Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS03310

Experiment: L-Leucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS03305 and QEN71_RS03310 are separated by 204 nucleotidesQEN71_RS03310 and QEN71_RS03315 are separated by 183 nucleotides QEN71_RS03305: QEN71_RS03305 - glutamate-1-semialdehyde 2,1-aminomutase, at 732,663 to 733,943 _RS03305 QEN71_RS03310: QEN71_RS03310 - hypothetical protein, at 734,148 to 734,792 _RS03310 QEN71_RS03315: QEN71_RS03315 - Bcr/CflA family multidrug efflux MFS transporter, at 734,976 to 736,187 _RS03315 Position (kb) 734 735Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 734.007 kb on - strandat 734.007 kb on - strandat 734.007 kb on - strandat 734.024 kb on - strandat 734.091 kb on + strandat 734.092 kb on - strandat 734.092 kb on - strandat 734.092 kb on - strandat 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.224 kb on + strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.225 kb on - strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.515 kb on + strand, within QEN71_RS03310at 734.516 kb on - strand, within QEN71_RS03310at 734.516 kb on - strand, within QEN71_RS03310at 734.516 kb on - strand, within QEN71_RS03310at 734.516 kb on - strand, within QEN71_RS03310at 734.521 kb on + strand, within QEN71_RS03310at 734.521 kb on + strand, within QEN71_RS03310at 734.522 kb on - strand, within QEN71_RS03310at 734.522 kb on - strand, within QEN71_RS03310at 734.522 kb on - strand, within QEN71_RS03310at 734.578 kb on + strand, within QEN71_RS03310at 734.596 kb on + strand, within QEN71_RS03310at 734.596 kb on + strand, within QEN71_RS03310at 734.596 kb on + strand, within QEN71_RS03310at 734.596 kb on + strand, within QEN71_RS03310at 734.596 kb on + strand, within QEN71_RS03310at 734.596 kb on + strand, within QEN71_RS03310at 734.888 kb on + strandat 734.888 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.062 kb on + strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.063 kb on - strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.066 kb on + strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.067 kb on - strandat 735.069 kb on - strandat 735.174 kb on + strand, within QEN71_RS03315at 735.174 kb on + strand, within QEN71_RS03315at 735.234 kb on + strand, within QEN71_RS03315at 735.234 kb on + strand, within QEN71_RS03315at 735.234 kb on + strand, within QEN71_RS03315at 735.234 kb on + strand, within QEN71_RS03315at 735.234 kb on + strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.235 kb on - strand, within QEN71_RS03315at 735.262 kb on + strand, within QEN71_RS03315at 735.454 kb on + strand, within QEN71_RS03315at 735.455 kb on - strand, within QEN71_RS03315at 735.455 kb on - strand, within QEN71_RS03315at 735.455 kb on - strand, within QEN71_RS03315at 735.455 kb on - strand, within QEN71_RS03315at 735.597 kb on + strand, within