Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04085

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
4,578,000	+		MIT1002_04084	0.18	+0.2
4,578,000	+		MIT1002_04084	0.18	+0.0
4,578,000	+		MIT1002_04084	0.18	+0.5
4,578,032	-		MIT1002_04084	0.21	+0.5
4,578,038	+		MIT1002_04084	0.22	+0.5
4,578,121	-		MIT1002_04084	0.31	+0.0
4,578,136	-		MIT1002_04084	0.33	+0.4
4,578,136	-		MIT1002_04084	0.33	-1.6
4,578,136	-		MIT1002_04084	0.33	-0.7
4,578,154	+		MIT1002_04084	0.35	-0.1
4,578,196	+		MIT1002_04084	0.40	+0.3
4,578,214	-		MIT1002_04084	0.42	+0.2
4,578,220	-		MIT1002_04084	0.43	+0.4
4,578,263	+		MIT1002_04084	0.48	+0.6
4,578,302	-		MIT1002_04084	0.52	+0.9
4,578,371	-		MIT1002_04084	0.60	-0.6
4,578,410	-		MIT1002_04084	0.65	-0.5
4,578,439	+		MIT1002_04084	0.68	+0.9
4,578,514	+		MIT1002_04084	0.77	+0.4
4,578,565	-		MIT1002_04084	0.83	-0.5
4,578,590	-		MIT1002_04084	0.86	-1.1
4,578,650	-				-0.9
4,578,720	-				-0.5
4,578,786	-				+0.5
4,578,794	+				-1.1
4,578,827	-				+1.1
4,578,829	+				-0.6
4,578,829	+				+0.4
4,578,837	-				+0.3
4,578,837	-				-0.0
4,578,885	+				+0.5
4,578,885	+				-1.8
4,578,885	+				+0.8
4,578,885	+				+0.2
4,578,966	+		MIT1002_04085	0.21	+0.9
4,578,966	+		MIT1002_04085	0.21	-0.1
4,579,028	-		MIT1002_04085	0.52	+1.5
4,579,105	-				+0.7
4,579,127	+				-0.1
4,579,127	+				+0.1
4,579,218	+				-0.4
4,579,303	-				+1.7
4,579,344	-				+0.0
4,579,349	-				+0.3
4,579,356	-				+1.1
4,579,356	-				+1.2
4,579,366	+				-0.2
4,579,366	+				-0.5
4,579,368	+				-0.3
4,579,376	-				+0.4
4,579,385	+				+1.0
4,579,385	+				+0.2
4,579,416	-				+1.5
4,579,521	+				-0.3
4,579,529	-				-0.3
4,579,724	+		MIT1002_04086	0.23	+0.4
4,579,731	+		MIT1002_04086	0.24	+0.2
4,579,845	-		MIT1002_04086	0.39	-1.3
4,579,881	-		MIT1002_04086	0.44	-0.2
4,579,895	+		MIT1002_04086	0.45	+1.0
4,579,897	+		MIT1002_04086	0.46	+0.8
4,579,905	-		MIT1002_04086	0.47	-1.4
4,579,971	-		MIT1002_04086	0.56	-1.4
4,579,971	-		MIT1002_04086	0.56	-0.4
4,579,971	-		MIT1002_04086	0.56	-1.2
4,579,971	-		MIT1002_04086	0.56	-0.1
4,579,971	-		MIT1002_04086	0.56	+0.1
4,580,016	+		MIT1002_04086	0.62	-0.1
4,580,025	+		MIT1002_04086	0.63	+0.6
4,580,033	-		MIT1002_04086	0.64	+1.5
4,580,080	+		MIT1002_04086	0.70	+0.3
4,580,101	-		MIT1002_04086	0.73	+2.3
4,580,122	-		MIT1002_04086	0.76	+1.1