strand, within QEN71_RS34115 at 969.960 kb on + strand, within QEN71_RS34115 at 969.961 kb on - strand, within QEN71_RS34115 at 970.058 kb on + strand, within QEN71_RS34115 at 970.131 kb on + strand, within QEN71_RS34115 at 970.244 kb on + strand, within QEN71_RS34115 at 970.676 kb on + strand, within QEN71_RS34120 at 971.024 kb on - strand, within QEN71_RS34120 at 971.024 kb on - strand, within QEN71_RS34120
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 968,350 + QEN71_RS34110 0.23 -0.7 968,351 - QEN71_RS34110 0.23 -0.6 968,743 - QEN71_RS34110 0.63 +0.1 969,124 - -0.7 969,124 - +0.5 969,134 + +0.3 969,145 + +0.9 969,183 - -0.5 969,783 + QEN71_RS34115 0.48 -0.3 969,783 + QEN71_RS34115 0.48 +0.8 969,784 - QEN71_RS34115 0.48 +1.1 969,784 - QEN71_RS34115 0.48 +1.1 969,824 + QEN71_RS34115 0.52 +0.9 969,960 + QEN71_RS34115 0.64 -0.2 969,960 + QEN71_RS34115 0.64 +0.5 969,960 + QEN71_RS34115 0.64 +0.2 969,961 - QEN71_RS34115 0.64 -2.1 970,058 + QEN71_RS34115 0.72 -0.1 970,131 + QEN71_RS34115 0.79 +0.4 970,244 + QEN71_RS34115 0.89 -0.4 970,676 + QEN71_RS34120 0.33 -1.0 971,024 - QEN71_RS34120 0.73 -1.3 971,024 - QEN71_RS34120 0.73 -0.5
Or see this region's nucleotide sequence