QEN71_RS03315at 735.597 kb on + strand, within QEN71_RS03315at 735.597 kb on + strand, within QEN71_RS03315at 735.598 kb on - strand, within QEN71_RS03315at 735.675 kb on + strand, within QEN71_RS03315at 735.675 kb on + strand, within QEN71_RS03315at 735.675 kb on + strand, within QEN71_RS03315at 735.675 kb on + strand, within QEN71_RS03315at 735.675 kb on + strand, within QEN71_RS03315at 735.675 kb on + strand, within QEN71_RS03315at 735.675 kb on + strand, within QEN71_RS03315at 735.676 kb on - strand, within QEN71_RS03315at 735.676 kb on - strand, within QEN71_RS03315at 735.676 kb on - strand, within QEN71_RS03315at 735.676 kb on - strand, within QEN71_RS03315at 735.676 kb on - strand, within QEN71_RS03315at 735.699 kb on + strand, within QEN71_RS03315at 735.699 kb on + strand, within QEN71_RS03315at 735.700 kb on - strand, within QEN71_RS03315at 735.700 kb on - strand, within QEN71_RS03315at 735.701 kb on + strand, within QEN71_RS03315at 735.701 kb on + strand, within QEN71_RS03315at 735.702 kb on - strand, within QEN71_RS03315at 735.702 kb on - strand, within QEN71_RS03315at 735.708 kb on + strand, within QEN71_RS03315at 735.709 kb on - strand, within QEN71_RS03315at 735.709 kb on - strand, within QEN71_RS03315at 735.732 kb on + strand, within QEN71_RS03315at 735.732 kb on + strand, within QEN71_RS03315at 735.732 kb on + strand, within QEN71_RS03315at 735.733 kb on - strand, within QEN71_RS03315

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (C)
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734,007 - -0.9
734,007 - -0.2
734,007 - -0.3
734,024 - +0.7
734,091 + -0.3
734,092 - +0.2
734,092 - -0.1
734,092 - +0.5
734,224 + QEN71_RS03310 0.12 +0.8
734,224 + QEN71_RS03310 0.12 -1.1
734,224 + QEN71_RS03310 0.12 -0.8
734,224 + QEN71_RS03310 0.12 -0.3
734,224 + QEN71_RS03310 0.12 -0.6
734,224 + QEN71_RS03310 0.12 -2.2
734,224 + QEN71_RS03310 0.12 -1.1
734,224 + QEN71_RS03310 0.12 +0.5
734,224 + QEN71_RS03310 0.12 -1.1
734,225 - QEN71_RS03310 0.12 -0.6
734,225 - QEN71_RS03310 0.12 +0.2
734,225 - QEN71_RS03310 0.12 +0.1
734,225 - QEN71_RS03310 0.12 -3.6
734,225 - QEN71_RS03310 0.12 +0.7
734,225 - QEN71_RS03310 0.12 -0.2
734,225 - QEN71_RS03310 0.12 -0.3
734,225 - QEN71_RS03310 0.12 -0.8
734,225 - QEN71_RS03310 0.12 -0.5
734,515 + QEN71_RS03310 0.57 +0.6
734,515 + QEN71_RS03310 0.57 -0.8
734,515 + QEN71_RS03310 0.57 +0.6
734,515 + QEN71_RS03310 0.57 -1.1
734,515 + QEN71_RS03310 0.57 +0.7
734,515 + QEN71_RS03310 0.57 -0.4
734,515 + QEN71_RS03310 0.57 +0.4
734,515 + QEN71_RS03310 0.57 -0.5
734,516 - QEN71_RS03310 0.57 -1.0
734,516 - QEN71_RS03310 0.57 +0.9
734,516 - QEN71_RS03310 0.57 +0.9
734,516 - QEN71_RS03310 0.57 -0.8
734,521 + QEN71_RS03310 0.58 -0.3
734,521 + QEN71_RS03310 0.58 +0.4
734,522 - QEN71_RS03310 0.58 -1.0
734,522 - QEN71_RS03310 0.58 -0.1
734,522 - QEN71_RS03310 0.58 -0.6
734,578 + QEN71_RS03310 0.67 -0.8
