Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33985 and QEN71_RS33990 overlap by 23 nucleotides QEN71_RS33990 and QEN71_RS33995 are separated by 11 nucleotides QEN71_RS33995 and QEN71_RS34000 are separated by 47 nucleotides
QEN71_RS33985: QEN71_RS33985 - phosphoenolpyruvate carboxylase, at 940,280 to 943,192
_RS33985
QEN71_RS33990: QEN71_RS33990 - succinate--CoA ligase subunit alpha, at 943,170 to 944,075
_RS33990
QEN71_RS33995: QEN71_RS33995 - malate--CoA ligase subunit beta, at 944,087 to 945,274
_RS33995
QEN71_RS34000: QEN71_RS34000 - D-2-hydroxyacid dehydrogenase, at 945,322 to 946,278
_RS34000
Position (kb) 944
945
946 Strain fitness (log2 ratio) -2
-1
0
1
2 at 943.192 kb on + strand at 943.192 kb on + strand at 943.193 kb on - strand at 943.258 kb on + strand at 943.258 kb on + strand at 943.259 kb on - strand at 943.637 kb on - strand, within QEN71_RS33990 at 943.637 kb on - strand, within QEN71_RS33990 at 943.641 kb on - strand, within QEN71_RS33990 at 943.641 kb on - strand, within QEN71_RS33990 at 943.846 kb on + strand, within QEN71_RS33990 at 943.846 kb on + strand, within QEN71_RS33990 at 944.323 kb on + strand, within QEN71_RS33995 at 944.520 kb on + strand, within QEN71_RS33995 at 944.520 kb on + strand, within QEN71_RS33995 at 944.520 kb on + strand, within QEN71_RS33995 at 944.521 kb on - strand, within QEN71_RS33995 at 944.521 kb on - strand, within QEN71_RS33995 at 944.949 kb on + strand, within QEN71_RS33995 at 944.985 kb on + strand, within QEN71_RS33995 at 944.985 kb on + strand, within QEN71_RS33995 at 944.986 kb on - strand, within QEN71_RS33995 at 944.986 kb on - strand, within QEN71_RS33995 at 944.986 kb on - strand, within QEN71_RS33995 at 945.078 kb on + strand, within QEN71_RS33995 at 945.079 kb on - strand, within QEN71_RS33995 at 945.079 kb on - strand, within QEN71_RS33995 at 945.178 kb on - strand at 945.199 kb on - strand at 945.199 kb on - strand at 945.280 kb on + strand at 945.280 kb on + strand at 945.281 kb on - strand at 945.299 kb on - strand at 945.714 kb on - strand, within QEN71_RS34000 at 945.714 kb on - strand, within QEN71_RS34000 at 945.714 kb on - strand, within QEN71_RS34000
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 943,192 + -0.3 943,192 + +0.6 943,193 - +0.0 943,258 + +0.3 943,258 + +0.7 943,259 - -0.3 943,637 - QEN71_RS33990 0.52 -1.3 943,637 - QEN71_RS33990 0.52 -0.5 943,641 - QEN71_RS33990 0.52 -0.9 943,641 - QEN71_RS33990 0.52 -0.4 943,846 + QEN71_RS33990 0.75 -1.5 943,846 + QEN71_RS33990 0.75 -0.7 944,323 + QEN71_RS33995 0.20 +1.9 944,520 + QEN71_RS33995 0.36 -0.8 944,520 + QEN71_RS33995 0.36 +0.0 944,520 + QEN71_RS33995 0.36 +0.1 944,521 - QEN71_RS33995 0.37 -0.9 944,521 - QEN71_RS33995 0.37 +0.1 944,949 + QEN71_RS33995 0.73 +1.1 944,985 + QEN71_RS33995 0.76 -1.6 944,985 + QEN71_RS33995 0.76 +1.9 944,986 - QEN71_RS33995 0.76 -0.5 944,986 - QEN71_RS33995 0.76 +1.7 944,986 - QEN71_RS33995 0.76 -0.5 945,078 + QEN71_RS33995 0.83 -1.1 945,079 - QEN71_RS33995 0.84 +0.2 945,079 - QEN71_RS33995 0.84 -0.8 945,178 - +0.2 945,199 - -2.3 945,199 - -1.1 945,280 + +1.4 945,280 + -0.9 945,281 - +0.5 945,299 - -0.8 945,714 - QEN71_RS34000 0.41 +0.1 945,714 - QEN71_RS34000 0.41 -0.9 945,714 - QEN71_RS34000 0.41 -1.4
Or see this region's nucleotide sequence