Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS09650 and QEN71_RS09655 overlap by 22 nucleotides QEN71_RS09655 and QEN71_RS09660 are separated by 462 nucleotides QEN71_RS09660 and QEN71_RS09665 are separated by 400 nucleotides
QEN71_RS09650: QEN71_RS09650 - MFS transporter, at 2,154,835 to 2,156,076
_RS09650
QEN71_RS09655: QEN71_RS09655 - hypothetical protein, at 2,156,055 to 2,156,294
_RS09655
QEN71_RS09660: QEN71_RS09660 - NADP-dependent isocitrate dehydrogenase, at 2,156,757 to 2,159,000
_RS09660
QEN71_RS09665: QEN71_RS09665 - MBL fold metallo-hydrolase, at 2,159,401 to 2,160,537
_RS09665
Position (kb)
2156
2157
2158
2159
2160 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2155.922 kb on + strand, within QEN71_RS09650 at 2155.922 kb on + strand, within QEN71_RS09650 at 2155.923 kb on - strand, within QEN71_RS09650 at 2155.923 kb on - strand, within QEN71_RS09650 at 2155.923 kb on - strand, within QEN71_RS09650 at 2155.923 kb on - strand, within QEN71_RS09650 at 2156.486 kb on - strand at 2156.486 kb on - strand at 2156.486 kb on - strand at 2156.520 kb on + strand at 2156.520 kb on + strand at 2156.539 kb on - strand at 2156.712 kb on - strand at 2156.712 kb on - strand at 2156.712 kb on - strand at 2156.712 kb on - strand at 2156.712 kb on - strand at 2156.714 kb on + strand at 2156.715 kb on - strand at 2156.715 kb on - strand at 2156.734 kb on + strand at 2156.734 kb on + strand at 2156.734 kb on + strand at 2156.734 kb on + strand at 2156.734 kb on + strand at 2156.734 kb on + strand at 2156.735 kb on - strand at 2156.735 kb on - strand at 2156.743 kb on - strand at 2156.743 kb on - strand at 2156.743 kb on - strand at 2156.758 kb on + strand at 2156.758 kb on + strand at 2156.759 kb on - strand at 2156.759 kb on - strand at 2159.081 kb on - strand at 2159.081 kb on - strand at 2159.329 kb on + strand at 2159.330 kb on - strand at 2159.349 kb on + strand at 2159.349 kb on + strand at 2159.349 kb on + strand at 2159.349 kb on + strand at 2159.349 kb on + strand at 2159.349 kb on + strand at 2159.349 kb on + strand at 2159.350 kb on - strand at 2159.350 kb on - strand at 2159.350 kb on - strand at 2159.395 kb on + strand at 2159.395 kb on + strand at 2159.395 kb on + strand at 2159.395 kb on + strand at 2159.395 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.397 kb on + strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.398 kb on - strand at 2159.468 kb on - strand at 2159.554 kb on + strand, within QEN71_RS09665 at 2159.554 kb on + strand, within QEN71_RS09665 at 2159.650 kb on + strand, within QEN71_RS09665 at 2159.865 kb on + strand, within QEN71_RS09665 at 2159.866 kb on - strand, within QEN71_RS09665 at 2159.866 kb on - strand, within QEN71_RS09665 at 2159.896 kb on + strand, within QEN71_RS09665 at 2159.896 kb on + strand, within QEN71_RS09665 at 2159.896 kb on + strand, within QEN71_RS09665 at 2159.896 kb on + strand, within QEN71_RS09665 at 2159.896 kb on + strand, within QEN71_RS09665 at 2159.896 kb on + strand, within QEN71_RS09665 at 2159.897 kb on - strand, within QEN71_RS09665 at 2159.897 kb on - strand, within QEN71_RS09665 at 2159.897 kb on - strand, within QEN71_RS09665
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,155,922 + QEN71_RS09650 0.88 +1.2 2,155,922 + QEN71_RS09650 0.88 -1.7 2,155,923 - QEN71_RS09650 0.88 -1.1 2,155,923 - QEN71_RS09650 0.88 -0.0 2,155,923 - QEN71_RS09650 0.88 +0.8 2,155,923 - QEN71_RS09650 0.88 +0.0 2,156,486 - -0.8 2,156,486 - -0.2 2,156,486 - -0.4 2,156,520 + -2.0 2,156,520 + +0.4 2,156,539 - -0.1 2,156,712 - -1.4 2,156,712 - -0.6 2,156,712 - +0.5 2,156,712 - -0.1 2,156,712 - -0.4 2,156,714 + -0.4 2,156,715 - +0.6 2,156,715 - -0.2 2,156,734 + -0.8 2,156,734 + -0.3 2,156,734 + +1.2 2,156,734 + +1.7 2,156,734 + +0.8 2,156,734 + -0.0 2,156,735 - -0.2 2,156,735 - -0.9 2,156,743 - +0.1 2,156,743 - -0.2 2,156,743 - -0.7 2,156,758 + -0.8 2,156,758 + -1.0 2,156,759 - -0.0 2,156,759 - -0.1 2,159,081 - -0.2 2,159,081 - +0.5 2,159,329 + +1.0 2,159,330 - -0.1 2,159,349 + +0.6 2,159,349 + -0.4 2,159,349 + -0.9 2,159,349 + -0.5 2,159,349 + +0.8 2,159,349 + +0.0 2,159,349 + +0.1 2,159,350 - +0.2 2,159,350 - +1.4 2,159,350 - -1.6 2,159,395 + -0.2 2,159,395 + -2.1 2,159,395 + -1.2 2,159,395 + -0.5 2,159,395 + +0.3 2,159,397 + +0.2 2,159,397 + -0.2 2,159,397 + +1.4 2,159,397 + +0.5 2,159,397 + -0.5 2,159,397 + -2.5 2,159,397 + -0.8 2,159,397 + -0.9 2,159,397 + -1.7 2,159,397 + -0.3 2,159,397 + +0.1 2,159,397 + -0.2 2,159,397 + -1.6 2,159,398 - -0.7 2,159,398 - -0.4 2,159,398 - -0.5 2,159,398 - -0.9 2,159,398 - -1.2 2,159,398 - -0.1 2,159,398 - -1.5 2,159,398 - -0.1 2,159,398 - +0.1 2,159,398 - -0.2 2,159,398 - +0.3 2,159,398 - +0.2 2,159,398 - -0.0 2,159,398 - -0.3 2,159,398 - -0.2 2,159,468 - -1.2 2,159,554 + QEN71_RS09665 0.13 -0.4 2,159,554 + QEN71_RS09665 0.13 +0.2 2,159,650 + QEN71_RS09665 0.22 +0.2 2,159,865 + QEN71_RS09665 0.41 -0.9 2,159,866 - QEN71_RS09665 0.41 -0.8 2,159,866 - QEN71_RS09665 0.41 -0.8 2,159,896 + QEN71_RS09665 0.44 -0.9 2,159,896 + QEN71_RS09665 0.44 -0.3 2,159,896 + QEN71_RS09665 0.44 -0.2 2,159,896 + QEN71_RS09665 0.44 +0.3 2,159,896 + QEN71_RS09665 0.44 +1.8 2,159,896 + QEN71_RS09665 0.44 -1.0 2,159,897 - QEN71_RS09665 0.44 -0.8 2,159,897 - QEN71_RS09665 0.44 +2.0 2,159,897 - QEN71_RS09665 0.44 -0.6
Or see this region's nucleotide sequence