734,596 + QEN71_RS03310 0.69 -0.6
734,596 + QEN71_RS03310 0.69 +0.1
734,596 + QEN71_RS03310 0.69 +0.0
734,596 + QEN71_RS03310 0.69 +0.3
734,596 + QEN71_RS03310 0.69 -0.7
734,596 + QEN71_RS03310 0.69 +1.9
734,888 + -0.8
734,888 + -0.2
735,062 + -1.3
735,062 + +0.0
735,062 + +0.7
735,062 + +0.5
735,062 + +1.1
735,062 + -1.8
735,062 + -2.4
735,062 + +0.5
735,062 + +0.3
735,062 + +0.4
735,062 + -0.5
735,062 + -0.5
735,063 - -0.2
735,063 - -0.5
735,063 - +2.1
735,063 - -0.4
735,063 - +1.4
735,063 - -0.1
735,063 - +0.3
735,063 - +0.9
735,063 - -1.1
735,066 + -1.0
735,066 + -1.5
735,066 + -0.2
735,066 + -0.0
735,066 + -0.1
735,066 + +0.1
735,066 + -0.0
735,066 + -0.7
735,066 + -0.2
735,066 + -0.1
735,066 + -0.7
735,066 + -0.0
735,066 + +0.3
735,066 + +1.2
735,066 + -0.4
735,067 - -1.5
735,067 - -1.8
735,067 - +0.1
735,067 - -1.2
735,067 - +0.2
735,067 - -1.3
735,067 - -0.9
735,067 - -2.3
735,067 - -0.5
735,067 - +0.9
735,067 - +0.1
735,069 - -0.5
735,174 + QEN71_RS03315 0.16 -0.2
735,174 + QEN71_RS03315 0.16 +0.4
735,234 + QEN71_RS03315 0.21 -0.6
735,234 + QEN71_RS03315 0.21 -0.7
735,234 + QEN71_RS03315 0.21 -1.7
735,234 + QEN71_RS03315 0.21 +0.5
735,234 + QEN71_RS03315 0.21 -0.7
735,235 - QEN71_RS03315 0.21 -0.8
735,235 - QEN71_RS03315 0.21 +0.5
735,235 - QEN71_RS03315 0.21 -1.1
735,235 - QEN71_RS03315 0.21 -0.1
735,235 - QEN71_RS03315 0.21 -0.1
735,235 - QEN71_RS03315 0.21 -1.1
735,235 - QEN71_RS03315 0.21 -0.0
735,235 - QEN71_RS03315 0.21 -0.2
735,235 - QEN71_RS03315 0.21 +0.3
735,235 - QEN71_RS03315 0.21 -1.0
735,235 - QEN71_RS03315 0.21 -1.1
735,262 + QEN71_RS03315 0.24 -0.8
735,454 + QEN71_RS03315 0.39 +0.0
735,455 - QEN71_RS03315 0.40 +2.2
735,455 - QEN71_RS03315 0.40 +0.0
735,455 - QEN71_RS03315 0.40 +0.0
735,455 - QEN71_RS03315 0.40 -0.1
735,597 + QEN71_RS03315 0.51 +0.7
735,597 + QEN71_RS03315 0.51 -0.4
735,597 + QEN71_RS03315 0.51 +0.6
735,598 - QEN71_RS03315 0.51 -0.2
735,675 + QEN71_RS03315 0.58 +0.0
735,675 + QEN71_RS03315 0.58 +0.5
735,675 + QEN71_RS03315 0.58 -0.1
735,675 + QEN71_RS03315 0.58 -0.4
735,675 + QEN71_RS03315 0.58 -0.3
735,675 + QEN71_RS03315 0.58 +0.6
735,675 + QEN71_RS03315 0.58 -0.3
735,676 - QEN71_RS03315 0.58 -0.1
735,676 - QEN71_RS03315 0.58 +0.2
735,676 - QEN71_RS03315 0.58 +0.3
735,676 - QEN71_RS03315 0.58 +0.2
735,676 - QEN71_RS03315 0.58 -1.0
735,699 + QEN71_RS03315 0.60 -0.4
735,699 + QEN71_RS03315 0.60 -0.1
735,700 - QEN71_RS03315 0.60 -0.0
735,700 - QEN71_RS03315 0.60 -1.6
735,701 + QEN71_RS03315 0.60 -0.3
735,701 + QEN71_RS03315 0.60 -0.1
735,702 - QEN71_RS03315 0.60 -1.1
735,702 - QEN71_RS03315 0.60 -1.0
735,708 + QEN71_RS03315 0.60 +0.5
735,709 - QEN71_RS03315 0.60 +1.0
735,709 - QEN71_RS03315 0.60 -0.5
735,732 + QEN71_RS03315 0.62 +1.2
735,732 + QEN71_RS03315 0.62 +0.1
735,732 + QEN71_RS03315 0.62 -0.4
735,733 - QEN71_RS03315 0.62 +0.7

Or see this region's nucleotide sequence