Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS09835 and QEN71_RS09840 overlap by 4 nucleotides QEN71_RS09840 and QEN71_RS09845 are separated by 191 nucleotides QEN71_RS09845 and QEN71_RS09850 are separated by 36 nucleotides
QEN71_RS09835: QEN71_RS09835 - HAMP domain-containing sensor histidine kinase, at 2,193,374 to 2,194,885
_RS09835
QEN71_RS09840: QEN71_RS09840 - response regulator transcription factor, at 2,194,882 to 2,195,613
_RS09840
QEN71_RS09845: QEN71_RS09845 - peptide-methionine (R)-S-oxide reductase MsrB, at 2,195,805 to 2,196,347
_RS09845
QEN71_RS09850: QEN71_RS09850 - cytochrome c biogenesis protein DipZ, at 2,196,384 to 2,198,201
_RS09850
Position (kb)
2195
2196
2197 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2194.928 kb on + strand at 2195.028 kb on - strand, within QEN71_RS09840 at 2195.028 kb on - strand, within QEN71_RS09840 at 2195.042 kb on + strand, within QEN71_RS09840 at 2195.108 kb on + strand, within QEN71_RS09840 at 2195.108 kb on + strand, within QEN71_RS09840 at 2195.108 kb on + strand, within QEN71_RS09840 at 2195.108 kb on + strand, within QEN71_RS09840 at 2195.108 kb on + strand, within QEN71_RS09840 at 2195.287 kb on + strand, within QEN71_RS09840 at 2195.309 kb on + strand, within QEN71_RS09840 at 2195.309 kb on + strand, within QEN71_RS09840 at 2195.310 kb on - strand, within QEN71_RS09840 at 2195.385 kb on + strand, within QEN71_RS09840 at 2195.385 kb on + strand, within QEN71_RS09840 at 2195.386 kb on - strand, within QEN71_RS09840 at 2195.386 kb on - strand, within QEN71_RS09840 at 2195.386 kb on - strand, within QEN71_RS09840 at 2195.386 kb on - strand, within QEN71_RS09840 at 2195.386 kb on - strand, within QEN71_RS09840 at 2195.387 kb on + strand, within QEN71_RS09840 at 2195.388 kb on - strand, within QEN71_RS09840 at 2195.593 kb on + strand at 2195.593 kb on + strand at 2195.594 kb on - strand at 2195.641 kb on + strand at 2195.641 kb on + strand at 2195.641 kb on + strand at 2195.641 kb on + strand at 2195.642 kb on - strand at 2195.642 kb on - strand at 2195.642 kb on - strand at 2195.642 kb on - strand at 2195.663 kb on + strand at 2195.663 kb on + strand at 2195.663 kb on + strand at 2195.664 kb on - strand at 2195.664 kb on - strand at 2195.664 kb on - strand at 2195.664 kb on - strand at 2195.712 kb on - strand at 2195.720 kb on + strand at 2195.720 kb on + strand at 2195.725 kb on + strand at 2195.726 kb on - strand at 2195.726 kb on - strand at 2195.761 kb on + strand at 2195.761 kb on + strand at 2195.761 kb on + strand at 2195.761 kb on + strand at 2195.761 kb on + strand at 2195.761 kb on + strand at 2195.761 kb on + strand at 2195.762 kb on - strand at 2195.762 kb on - strand at 2195.762 kb on - strand at 2195.762 kb on - strand at 2195.762 kb on - strand at 2195.762 kb on - strand at 2195.868 kb on - strand, within QEN71_RS09845 at 2196.009 kb on + strand, within QEN71_RS09845 at 2196.010 kb on - strand, within QEN71_RS09845 at 2196.301 kb on - strand at 2196.301 kb on - strand at 2196.350 kb on + strand at 2196.350 kb on + strand at 2196.350 kb on + strand at 2196.350 kb on + strand at 2196.350 kb on + strand at 2196.351 kb on - strand at 2196.351 kb on - strand at 2196.351 kb on - strand at 2196.351 kb on - strand at 2196.354 kb on + strand at 2196.354 kb on + strand at 2196.354 kb on + strand at 2196.388 kb on + strand at 2196.389 kb on - strand at 2196.405 kb on + strand at 2196.405 kb on + strand at 2196.405 kb on + strand at 2196.406 kb on - strand at 2196.406 kb on - strand at 2196.592 kb on - strand, within QEN71_RS09850 at 2196.873 kb on + strand, within QEN71_RS09850 at 2197.118 kb on + strand, within QEN71_RS09850 at 2197.119 kb on - strand, within QEN71_RS09850 at 2197.119 kb on - strand, within QEN71_RS09850 at 2197.119 kb on - strand, within QEN71_RS09850 at 2197.172 kb on + strand, within QEN71_RS09850 at 2197.341 kb on + strand, within QEN71_RS09850 at 2197.342 kb on - strand, within QEN71_RS09850 at 2197.342 kb on - strand, within QEN71_RS09850
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,194,928 + -0.8 2,195,028 - QEN71_RS09840 0.20 -0.8 2,195,028 - QEN71_RS09840 0.20 +0.7 2,195,042 + QEN71_RS09840 0.22 -0.2 2,195,108 + QEN71_RS09840 0.31 -1.2 2,195,108 + QEN71_RS09840 0.31 +0.2 2,195,108 + QEN71_RS09840 0.31 +0.7 2,195,108 + QEN71_RS09840 0.31 -0.2 2,195,108 + QEN71_RS09840 0.31 +0.2 2,195,287 + QEN71_RS09840 0.55 -0.0 2,195,309 + QEN71_RS09840 0.58 -0.4 2,195,309 + QEN71_RS09840 0.58 +0.3 2,195,310 - QEN71_RS09840 0.58 -0.5 2,195,385 + QEN71_RS09840 0.69 +1.2 2,195,385 + QEN71_RS09840 0.69 -0.1 2,195,386 - QEN71_RS09840 0.69 -0.1 2,195,386 - QEN71_RS09840 0.69 +0.8 2,195,386 - QEN71_RS09840 0.69 +0.4 2,195,386 - QEN71_RS09840 0.69 -0.0 2,195,386 - QEN71_RS09840 0.69 +2.6 2,195,387 + QEN71_RS09840 0.69 +0.3 2,195,388 - QEN71_RS09840 0.69 -0.5 2,195,593 + +0.1 2,195,593 + +0.0 2,195,594 - -0.1 2,195,641 + -0.2 2,195,641 + +1.5 2,195,641 + -0.7 2,195,641 + +0.8 2,195,642 - -0.6 2,195,642 - -1.6 2,195,642 - +0.0 2,195,642 - +0.1 2,195,663 + +0.0 2,195,663 + -2.2 2,195,663 + -1.0 2,195,664 - -0.2 2,195,664 - -0.3 2,195,664 - +0.5 2,195,664 - +1.1 2,195,712 - +0.4 2,195,720 + -0.7 2,195,720 + +0.5 2,195,725 + -1.6 2,195,726 - -1.7 2,195,726 - +0.0 2,195,761 + +0.4 2,195,761 + -0.5 2,195,761 + -0.2 2,195,761 + -0.7 2,195,761 + -0.3 2,195,761 + -0.5 2,195,761 + -1.8 2,195,762 - -0.2 2,195,762 - -0.3 2,195,762 - -0.3 2,195,762 - +0.9 2,195,762 - -0.9 2,195,762 - -1.7 2,195,868 - QEN71_RS09845 0.12 -0.5 2,196,009 + QEN71_RS09845 0.38 +1.8 2,196,010 - QEN71_RS09845 0.38 -0.3 2,196,301 - +0.1 2,196,301 - -0.2 2,196,350 + -0.4 2,196,350 + -1.5 2,196,350 + +0.5 2,196,350 + +0.5 2,196,350 + -0.6 2,196,351 - -0.5 2,196,351 - -0.9 2,196,351 - -0.8 2,196,351 - -0.3 2,196,354 + -0.2 2,196,354 + +0.3 2,196,354 + +0.1 2,196,388 + +0.5 2,196,389 - +0.6 2,196,405 + -0.2 2,196,405 + +0.8 2,196,405 + +1.3 2,196,406 - +0.0 2,196,406 - -0.0 2,196,592 - QEN71_RS09850 0.11 -0.0 2,196,873 + QEN71_RS09850 0.27 +1.1 2,197,118 + QEN71_RS09850 0.40 -0.4 2,197,119 - QEN71_RS09850 0.40 +1.1 2,197,119 - QEN71_RS09850 0.40 +0.4 2,197,119 - QEN71_RS09850 0.40 +1.0 2,197,172 + QEN71_RS09850 0.43 -0.6 2,197,341 + QEN71_RS09850 0.53 -0.6 2,197,342 - QEN71_RS09850 0.53 -1.1 2,197,342 - QEN71_RS09850 0.53 +0.2
Or see this region's nucleotide sequence